RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 MAPK4P31152 587 aa17.44■□□□□ 0.38
USP42-207ENST00000521713 COL23A1Q86Y22 540 aaPredicted RBP17.44■□□□□ 0.38
USP42-207ENST00000521713 MB21D1Q8N884 522 aa17.44■□□□□ 0.38
USP42-207ENST00000521713 XXYLT1Q8NBI6 393 aa17.44■□□□□ 0.38
USP42-207ENST00000521713 N4BP2L2Q92802 583 aaPredicted RBP17.44■□□□□ 0.38
USP42-207ENST00000521713 TMEM260Q9NX78 707 aa17.44■□□□□ 0.38
USP42-207ENST00000521713 NRBP1Q9UHY1 535 aa17.44■□□□□ 0.38
USP42-207ENST00000521713 SCOCQ9UIL1 159 aa17.44■□□□□ 0.38
USP42-207ENST00000521713 ZNF148Q9UQR1 794 aa17.44■□□□□ 0.38
USP42-207ENST00000521713 PCDHA10Q9Y5I2 948 aa17.44■□□□□ 0.38
USP42-207ENST00000521713 SYNJ2BP-COX16A0A087WUM0 186 aa17.43■□□□□ 0.38
USP42-207ENST00000521713 SH3BP5O60239 455 aa17.43■□□□□ 0.38
USP42-207ENST00000521713 COG7P83436 770 aa17.43■□□□□ 0.38
USP42-207ENST00000521713 SWSAP1Q6NVH7 229 aa17.43■□□□□ 0.38
USP42-207ENST00000521713 DNAJC24Q6P3W2 148 aa17.43■□□□□ 0.38
USP42-207ENST00000521713 C11orf57Q6ZUT1 292 aaPredicted RBP17.43■□□□□ 0.38
USP42-207ENST00000521713 SPATA33Q96N06 139 aa17.43■□□□□ 0.38
USP42-207ENST00000521713 COX16Q9P0S2 106 aa17.43■□□□□ 0.38
USP42-207ENST00000521713 ADGRB1O14514 1584 aa17.43■□□□□ 0.38
USP42-207ENST00000521713 PPFIA2O75334 1257 aa17.43■□□□□ 0.38
USP42-207ENST00000521713 ANXA13P27216 316 aa17.43■□□□□ 0.38
USP42-207ENST00000521713 RASSF7Q02833 373 aa17.43■□□□□ 0.38
USP42-207ENST00000521713 ITKQ08881 620 aa17.43■□□□□ 0.38
USP42-207ENST00000521713 LRRC23Q53EV4 343 aaPredicted RBP17.43■□□□□ 0.38
USP42-207ENST00000521713 SIX6OS1Q8N1H7 587 aa17.43■□□□□ 0.38
USP42-207ENST00000521713 EPHA7Q15375 998 aa17.43■□□□□ 0.38
USP42-207ENST00000521713 SARM1Q6SZW1 724 aa17.43■□□□□ 0.38
USP42-207ENST00000521713 CTAGE3PQ8IX95 158 aa17.43■□□□□ 0.38
USP42-207ENST00000521713 OXER1Q8TDS5 423 aa17.43■□□□□ 0.38
USP42-207ENST00000521713 KCNH4Q9UQ05 1017 aa17.43■□□□□ 0.38
USP42-207ENST00000521713 EXOSC10Q01780 885 aaKnown RBP17.43■□□□□ 0.38
USP42-207ENST00000521713 CCDC13Q8IYE1 715 aa17.43■□□□□ 0.38
USP42-207ENST00000521713 FBXO41Q8TF61 875 aa17.43■□□□□ 0.38
USP42-207ENST00000521713 ZBED2Q9BTP6 218 aa17.43■□□□□ 0.38
USP42-207ENST00000521713 SKIP12755 728 aa17.42■□□□□ 0.38
USP42-207ENST00000521713 TWF2Q6IBS0 349 aaKnown RBP17.42■□□□□ 0.38
USP42-207ENST00000521713 ANKRD13CQ8N6S4 541 aa17.42■□□□□ 0.38
USP42-207ENST00000521713 MGARPQ8TDB4 240 aa17.42■□□□□ 0.38
USP42-207ENST00000521713 RILPQ96NA2 401 aa17.42■□□□□ 0.38
USP42-207ENST00000521713 KRT12Q99456 494 aa17.42■□□□□ 0.38
USP42-207ENST00000521713 PPP4CP60510 307 aa17.42■□□□□ 0.38
USP42-207ENST00000521713 IL9RQ01113 521 aa17.42■□□□□ 0.38
USP42-207ENST00000521713 CUL4BQ13620 913 aa17.42■□□□□ 0.38
USP42-207ENST00000521713 CASP8Q14790 479 aa17.42■□□□□ 0.38
USP42-207ENST00000521713 DEFB129Q9H1M3 183 aa17.42■□□□□ 0.38
USP42-207ENST00000521713 WDR70Q9NW82 654 aa17.42■□□□□ 0.38
USP42-207ENST00000521713 H7C0C1 242 aa17.42■□□□□ 0.38
USP42-207ENST00000521713 RGL2O15211 777 aa17.42■□□□□ 0.38
USP42-207ENST00000521713 ATP5OP48047 213 aa17.42■□□□□ 0.38
USP42-207ENST00000521713 SFR1Q86XK3 245 aa17.42■□□□□ 0.38
USP42-207ENST00000521713 PDLIM2Q96JY6 352 aa17.42■□□□□ 0.38
USP42-207ENST00000521713 SLC38A10Q9HBR0 1119 aa17.42■□□□□ 0.38
USP42-207ENST00000521713 TXLNGQ9NUQ3 528 aa17.42■□□□□ 0.38
USP42-207ENST00000521713 GOLGA8IPA6NC78 632 aa17.42■□□□□ 0.38
USP42-207ENST00000521713 GOLGA8JA6NMD2 632 aa17.42■□□□□ 0.38
USP42-207ENST00000521713 GUCY2CP25092 1073 aa17.42■□□□□ 0.38
USP42-207ENST00000521713 STAG2Q8N3U4 1231 aa17.42■□□□□ 0.38
USP42-207ENST00000521713 MORC2Q9Y6X9 1032 aaPredicted RBP17.42■□□□□ 0.38
USP42-207ENST00000521713 FAM170AA1A519 330 aa17.41■□□□□ 0.38
USP42-207ENST00000521713 SFI1A8K8P3 1242 aa17.41■□□□□ 0.38
USP42-207ENST00000521713 HMGB1P1B2RPK0 211 aaPredicted RBP17.41■□□□□ 0.38
USP42-207ENST00000521713 CTNND1O60716 968 aaKnown RBP17.41■□□□□ 0.38
USP42-207ENST00000521713 ZNF157P51786 506 aaPredicted RBP17.41■□□□□ 0.38
USP42-207ENST00000521713 GUCY2DQ02846 1103 aa17.41■□□□□ 0.38
USP42-207ENST00000521713 PDE1CQ14123 709 aaPredicted RBP17.41■□□□□ 0.38
USP42-207ENST00000521713 ANKRD13AQ8IZ07 590 aa17.41■□□□□ 0.38
USP42-207ENST00000521713 WHAMMQ8TF30 809 aa17.41■□□□□ 0.38
USP42-207ENST00000521713 SAMSN1Q9NSI8 373 aaKnown RBP17.41■□□□□ 0.38
USP42-207ENST00000521713 GOLGA8SH3BPF8 625 aa17.41■□□□□ 0.38
USP42-207ENST00000521713 GFPT2O94808 682 aa17.41■□□□□ 0.38
USP42-207ENST00000521713 PRPSAP1Q14558 356 aa17.41■□□□□ 0.38
USP42-207ENST00000521713 CFAP61Q8NHU2 1237 aa17.41■□□□□ 0.38
USP42-207ENST00000521713 E9PMD0 336 aa17.41■□□□□ 0.38
USP42-207ENST00000521713 ARPP19P56211 112 aa17.41■□□□□ 0.38
USP42-207ENST00000521713 EHHADHQ08426 723 aa17.41■□□□□ 0.38
USP42-207ENST00000521713 SRBD1Q8N5C6 995 aaKnown RBP17.41■□□□□ 0.38
USP42-207ENST00000521713 RAET1EQ8TD07 263 aa17.41■□□□□ 0.38
USP42-207ENST00000521713 HVCN1Q96D96 273 aa17.41■□□□□ 0.38
USP42-207ENST00000521713 GCOM2Q9BZD3 368 aaPredicted RBP17.41■□□□□ 0.38
USP42-207ENST00000521713 SLC9A2Q9UBY0 812 aa17.41■□□□□ 0.38
USP42-207ENST00000521713 SLC25A27O95847 323 aa17.41■□□□□ 0.38
USP42-207ENST00000521713 CD58P19256 250 aa17.41■□□□□ 0.38
USP42-207ENST00000521713 ARL4AP40617 200 aa17.41■□□□□ 0.38
USP42-207ENST00000521713 RBL2Q08999 1139 aa17.41■□□□□ 0.38
USP42-207ENST00000521713 ZNF568Q3ZCX4 644 aa17.41■□□□□ 0.38
USP42-207ENST00000521713 EMBQ6PCB8 327 aa17.41■□□□□ 0.38
USP42-207ENST00000521713 PPP4R1Q8TF05 950 aa17.41■□□□□ 0.38
USP42-207ENST00000521713 PASKQ96RG2 1323 aa17.4■□□□□ 0.38
USP42-207ENST00000521713 POTEB3A0JP26 581 aa17.4■□□□□ 0.38
USP42-207ENST00000521713 POTECB2RU33 542 aa17.4■□□□□ 0.38
USP42-207ENST00000521713 DNAJC8O75937 253 aaPredicted RBP17.4■□□□□ 0.38
USP42-207ENST00000521713 SERPING1P05155 500 aa17.4■□□□□ 0.38
USP42-207ENST00000521713 POTEBQ6S5H4 581 aa17.4■□□□□ 0.38
USP42-207ENST00000521713 RNF139Q8WU17 664 aa17.4■□□□□ 0.38
USP42-207ENST00000521713 KLHL29Q96CT2 875 aa17.4■□□□□ 0.38
USP42-207ENST00000521713 HEXIM2Q96MH2 286 aaKnown RBP17.4■□□□□ 0.38
USP42-207ENST00000521713 GCNAQ96QF7 691 aa17.4■□□□□ 0.38
USP42-207ENST00000521713 ZFYVE28Q9HCC9 887 aa17.4■□□□□ 0.38
USP42-207ENST00000521713 OR6B2Q6IFH4 312 aa17.4■□□□□ 0.38
USP42-207ENST00000521713 THEM5Q8N1Q8 247 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms