RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 ZNF484Q5JVG2 852 aa9.92□□□□□ -0.82
CSMD1-208ENST00000520561 FAM102BQ5T8I3 360 aa9.92□□□□□ -0.82
CSMD1-208ENST00000520561 MAEAQ7L5Y9 396 aa9.92□□□□□ -0.82
CSMD1-208ENST00000520561 SFR1Q86XK3 245 aa9.92□□□□□ -0.82
CSMD1-208ENST00000520561 SH3TC2Q8TF17 1288 aa9.92□□□□□ -0.82
CSMD1-208ENST00000520561 KIFAP3Q92845 792 aa9.92□□□□□ -0.82
CSMD1-208ENST00000520561 SH2D3AQ9BRG2 576 aa9.92□□□□□ -0.82
CSMD1-208ENST00000520561 C16orf70Q9BSU1 422 aa9.92□□□□□ -0.82
CSMD1-208ENST00000520561 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.92□□□□□ -0.82
CSMD1-208ENST00000520561 TUT1Q9H6E5 874 aaKnown RBP9.92□□□□□ -0.82
CSMD1-208ENST00000520561 GDAQ9Y2T3 454 aa9.92□□□□□ -0.82
CSMD1-208ENST00000520561 MYADML2A6NDP7 307 aa9.91□□□□□ -0.82
CSMD1-208ENST00000520561 RSPH10B2B2RC85 870 aa9.91□□□□□ -0.82
CSMD1-208ENST00000520561 PSMA7O14818 248 aa9.91□□□□□ -0.82
CSMD1-208ENST00000520561 ADAMTS4O75173 837 aa9.91□□□□□ -0.82
CSMD1-208ENST00000520561 KIF20AO95235 890 aa9.91□□□□□ -0.82
CSMD1-208ENST00000520561 MYCNP04198 464 aaPredicted RBP9.91□□□□□ -0.82
CSMD1-208ENST00000520561 RSPH10BP0C881 870 aa9.91□□□□□ -0.82
CSMD1-208ENST00000520561 CST5P28325 142 aaPredicted RBP9.91□□□□□ -0.82
CSMD1-208ENST00000520561 PSEN2P49810 448 aa9.91□□□□□ -0.82
CSMD1-208ENST00000520561 ZNF165P49910 485 aa9.91□□□□□ -0.82
CSMD1-208ENST00000520561 ZNF131P52739 623 aa9.91□□□□□ -0.82
CSMD1-208ENST00000520561 CHMP4BP1P59074 171 aa9.91□□□□□ -0.82
CSMD1-208ENST00000520561 NKX3-2P78367 333 aa9.91□□□□□ -0.82
CSMD1-208ENST00000520561 EHHADHQ08426 723 aa9.91□□□□□ -0.82
CSMD1-208ENST00000520561 PPFIA1Q13136 1202 aa9.91□□□□□ -0.82
CSMD1-208ENST00000520561 GSE1Q14687 1217 aa9.91□□□□□ -0.82
CSMD1-208ENST00000520561 TARBP2Q15633 366 aaKnown RBP9.91□□□□□ -0.82
CSMD1-208ENST00000520561 CT47A1Q5JQC4 288 aaPredicted RBP9.91□□□□□ -0.82
CSMD1-208ENST00000520561 GNASQ5JWF2 1037 aa9.91□□□□□ -0.82
CSMD1-208ENST00000520561 L1TD1Q5T7N2 865 aaKnown RBP9.91□□□□□ -0.82
CSMD1-208ENST00000520561 C11orf57Q6ZUT1 292 aaPredicted RBP9.91□□□□□ -0.82
CSMD1-208ENST00000520561 STXBP4Q6ZWJ1 553 aa9.91□□□□□ -0.82
CSMD1-208ENST00000520561 RNF180Q86T96 592 aa9.91□□□□□ -0.82
CSMD1-208ENST00000520561 MYCT1Q8N699 235 aa9.91□□□□□ -0.82
CSMD1-208ENST00000520561 PCSK9Q8NBP7 692 aaKnown RBP9.91□□□□□ -0.82
CSMD1-208ENST00000520561 SLC17A8Q8NDX2 589 aa9.91□□□□□ -0.82
CSMD1-208ENST00000520561 FAM200AQ8TCP9 573 aa9.91□□□□□ -0.82
CSMD1-208ENST00000520561 TCP11Q8WWU5 503 aa9.91□□□□□ -0.82
CSMD1-208ENST00000520561 MTG1Q9BT17 334 aaPredicted RBP9.91□□□□□ -0.82
CSMD1-208ENST00000520561 POLR3FQ9H1D9 316 aaPredicted RBP9.91□□□□□ -0.82
CSMD1-208ENST00000520561 DHX33Q9H6R0 707 aaKnown RBP9.91□□□□□ -0.82
CSMD1-208ENST00000520561 C17orf75Q9HAS0 396 aa9.91□□□□□ -0.82
CSMD1-208ENST00000520561 OLFML3Q9NRN5 406 aa9.91□□□□□ -0.82
CSMD1-208ENST00000520561 LARSQ9P2J5 1176 aaKnown RBP9.91□□□□□ -0.82
CSMD1-208ENST00000520561 FRMPD3Q5JV73 1810 aa9.91□□□□□ -0.82
CSMD1-208ENST00000520561 UBE4BO95155 1302 aa9.9□□□□□ -0.82
CSMD1-208ENST00000520561 GOLGA6L3A6NEY3 463 aa9.9□□□□□ -0.82
CSMD1-208ENST00000520561 RRN3P2A6NIE6 340 aa9.9□□□□□ -0.82
CSMD1-208ENST00000520561 BECN2A8MW95 431 aa9.9□□□□□ -0.82
CSMD1-208ENST00000520561 K7ENM7 598 aa9.9□□□□□ -0.82
CSMD1-208ENST00000520561 MAGEB2O15479 319 aa9.9□□□□□ -0.82
CSMD1-208ENST00000520561 PLS3P13797 630 aa9.9□□□□□ -0.82
CSMD1-208ENST00000520561 INSRRP14616 1297 aa9.9□□□□□ -0.82
CSMD1-208ENST00000520561 BMP6P22004 513 aa9.9□□□□□ -0.82
CSMD1-208ENST00000520561 LBX1P52954 281 aa9.9□□□□□ -0.82
CSMD1-208ENST00000520561 IGBP1P78318 339 aa9.9□□□□□ -0.82
CSMD1-208ENST00000520561 PURAQ00577 322 aaKnown RBP9.9□□□□□ -0.82
CSMD1-208ENST00000520561 PAK1Q13153 545 aa9.9□□□□□ -0.82
CSMD1-208ENST00000520561 MAPK7Q13164 816 aa9.9□□□□□ -0.82
CSMD1-208ENST00000520561 DMP1Q13316 513 aaPredicted RBP9.9□□□□□ -0.82
CSMD1-208ENST00000520561 ALCAMQ13740 583 aa9.9□□□□□ -0.82
CSMD1-208ENST00000520561 PPP2R5AQ15172 486 aa9.9□□□□□ -0.82
CSMD1-208ENST00000520561 GRIK4Q16099 956 aa9.9□□□□□ -0.82
CSMD1-208ENST00000520561 KIAA0753Q2KHM9 967 aa9.9□□□□□ -0.82
CSMD1-208ENST00000520561 COBLL1Q53SF7 1204 aa9.9□□□□□ -0.82
CSMD1-208ENST00000520561 ODR4Q5SWX8 454 aa9.9□□□□□ -0.82
CSMD1-208ENST00000520561 KLHL10Q6JEL2 608 aa9.9□□□□□ -0.82
CSMD1-208ENST00000520561 FBXO46Q6PJ61 603 aaPredicted RBP9.9□□□□□ -0.82
CSMD1-208ENST00000520561 FAM178BQ8IXR5 827 aa9.9□□□□□ -0.82
CSMD1-208ENST00000520561 SMYD4Q8IYR2 804 aaPredicted RBP9.9□□□□□ -0.82
CSMD1-208ENST00000520561 RETREG2Q8NC44 543 aa9.9□□□□□ -0.82
CSMD1-208ENST00000520561 KIAA0895Q8NCT3 520 aa9.9□□□□□ -0.82
CSMD1-208ENST00000520561 IFT74Q96LB3 600 aa9.9□□□□□ -0.82
CSMD1-208ENST00000520561 BPIFA3Q9BQP9 254 aa9.9□□□□□ -0.82
CSMD1-208ENST00000520561 RNPEPQ9H4A4 650 aa9.9□□□□□ -0.82
CSMD1-208ENST00000520561 MRPL44Q9H9J2 332 aaKnown RBP9.9□□□□□ -0.82
CSMD1-208ENST00000520561 SLC39A2Q9NP94 309 aa9.9□□□□□ -0.82
CSMD1-208ENST00000520561 XPNPEP1Q9NQW7 623 aa9.9□□□□□ -0.82
CSMD1-208ENST00000520561 TBC1D7Q9P0N9 293 aa9.9□□□□□ -0.82
CSMD1-208ENST00000520561 CTNND2Q9UQB3 1225 aa9.9□□□□□ -0.82
CSMD1-208ENST00000520561 NRCAMQ92823 1304 aa9.89□□□□□ -0.83
CSMD1-208ENST00000520561 MOXD2PA6NHM9 499 aa9.89□□□□□ -0.83
CSMD1-208ENST00000520561 SMTNL1A8MU46 457 aa9.89□□□□□ -0.83
CSMD1-208ENST00000520561 H0YCG3 227 aa9.89□□□□□ -0.83
CSMD1-208ENST00000520561 GOLGA6L19H0YKK7 550 aa9.89□□□□□ -0.83
CSMD1-208ENST00000520561 HAS3O00219 553 aa9.89□□□□□ -0.83
CSMD1-208ENST00000520561 EIF3DO15371 548 aaKnown RBP eCLIP9.89□□□□□ -0.83
CSMD1-208ENST00000520561 MAFO75444 373 aaPredicted RBP9.89□□□□□ -0.83
CSMD1-208ENST00000520561 CABYRO75952 493 aa9.89□□□□□ -0.83
CSMD1-208ENST00000520561 GCNT3O95395 438 aa9.89□□□□□ -0.83
CSMD1-208ENST00000520561 C22orf31O95567 290 aa9.89□□□□□ -0.83
CSMD1-208ENST00000520561 SMIM10L2AP0DMW4 78 aa9.89□□□□□ -0.83
CSMD1-208ENST00000520561 SMIM10L2BP0DMW5 78 aa9.89□□□□□ -0.83
CSMD1-208ENST00000520561 MAPTP10636 758 aaKnown RBP9.89□□□□□ -0.83
CSMD1-208ENST00000520561 GNAT1P11488 350 aa9.89□□□□□ -0.83
CSMD1-208ENST00000520561 ERCC5P28715 1186 aaPredicted RBP9.89□□□□□ -0.83
CSMD1-208ENST00000520561 DNM2P50570 870 aa9.89□□□□□ -0.83
CSMD1-208ENST00000520561 SMTNP53814 917 aa9.89□□□□□ -0.83
CSMD1-208ENST00000520561 RTP1P59025 263 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms