RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 DGKIO75912 1065 aa12.73□□□□□ -0.37
CSMD1-210ENST00000521646 GLP2RO95838 553 aa12.73□□□□□ -0.37
CSMD1-210ENST00000521646 TMEM62Q0P6H9 643 aa12.73□□□□□ -0.37
CSMD1-210ENST00000521646 PPFIA1Q13136 1202 aa12.73□□□□□ -0.37
CSMD1-210ENST00000521646 GNPTABQ3T906 1256 aa12.73□□□□□ -0.37
CSMD1-210ENST00000521646 LINC01559Q495D7 138 aa12.73□□□□□ -0.37
CSMD1-210ENST00000521646 TIGD5Q53EQ6 642 aa12.73□□□□□ -0.37
CSMD1-210ENST00000521646 EP400NLQ6ZTU2 488 aa12.73□□□□□ -0.37
CSMD1-210ENST00000521646 EHBP1Q8NDI1 1231 aa12.73□□□□□ -0.37
CSMD1-210ENST00000521646 NCOA7Q8NI08 942 aa12.73□□□□□ -0.37
CSMD1-210ENST00000521646 FAM117AQ9C073 453 aa12.73□□□□□ -0.37
CSMD1-210ENST00000521646 CLEC1BQ9P126 229 aa12.73□□□□□ -0.37
CSMD1-210ENST00000521646 MUTYHQ9UIF7 546 aa12.73□□□□□ -0.37
CSMD1-210ENST00000521646 RBM8AQ9Y5S9 174 aaKnown RBP12.73□□□□□ -0.37
CSMD1-210ENST00000521646 VPS13AQ96RL7 3174 aa12.72□□□□□ -0.37
CSMD1-210ENST00000521646 ST8SIA5O15466 376 aa12.72□□□□□ -0.37
CSMD1-210ENST00000521646 STAM2O75886 525 aa12.72□□□□□ -0.37
CSMD1-210ENST00000521646 ITGB1P05556 798 aa12.72□□□□□ -0.37
CSMD1-210ENST00000521646 INSRRP14616 1297 aa12.72□□□□□ -0.37
CSMD1-210ENST00000521646 IGBP1P78318 339 aa12.72□□□□□ -0.37
CSMD1-210ENST00000521646 ITGB3BPQ13352 177 aaPredicted RBP12.72□□□□□ -0.37
CSMD1-210ENST00000521646 SMAD2Q15796 467 aaKnown RBP12.72□□□□□ -0.37
CSMD1-210ENST00000521646 ADHFE1Q8IWW8 467 aa12.72□□□□□ -0.37
CSMD1-210ENST00000521646 CCDC82Q8N4S0 544 aa12.72□□□□□ -0.37
CSMD1-210ENST00000521646 FIBCD1Q8N539 461 aa12.72□□□□□ -0.37
CSMD1-210ENST00000521646 VN1R2Q8NFZ6 395 aa12.72□□□□□ -0.37
CSMD1-210ENST00000521646 SMARCC2Q8TAQ2 1214 aa12.72□□□□□ -0.37
CSMD1-210ENST00000521646 APBB2Q92870 758 aa12.72□□□□□ -0.37
CSMD1-210ENST00000521646 MSLNLQ96KJ4 702 aa12.72□□□□□ -0.37
CSMD1-210ENST00000521646 FBXL18Q96ME1 805 aa12.72□□□□□ -0.37
CSMD1-210ENST00000521646 SAMD11Q96NU1 681 aa12.72□□□□□ -0.37
CSMD1-210ENST00000521646 LSG1Q9H089 658 aaKnown RBP12.72□□□□□ -0.37
CSMD1-210ENST00000521646 FAM49AQ9H0Q0 323 aaPredicted RBP12.72□□□□□ -0.37
CSMD1-210ENST00000521646 TUBE1Q9UJT0 475 aa12.72□□□□□ -0.37
CSMD1-210ENST00000521646 PLAGL2Q9UPG8 496 aa12.72□□□□□ -0.37
CSMD1-210ENST00000521646 J3QL48 77 aa12.71□□□□□ -0.37
CSMD1-210ENST00000521646 DCXO43602 365 aa12.71□□□□□ -0.37
CSMD1-210ENST00000521646 PRC1O43663 620 aa12.71□□□□□ -0.37
CSMD1-210ENST00000521646 ARP10275 920 aa12.71□□□□□ -0.37
CSMD1-210ENST00000521646 SH3BP2P78314 561 aa12.71□□□□□ -0.37
CSMD1-210ENST00000521646 IRX6P78412 446 aaPredicted RBP12.71□□□□□ -0.37
CSMD1-210ENST00000521646 NHLH1Q02575 133 aa12.71□□□□□ -0.37
CSMD1-210ENST00000521646 AAMPQ13685 434 aa12.71□□□□□ -0.37
CSMD1-210ENST00000521646 PTPROQ16827 1216 aa12.71□□□□□ -0.37
CSMD1-210ENST00000521646 TMEM266Q2M3C6 531 aa12.71□□□□□ -0.37
CSMD1-210ENST00000521646 CATIPQ7Z7H3 387 aa12.71□□□□□ -0.37
CSMD1-210ENST00000521646 SPPL3Q8TCT6 385 aa12.71□□□□□ -0.37
CSMD1-210ENST00000521646 TMEM40Q8WWA1 233 aa12.71□□□□□ -0.37
CSMD1-210ENST00000521646 GPRASP2Q96D09 838 aa12.71□□□□□ -0.37
CSMD1-210ENST00000521646 UIMC1Q96RL1 719 aa12.71□□□□□ -0.37
CSMD1-210ENST00000521646 AAASQ9NRG9 546 aa12.71□□□□□ -0.37
CSMD1-210ENST00000521646 FNDC1Q4ZHG4 1894 aaPredicted RBP12.71□□□□□ -0.37
CSMD1-210ENST00000521646 ZBTB42B2RXF5 422 aa12.7□□□□□ -0.38
CSMD1-210ENST00000521646 DDAH1O94760 285 aa12.7□□□□□ -0.38
CSMD1-210ENST00000521646 CCNE2O96020 404 aa12.7□□□□□ -0.38
CSMD1-210ENST00000521646 MMP1P03956 469 aa12.7□□□□□ -0.38
CSMD1-210ENST00000521646 MRPS6P82932 125 aaKnown RBP12.7□□□□□ -0.38
CSMD1-210ENST00000521646 TRDNQ13061 729 aa12.7□□□□□ -0.38
CSMD1-210ENST00000521646 ADAM15Q13444 863 aa12.7□□□□□ -0.38
CSMD1-210ENST00000521646 PLCB4Q15147 1175 aa12.7□□□□□ -0.38
CSMD1-210ENST00000521646 PAN2Q504Q3 1202 aaKnown RBP12.7□□□□□ -0.38
CSMD1-210ENST00000521646 WWC2Q6AWC2 1192 aa12.7□□□□□ -0.38
CSMD1-210ENST00000521646 TSHZ1Q6ZSZ6 1077 aa12.7□□□□□ -0.38
CSMD1-210ENST00000521646 RALYLQ86SE5 291 aaKnown RBP12.7□□□□□ -0.38
CSMD1-210ENST00000521646 FEZF2Q8TBJ5 459 aa12.7□□□□□ -0.38
CSMD1-210ENST00000521646 SEPT1Q8WYJ6 367 aa12.7□□□□□ -0.38
CSMD1-210ENST00000521646 RRP36Q96EU6 259 aaKnown RBP12.7□□□□□ -0.38
CSMD1-210ENST00000521646 MAP3K14Q99558 947 aa12.7□□□□□ -0.38
CSMD1-210ENST00000521646 IGFLR1Q9H665 355 aa12.7□□□□□ -0.38
CSMD1-210ENST00000521646 PSTPIP2Q9H939 334 aa12.7□□□□□ -0.38
CSMD1-210ENST00000521646 JADE2Q9NQC1 790 aa12.7□□□□□ -0.38
CSMD1-210ENST00000521646 TMEM260Q9NX78 707 aa12.7□□□□□ -0.38
CSMD1-210ENST00000521646 ZNF215Q9UL58 517 aaPredicted RBP12.7□□□□□ -0.38
CSMD1-210ENST00000521646 PCDHA6Q9UN73 950 aa12.7□□□□□ -0.38
CSMD1-210ENST00000521646 PCDHA8Q9Y5H6 950 aa12.7□□□□□ -0.38
CSMD1-210ENST00000521646 CNTNAP5Q8WYK1 1306 aa12.69□□□□□ -0.38
CSMD1-210ENST00000521646 ZDBF2Q9HCK1 2354 aa12.69□□□□□ -0.38
CSMD1-210ENST00000521646 SLC27A2O14975 620 aa12.69□□□□□ -0.38
CSMD1-210ENST00000521646 AXIN1O15169 862 aa12.69□□□□□ -0.38
CSMD1-210ENST00000521646 GNAT1P11488 350 aa12.69□□□□□ -0.38
CSMD1-210ENST00000521646 ATP4AP20648 1035 aa12.69□□□□□ -0.38
CSMD1-210ENST00000521646 MTMR1Q13613 665 aa12.69□□□□□ -0.38
CSMD1-210ENST00000521646 BTG3Q14201 252 aaPredicted RBP12.69□□□□□ -0.38
CSMD1-210ENST00000521646 TAF2Q6P1X5 1199 aa12.69□□□□□ -0.38
CSMD1-210ENST00000521646 XRRA1Q6P2D8 792 aa12.69□□□□□ -0.38
CSMD1-210ENST00000521646 TMTC3Q6ZXV5 915 aa12.69□□□□□ -0.38
CSMD1-210ENST00000521646 RNF135Q8IUD6 432 aa12.69□□□□□ -0.38
CSMD1-210ENST00000521646 KLHL23Q8NBE8 558 aa12.69□□□□□ -0.38
CSMD1-210ENST00000521646 TCEANC2Q96MN5 208 aa12.69□□□□□ -0.38
CSMD1-210ENST00000521646 KCNH7Q9NS40 1196 aa12.69□□□□□ -0.38
CSMD1-210ENST00000521646 ERAP1Q9NZ08 941 aa12.69□□□□□ -0.38
CSMD1-210ENST00000521646 CDH22Q9UJ99 828 aa12.69□□□□□ -0.38
CSMD1-210ENST00000521646 PADI3Q9ULW8 664 aa12.69□□□□□ -0.38
CSMD1-210ENST00000521646 BARX2Q9UMQ3 279 aaPredicted RBP12.69□□□□□ -0.38
CSMD1-210ENST00000521646 KMT2EQ8IZD2 1858 aa12.69□□□□□ -0.38
CSMD1-210ENST00000521646 IGSF9BQ9UPX0 1349 aa12.68□□□□□ -0.38
CSMD1-210ENST00000521646 ERICH2A1L162 156 aa12.68□□□□□ -0.38
CSMD1-210ENST00000521646 AVPP01185 164 aa12.68□□□□□ -0.38
CSMD1-210ENST00000521646 RB1P06400 928 aa12.68□□□□□ -0.38
CSMD1-210ENST00000521646 SMARCA1P28370 1054 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms