RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 CEBPZQ03701 1054 aaKnown RBP12.22□□□□□ -0.45
MRPS28-208ENST00000521605 TRAF1Q13077 416 aa12.22□□□□□ -0.45
MRPS28-208ENST00000521605 NR5A1Q13285 461 aa12.22□□□□□ -0.45
MRPS28-208ENST00000521605 SLC35G1Q2M3R5 365 aa12.22□□□□□ -0.45
MRPS28-208ENST00000521605 HS1BP3Q53T59 392 aa12.22□□□□□ -0.45
MRPS28-208ENST00000521605 SYDE2Q5VT97 1194 aa12.22□□□□□ -0.45
MRPS28-208ENST00000521605 MCTP2Q6DN12 878 aa12.22□□□□□ -0.45
MRPS28-208ENST00000521605 BLIDQ8IZY5 108 aa12.22□□□□□ -0.45
MRPS28-208ENST00000521605 CCDC82Q8N4S0 544 aa12.22□□□□□ -0.45
MRPS28-208ENST00000521605 DNERQ8NFT8 737 aa12.22□□□□□ -0.45
MRPS28-208ENST00000521605 MSLNLQ96KJ4 702 aa12.22□□□□□ -0.45
MRPS28-208ENST00000521605 GOLPH3LQ9H4A5 285 aa12.22□□□□□ -0.45
MRPS28-208ENST00000521605 SEC63Q9UGP8 760 aaKnown RBP12.22□□□□□ -0.45
MRPS28-208ENST00000521605 USP25Q9UHP3 1055 aa12.22□□□□□ -0.45
MRPS28-208ENST00000521605 FBXO2Q9UK22 296 aaPredicted RBP12.22□□□□□ -0.45
MRPS28-208ENST00000521605 USP15Q9Y4E8 981 aaPredicted RBP12.22□□□□□ -0.45
MRPS28-208ENST00000521605 PTPRZ1P23471 2315 aaPredicted RBP12.21□□□□□ -0.45
MRPS28-208ENST00000521605 GALR2O43603 387 aaPredicted RBP12.21□□□□□ -0.45
MRPS28-208ENST00000521605 EYA4O95677 639 aa12.21□□□□□ -0.45
MRPS28-208ENST00000521605 F2P00734 622 aa12.21□□□□□ -0.45
MRPS28-208ENST00000521605 RB1P06400 928 aa12.21□□□□□ -0.45
MRPS28-208ENST00000521605 BMPR1AP36894 532 aa12.21□□□□□ -0.45
MRPS28-208ENST00000521605 ATP2C1P98194 919 aaPredicted RBP12.21□□□□□ -0.45
MRPS28-208ENST00000521605 WWC2Q6AWC2 1192 aa12.21□□□□□ -0.45
MRPS28-208ENST00000521605 KRT25Q7Z3Z0 450 aa12.21□□□□□ -0.45
MRPS28-208ENST00000521605 ADGRD2Q7Z7M1 963 aa12.21□□□□□ -0.45
MRPS28-208ENST00000521605 ZBTB33Q86T24 672 aa12.21□□□□□ -0.45
MRPS28-208ENST00000521605 FAM200AQ8TCP9 573 aa12.21□□□□□ -0.45
MRPS28-208ENST00000521605 OXER1Q8TDS5 423 aa12.21□□□□□ -0.45
MRPS28-208ENST00000521605 C6orf50Q9HD87 102 aa12.21□□□□□ -0.45
MRPS28-208ENST00000521605 CLEC1BQ9P126 229 aa12.21□□□□□ -0.45
MRPS28-208ENST00000521605 BARX2Q9UMQ3 279 aaPredicted RBP12.21□□□□□ -0.45
MRPS28-208ENST00000521605 VPS13AQ96RL7 3174 aa12.21□□□□□ -0.46
MRPS28-208ENST00000521605 CACNA1HO95180 2353 aa12.2□□□□□ -0.46
MRPS28-208ENST00000521605 PNMA6FA0A0J9YX94 578 aa12.2□□□□□ -0.46
MRPS28-208ENST00000521605 C5orf67F2Z3F1 127 aa12.2□□□□□ -0.46
MRPS28-208ENST00000521605 HAS3O00219 553 aa12.2□□□□□ -0.46
MRPS28-208ENST00000521605 KRT37O76014 449 aa12.2□□□□□ -0.46
MRPS28-208ENST00000521605 NDUFA8P51970 172 aa12.2□□□□□ -0.46
MRPS28-208ENST00000521605 TYRO3Q06418 890 aa12.2□□□□□ -0.46
MRPS28-208ENST00000521605 CBX2Q14781 532 aaPredicted RBP12.2□□□□□ -0.46
MRPS28-208ENST00000521605 USH1GQ495M9 461 aa12.2□□□□□ -0.46
MRPS28-208ENST00000521605 KANK3Q6NY19 840 aa12.2□□□□□ -0.46
MRPS28-208ENST00000521605 SASS6Q6UVJ0 657 aa12.2□□□□□ -0.46
MRPS28-208ENST00000521605 BTNL9Q6UXG8 535 aa12.2□□□□□ -0.46
MRPS28-208ENST00000521605 FRMD5Q7Z6J6 570 aa12.2□□□□□ -0.46
MRPS28-208ENST00000521605 RBM23Q86U06 439 aaKnown RBP12.2□□□□□ -0.46
MRPS28-208ENST00000521605 SERINC5Q86VE9 423 aa12.2□□□□□ -0.46
MRPS28-208ENST00000521605 ADSSL1Q8N142 457 aa12.2□□□□□ -0.46
MRPS28-208ENST00000521605 SMRP1Q8NCR6 262 aa12.2□□□□□ -0.46
MRPS28-208ENST00000521605 NKD2Q969F2 451 aaPredicted RBP12.2□□□□□ -0.46
MRPS28-208ENST00000521605 CCDC34Q96HJ3 373 aa12.2□□□□□ -0.46
MRPS28-208ENST00000521605 FAM13BQ9NYF5 915 aa12.2□□□□□ -0.46
MRPS28-208ENST00000521605 HOOK1Q9UJC3 728 aaKnown RBP12.2□□□□□ -0.46
MRPS28-208ENST00000521605 ADGRA3Q8IWK6 1321 aa12.19□□□□□ -0.46
MRPS28-208ENST00000521605 MED19A0JLT2 244 aaPredicted RBP12.19□□□□□ -0.46
MRPS28-208ENST00000521605 ZNF202O95125 648 aa12.19□□□□□ -0.46
MRPS28-208ENST00000521605 PFKFB1P16118 471 aa12.19□□□□□ -0.46
MRPS28-208ENST00000521605 SP100P23497 879 aaPredicted RBP12.19□□□□□ -0.46
MRPS28-208ENST00000521605 PRPHP41219 470 aa12.19□□□□□ -0.46
MRPS28-208ENST00000521605 NBL1P41271 181 aa12.19□□□□□ -0.46
MRPS28-208ENST00000521605 SYKP43405 635 aa12.19□□□□□ -0.46
MRPS28-208ENST00000521605 NRIP1P48552 1158 aa12.19□□□□□ -0.46
MRPS28-208ENST00000521605 SEMA3FQ13275 785 aa12.19□□□□□ -0.46
MRPS28-208ENST00000521605 CAMK1Q14012 370 aa12.19□□□□□ -0.46
MRPS28-208ENST00000521605 PTPN21Q16825 1174 aa12.19□□□□□ -0.46
MRPS28-208ENST00000521605 TTC38Q5R3I4 469 aa12.19□□□□□ -0.46
MRPS28-208ENST00000521605 SHC4Q6S5L8 630 aa12.19□□□□□ -0.46
MRPS28-208ENST00000521605 ATP6V0A1Q93050 837 aa12.19□□□□□ -0.46
MRPS28-208ENST00000521605 PPP2R3CQ969Q6 453 aa12.19□□□□□ -0.46
MRPS28-208ENST00000521605 PHF7Q9BWX1 381 aaPredicted RBP12.19□□□□□ -0.46
MRPS28-208ENST00000521605 ANO10Q9NW15 660 aa12.19□□□□□ -0.46
MRPS28-208ENST00000521605 DDX41Q9UJV9 622 aaKnown RBP12.19□□□□□ -0.46
MRPS28-208ENST00000521605 RWDD3Q9Y3V2 267 aa12.19□□□□□ -0.46
MRPS28-208ENST00000521605 ZBTB5O15062 677 aa12.18□□□□□ -0.46
MRPS28-208ENST00000521605 LINC00271P0C7V0 271 aa12.18□□□□□ -0.46
MRPS28-208ENST00000521605 DNAJB1P25685 340 aa12.18□□□□□ -0.46
MRPS28-208ENST00000521605 ICAM3P32942 547 aa12.18□□□□□ -0.46
MRPS28-208ENST00000521605 COASYQ13057 564 aa12.18□□□□□ -0.46
MRPS28-208ENST00000521605 BTG3Q14201 252 aaPredicted RBP12.18□□□□□ -0.46
MRPS28-208ENST00000521605 STXBP2Q15833 593 aa12.18□□□□□ -0.46
MRPS28-208ENST00000521605 STX1AQ16623 288 aa12.18□□□□□ -0.46
MRPS28-208ENST00000521605 CT47A1Q5JQC4 288 aaPredicted RBP12.18□□□□□ -0.46
MRPS28-208ENST00000521605 TYW1BQ6NUM6 668 aa12.18□□□□□ -0.46
MRPS28-208ENST00000521605 HEATR3Q7Z4Q2 680 aa12.18□□□□□ -0.46
MRPS28-208ENST00000521605 EFHBQ8N7U6 833 aa12.18□□□□□ -0.46
MRPS28-208ENST00000521605 TBC1D5Q92609 795 aa12.18□□□□□ -0.46
MRPS28-208ENST00000521605 RIPOR3Q96MK2 946 aa12.18□□□□□ -0.46
MRPS28-208ENST00000521605 TAAR1Q96RJ0 339 aa12.18□□□□□ -0.46
MRPS28-208ENST00000521605 NAP1L4Q99733 375 aaKnown RBP12.18□□□□□ -0.46
MRPS28-208ENST00000521605 BPIFA3Q9BQP9 254 aa12.18□□□□□ -0.46
MRPS28-208ENST00000521605 KIAA1468Q9P260 1216 aa12.18□□□□□ -0.46
MRPS28-208ENST00000521605 TUBE1Q9UJT0 475 aa12.18□□□□□ -0.46
MRPS28-208ENST00000521605 PCDHB6Q9Y5E3 794 aa12.18□□□□□ -0.46
MRPS28-208ENST00000521605 MRVI1Q9Y6F6 885 aa12.18□□□□□ -0.46
MRPS28-208ENST00000521605 CCDC194A0A1B0GVG4 234 aa12.17□□□□□ -0.46
MRPS28-208ENST00000521605 A0A1B0GVL5 298 aa12.17□□□□□ -0.46
MRPS28-208ENST00000521605 C17orf102A2RUQ5 167 aa12.17□□□□□ -0.46
MRPS28-208ENST00000521605 TREHO43280 583 aa12.17□□□□□ -0.46
MRPS28-208ENST00000521605 GLP2RO95838 553 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms