RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 ODR4Q5SWX8 454 aa19.19■□□□□ 0.66
SQLE-205ENST00000521232 TMEM192Q8IY95 271 aa19.19■□□□□ 0.66
SQLE-205ENST00000521232 SYMPKQ92797 1274 aaKnown RBP19.19■□□□□ 0.66
SQLE-205ENST00000521232 HAS1Q92839 578 aa19.19■□□□□ 0.66
SQLE-205ENST00000521232 VAV3Q9UKW4 847 aa19.19■□□□□ 0.66
SQLE-205ENST00000521232 ST3GAL5Q9UNP4 418 aa19.19■□□□□ 0.66
SQLE-205ENST00000521232 NLRC5Q86WI3 1866 aa19.18■□□□□ 0.66
SQLE-205ENST00000521232 MUC3AQ02505 3323 aa19.18■□□□□ 0.66
SQLE-205ENST00000521232 H3BNC9 293 aa19.18■□□□□ 0.66
SQLE-205ENST00000521232 EML1O00423 815 aa19.18■□□□□ 0.66
SQLE-205ENST00000521232 GPR182O15218 404 aa19.18■□□□□ 0.66
SQLE-205ENST00000521232 MMP1P03956 469 aa19.18■□□□□ 0.66
SQLE-205ENST00000521232 CLCN3P51790 818 aa19.18■□□□□ 0.66
SQLE-205ENST00000521232 MRPS5P82675 430 aaKnown RBP19.18■□□□□ 0.66
SQLE-205ENST00000521232 NPAS4Q8IUM7 802 aa19.18■□□□□ 0.66
SQLE-205ENST00000521232 LRRC71Q8N4P6 559 aa19.18■□□□□ 0.66
SQLE-205ENST00000521232 FIBCD1Q8N539 461 aa19.18■□□□□ 0.66
SQLE-205ENST00000521232 ASB2Q96Q27 587 aa19.18■□□□□ 0.66
SQLE-205ENST00000521232 CEP89Q96ST8 783 aa19.18■□□□□ 0.66
SQLE-205ENST00000521232 OSMRQ99650 979 aa19.18■□□□□ 0.66
SQLE-205ENST00000521232 RALGAPA2Q2PPJ7 1873 aa19.18■□□□□ 0.66
SQLE-205ENST00000521232 NCOR1O75376 2440 aa19.17■□□□□ 0.66
SQLE-205ENST00000521232 BRWD1Q9NSI6 2320 aa19.17■□□□□ 0.66
SQLE-205ENST00000521232 FAM205CA6NFA0 338 aa19.17■□□□□ 0.66
SQLE-205ENST00000521232 BTBD18B2RXH4 712 aa19.17■□□□□ 0.66
SQLE-205ENST00000521232 LINC00271P0C7V0 271 aa19.17■□□□□ 0.66
SQLE-205ENST00000521232 STAG3L1P0CL83 205 aa19.17■□□□□ 0.66
SQLE-205ENST00000521232 NLRP11P59045 1033 aaKnown RBP19.17■□□□□ 0.66
SQLE-205ENST00000521232 PSMC5P62195 406 aa19.17■□□□□ 0.66
SQLE-205ENST00000521232 CLP1Q92989 425 aaKnown RBP19.17■□□□□ 0.66
SQLE-205ENST00000521232 MAP7D2Q96T17 732 aa19.17■□□□□ 0.66
SQLE-205ENST00000521232 ADAMTS10Q9H324 1103 aa19.17■□□□□ 0.66
SQLE-205ENST00000521232 RGS18Q9NS28 235 aa19.17■□□□□ 0.66
SQLE-205ENST00000521232 AKT3Q9Y243 479 aa19.17■□□□□ 0.66
SQLE-205ENST00000521232 ADGRA3Q8IWK6 1321 aa19.17■□□□□ 0.66
SQLE-205ENST00000521232 IGKV6-21A0A0C4DH24 114 aa19.16■□□□□ 0.66
SQLE-205ENST00000521232 C5orf67F2Z3F1 127 aa19.16■□□□□ 0.66
SQLE-205ENST00000521232 MGEA5O60502 916 aa19.16■□□□□ 0.66
SQLE-205ENST00000521232 RB1P06400 928 aa19.16■□□□□ 0.66
SQLE-205ENST00000521232 TBC1D8BQ0IIM8 1120 aa19.16■□□□□ 0.66
SQLE-205ENST00000521232 TRIM29Q14134 588 aa19.16■□□□□ 0.66
SQLE-205ENST00000521232 SKIV2LQ15477 1246 aaKnown RBP19.16■□□□□ 0.66
SQLE-205ENST00000521232 FAM228AQ86W67 206 aa19.16■□□□□ 0.66
SQLE-205ENST00000521232 POTEDQ86YR6 584 aa19.16■□□□□ 0.66
SQLE-205ENST00000521232 DIS3L2Q8IYB7 885 aaKnown RBP19.16■□□□□ 0.66
SQLE-205ENST00000521232 SLFN12Q8IYM2 578 aa19.16■□□□□ 0.66
SQLE-205ENST00000521232 BANK1Q8NDB2 785 aa19.16■□□□□ 0.66
SQLE-205ENST00000521232 ZSCAN31Q96LW9 406 aaPredicted RBP19.16■□□□□ 0.66
SQLE-205ENST00000521232 PPP1R16BQ96T49 567 aa19.16■□□□□ 0.66
SQLE-205ENST00000521232 LLPHQ9BRT6 129 aaKnown RBP19.16■□□□□ 0.66
SQLE-205ENST00000521232 SEPT9Q9UHD8 586 aaPredicted RBP19.16■□□□□ 0.66
SQLE-205ENST00000521232 COG5Q9UP83 839 aa19.16■□□□□ 0.66
SQLE-205ENST00000521232 RWDD3Q9Y3V2 267 aa19.16■□□□□ 0.66
SQLE-205ENST00000521232 DDX11L8A8MPP1 907 aa19.15■□□□□ 0.66
SQLE-205ENST00000521232 MARCH6O60337 910 aa19.15■□□□□ 0.66
SQLE-205ENST00000521232 DKC1O60832 514 aaKnown RBP eCLIP19.15■□□□□ 0.66
SQLE-205ENST00000521232 BAG4O95429 457 aaKnown RBP19.15■□□□□ 0.66
SQLE-205ENST00000521232 P4HBP07237 508 aaKnown RBP19.15■□□□□ 0.66
SQLE-205ENST00000521232 BMPR1AP36894 532 aa19.15■□□□□ 0.66
SQLE-205ENST00000521232 QARSP47897 775 aaKnown RBP19.15■□□□□ 0.66
SQLE-205ENST00000521232 SARSP49591 514 aaKnown RBP19.15■□□□□ 0.66
SQLE-205ENST00000521232 RBM25P49756 843 aaKnown RBP19.15■□□□□ 0.66
SQLE-205ENST00000521232 GPC3P51654 580 aa19.15■□□□□ 0.66
SQLE-205ENST00000521232 GPM6BQ13491 265 aa19.15■□□□□ 0.66
SQLE-205ENST00000521232 BTG3Q14201 252 aaPredicted RBP19.15■□□□□ 0.66
SQLE-205ENST00000521232 EPHA7Q15375 998 aa19.15■□□□□ 0.66
SQLE-205ENST00000521232 MTERF2Q49AM1 385 aa19.15■□□□□ 0.66
SQLE-205ENST00000521232 ANO5Q75V66 913 aa19.15■□□□□ 0.66
SQLE-205ENST00000521232 CCDC83Q8IWF9 413 aa19.15■□□□□ 0.66
SQLE-205ENST00000521232 MRPL38Q96DV4 380 aaKnown RBP19.15■□□□□ 0.66
SQLE-205ENST00000521232 ADAM2Q99965 735 aa19.15■□□□□ 0.66
SQLE-205ENST00000521232 C1orf112Q9NSG2 853 aa19.15■□□□□ 0.66
SQLE-205ENST00000521232 RNF216Q9NWF9 866 aaPredicted RBP19.15■□□□□ 0.66
SQLE-205ENST00000521232 MYO7AQ13402 2215 aa19.15■□□□□ 0.66
SQLE-205ENST00000521232 TMEM150BA6NC51 233 aa19.14■□□□□ 0.65
SQLE-205ENST00000521232 MAFO75444 373 aaPredicted RBP19.14■□□□□ 0.65
SQLE-205ENST00000521232 EIF4BP23588 611 aaKnown RBP19.14■□□□□ 0.65
SQLE-205ENST00000521232 FAM189BP81408 668 aa19.14■□□□□ 0.65
SQLE-205ENST00000521232 CDC42EP1Q00587 391 aa19.14■□□□□ 0.65
SQLE-205ENST00000521232 SPIRE1Q08AE8 756 aa19.14■□□□□ 0.65
SQLE-205ENST00000521232 SLC24A5Q71RS6 500 aa19.14■□□□□ 0.65
SQLE-205ENST00000521232 CMTR2Q8IYT2 770 aaKnown RBP19.14■□□□□ 0.65
SQLE-205ENST00000521232 PCDHB7Q9Y5E2 793 aa19.14■□□□□ 0.65
SQLE-205ENST00000521232 DENND3A2RUS2 1198 aa19.13■□□□□ 0.65
SQLE-205ENST00000521232 C9IYK1 514 aa19.13■□□□□ 0.65
SQLE-205ENST00000521232 DRP2Q13474 957 aa19.13■□□□□ 0.65
SQLE-205ENST00000521232 DSC3Q14574 896 aa19.13■□□□□ 0.65
SQLE-205ENST00000521232 PTPROQ16827 1216 aa19.13■□□□□ 0.65
SQLE-205ENST00000521232 HLA-CQ95604 372 aa19.13■□□□□ 0.65
SQLE-205ENST00000521232 SH2D3AQ9BRG2 576 aa19.13■□□□□ 0.65
SQLE-205ENST00000521232 SH2B1Q9NRF2 756 aaPredicted RBP19.13■□□□□ 0.65
SQLE-205ENST00000521232 LRFN2Q9ULH4 789 aa19.13■□□□□ 0.65
SQLE-205ENST00000521232 DARSP14868 501 aaKnown RBP19.12■□□□□ 0.65
SQLE-205ENST00000521232 CTNNB1P35222 781 aa19.12■□□□□ 0.65
SQLE-205ENST00000521232 DNM2P50570 870 aa19.12■□□□□ 0.65
SQLE-205ENST00000521232 FOSBP53539 338 aa19.12■□□□□ 0.65
SQLE-205ENST00000521232 TFF2Q03403 129 aa19.12■□□□□ 0.65
SQLE-205ENST00000521232 AAK1Q2M2I8 961 aa19.12■□□□□ 0.65
SQLE-205ENST00000521232 C4orf19Q8IY42 314 aa19.12■□□□□ 0.65
SQLE-205ENST00000521232 JPH2Q9BR39 696 aaPredicted RBP19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms