RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 Q4G0T1 1027 aa18.03■□□□□ 0.48
PCDHGA11-202ENST00000518882 YTHDF3Q7Z739 585 aaKnown RBP18.03■□□□□ 0.48
PCDHGA11-202ENST00000518882 SLC30A5Q8TAD4 765 aa18.03■□□□□ 0.48
PCDHGA11-202ENST00000518882 METTL14Q9HCE5 456 aaKnown RBP18.03■□□□□ 0.48
PCDHGA11-202ENST00000518882 BCCIPQ9P287 314 aaKnown RBP eCLIP18.03■□□□□ 0.48
PCDHGA11-202ENST00000518882 VAV3Q9UKW4 847 aa18.03■□□□□ 0.48
PCDHGA11-202ENST00000518882 ATP8B3O60423 1300 aa18.03■□□□□ 0.48
PCDHGA11-202ENST00000518882 IGSF9BQ9UPX0 1349 aa18.03■□□□□ 0.48
PCDHGA11-202ENST00000518882 UBR3Q6ZT12 1888 aa18.03■□□□□ 0.48
PCDHGA11-202ENST00000518882 MSH4O15457 936 aa18.03■□□□□ 0.48
PCDHGA11-202ENST00000518882 ANXA13P27216 316 aa18.03■□□□□ 0.48
PCDHGA11-202ENST00000518882 POU5F1Q01860 360 aaKnown RBP18.03■□□□□ 0.48
PCDHGA11-202ENST00000518882 USH1GQ495M9 461 aa18.03■□□□□ 0.48
PCDHGA11-202ENST00000518882 DCAF12L1Q5VU92 463 aa18.03■□□□□ 0.48
PCDHGA11-202ENST00000518882 SLFN13Q68D06 897 aa18.03■□□□□ 0.48
PCDHGA11-202ENST00000518882 APOBEC3HQ6NTF7 200 aaKnown RBP18.03■□□□□ 0.48
PCDHGA11-202ENST00000518882 SLC30A10Q6XR72 485 aa18.03■□□□□ 0.48
PCDHGA11-202ENST00000518882 VPS36Q86VN1 386 aa18.03■□□□□ 0.48
PCDHGA11-202ENST00000518882 GLYCTKQ8IVS8 523 aa18.03■□□□□ 0.48
PCDHGA11-202ENST00000518882 SEC14L1Q92503 715 aa18.03■□□□□ 0.48
PCDHGA11-202ENST00000518882 CYFIP2Q96F07 1278 aa18.03■□□□□ 0.48
PCDHGA11-202ENST00000518882 DPH5Q9H2P9 285 aa18.03■□□□□ 0.48
PCDHGA11-202ENST00000518882 SLITRK6Q9H5Y7 841 aa18.03■□□□□ 0.48
PCDHGA11-202ENST00000518882 RGL1Q9NZL6 768 aa18.03■□□□□ 0.48
PCDHGA11-202ENST00000518882 EML1O00423 815 aa18.02■□□□□ 0.48
PCDHGA11-202ENST00000518882 TBX3O15119 743 aa18.02■□□□□ 0.48
PCDHGA11-202ENST00000518882 BUB1BO60566 1050 aaPredicted RBP18.02■□□□□ 0.48
PCDHGA11-202ENST00000518882 HLA-DOAP06340 250 aa18.02■□□□□ 0.48
PCDHGA11-202ENST00000518882 IFT88Q13099 833 aa18.02■□□□□ 0.48
PCDHGA11-202ENST00000518882 C6orf89Q6UWU4 347 aa18.02■□□□□ 0.48
PCDHGA11-202ENST00000518882 SIAH1Q8IUQ4 282 aa18.02■□□□□ 0.48
PCDHGA11-202ENST00000518882 ARFGAP2Q8N6H7 521 aa18.02■□□□□ 0.48
PCDHGA11-202ENST00000518882 LMBR1Q8WVP7 490 aa18.02■□□□□ 0.48
PCDHGA11-202ENST00000518882 TRIM51Q9BSJ1 452 aa18.02■□□□□ 0.48
PCDHGA11-202ENST00000518882 INTUQ9ULD6 942 aa18.02■□□□□ 0.48
PCDHGA11-202ENST00000518882 PPP1R9AQ9ULJ8 1098 aa18.02■□□□□ 0.48
PCDHGA11-202ENST00000518882 GOLGB1Q14789 3259 aaKnown RBP18.02■□□□□ 0.48
PCDHGA11-202ENST00000518882 SRRM3A6NNA2 597 aaPredicted RBP18.02■□□□□ 0.47
PCDHGA11-202ENST00000518882 FGGP02679 453 aa18.02■□□□□ 0.47
PCDHGA11-202ENST00000518882 RPL13P26373 211 aaKnown RBP18.02■□□□□ 0.47
PCDHGA11-202ENST00000518882 HOXA10P31260 410 aaPredicted RBP18.02■□□□□ 0.47
PCDHGA11-202ENST00000518882 CACNB3P54284 484 aa18.02■□□□□ 0.47
PCDHGA11-202ENST00000518882 QPCTQ16769 361 aa18.02■□□□□ 0.47
PCDHGA11-202ENST00000518882 RNF187Q5TA31 235 aaPredicted RBP18.02■□□□□ 0.47
PCDHGA11-202ENST00000518882 MCTP2Q6DN12 878 aa18.02■□□□□ 0.47
PCDHGA11-202ENST00000518882 MICALCLQ6ZW33 695 aa18.02■□□□□ 0.47
PCDHGA11-202ENST00000518882 COA1Q9GZY4 146 aa18.02■□□□□ 0.47
PCDHGA11-202ENST00000518882 NOVA2Q9UNW9 492 aaKnown RBP18.02■□□□□ 0.47
PCDHGA11-202ENST00000518882 F8VZ95 297 aa18.01■□□□□ 0.47
PCDHGA11-202ENST00000518882 TBCAO75347 108 aaKnown RBP18.01■□□□□ 0.47
PCDHGA11-202ENST00000518882 FERP16591 822 aa18.01■□□□□ 0.47
PCDHGA11-202ENST00000518882 NMT1P30419 496 aaKnown RBP18.01■□□□□ 0.47
PCDHGA11-202ENST00000518882 NPEPPSP55786 919 aa18.01■□□□□ 0.47
PCDHGA11-202ENST00000518882 BIRC3Q13489 604 aa18.01■□□□□ 0.47
PCDHGA11-202ENST00000518882 COG2Q14746 738 aa18.01■□□□□ 0.47
PCDHGA11-202ENST00000518882 ZC2HC1CQ53FD0 456 aaPredicted RBP18.01■□□□□ 0.47
PCDHGA11-202ENST00000518882 KSR1Q8IVT5 923 aa18.01■□□□□ 0.47
PCDHGA11-202ENST00000518882 SYCE1Q8N0S2 351 aa18.01■□□□□ 0.47
PCDHGA11-202ENST00000518882 SLC35G2Q8TBE7 412 aa18.01■□□□□ 0.47
PCDHGA11-202ENST00000518882 PIGOQ8TEQ8 1089 aa18.01■□□□□ 0.47
PCDHGA11-202ENST00000518882 NGLY1Q96IV0 654 aa18.01■□□□□ 0.47
PCDHGA11-202ENST00000518882 EIF2AK1Q9BQI3 630 aaKnown RBP18.01■□□□□ 0.47
PCDHGA11-202ENST00000518882 TRIM31Q9BZY9 425 aa18.01■□□□□ 0.47
PCDHGA11-202ENST00000518882 SUGT1Q9Y2Z0 365 aa18.01■□□□□ 0.47
PCDHGA11-202ENST00000518882 RABGAP1Q9Y3P9 1069 aa18.01■□□□□ 0.47
PCDHGA11-202ENST00000518882 PCDHAC2Q9Y5I4 1007 aa18.01■□□□□ 0.47
PCDHGA11-202ENST00000518882 GTPBP10A4D1E9 387 aaKnown RBP18.01■□□□□ 0.47
PCDHGA11-202ENST00000518882 BACH1O14867 736 aa18.01■□□□□ 0.47
PCDHGA11-202ENST00000518882 DDX3YO15523 660 aaKnown RBP18.01■□□□□ 0.47
PCDHGA11-202ENST00000518882 TRAPPC3O43617 180 aa18.01■□□□□ 0.47
PCDHGA11-202ENST00000518882 HOXA13P31271 388 aaPredicted RBP18.01■□□□□ 0.47
PCDHGA11-202ENST00000518882 COPB2P35606 906 aa18.01■□□□□ 0.47
PCDHGA11-202ENST00000518882 SREBF1P36956 1147 aa18.01■□□□□ 0.47
PCDHGA11-202ENST00000518882 STAT1P42224 750 aa18.01■□□□□ 0.47
PCDHGA11-202ENST00000518882 DHX9Q08211 1270 aaKnown RBP18.01■□□□□ 0.47
PCDHGA11-202ENST00000518882 DOK7Q18PE1 504 aa18.01■□□□□ 0.47
PCDHGA11-202ENST00000518882 RINT1Q6NUQ1 792 aa18.01■□□□□ 0.47
PCDHGA11-202ENST00000518882 RUFY4Q6ZNE9 571 aa18.01■□□□□ 0.47
PCDHGA11-202ENST00000518882 CCDC26Q8TAB7 109 aa18.01■□□□□ 0.47
PCDHGA11-202ENST00000518882 ATP8B4Q8TF62 1192 aa18.01■□□□□ 0.47
PCDHGA11-202ENST00000518882 DCAF4Q8WV16 495 aa18.01■□□□□ 0.47
PCDHGA11-202ENST00000518882 MKL1Q969V6 931 aa18.01■□□□□ 0.47
PCDHGA11-202ENST00000518882 GPR88Q9GZN0 384 aa18.01■□□□□ 0.47
PCDHGA11-202ENST00000518882 AMFRQ9UKV5 643 aa18.01■□□□□ 0.47
PCDHGA11-202ENST00000518882 GMNCA6NCL1 334 aa18■□□□□ 0.47
PCDHGA11-202ENST00000518882 H0YHG0 523 aa18■□□□□ 0.47
PCDHGA11-202ENST00000518882 OPLAHO14841 1288 aa18■□□□□ 0.47
PCDHGA11-202ENST00000518882 ABCB4P21439 1286 aa18■□□□□ 0.47
PCDHGA11-202ENST00000518882 SOX5P35711 763 aa18■□□□□ 0.47
PCDHGA11-202ENST00000518882 PPP2R2AP63151 447 aa18■□□□□ 0.47
PCDHGA11-202ENST00000518882 TCP10Q12799 353 aa18■□□□□ 0.47
PCDHGA11-202ENST00000518882 MTMR3Q13615 1198 aa18■□□□□ 0.47
PCDHGA11-202ENST00000518882 FAM186BQ8IYM0 893 aa18■□□□□ 0.47
PCDHGA11-202ENST00000518882 CCDC17Q96LX7 622 aa18■□□□□ 0.47
PCDHGA11-202ENST00000518882 SYT11Q9BT88 431 aa18■□□□□ 0.47
PCDHGA11-202ENST00000518882 AMNQ9BXJ7 453 aa18■□□□□ 0.47
PCDHGA11-202ENST00000518882 OLFML3Q9NRN5 406 aa18■□□□□ 0.47
PCDHGA11-202ENST00000518882 DDX20Q9UHI6 824 aaKnown RBP18■□□□□ 0.47
PCDHGA11-202ENST00000518882 NCANO14594 1321 aa18■□□□□ 0.47
PCDHGA11-202ENST00000518882 MYH11P35749 1972 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms