RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 SCP2P22307 547 aa16.61■□□□□ 0.25
TRAPPC9-205ENST00000518839 PTGS1P23219 599 aa16.61■□□□□ 0.25
TRAPPC9-205ENST00000518839 RPL13P26373 211 aaKnown RBP16.61■□□□□ 0.25
TRAPPC9-205ENST00000518839 TCF7P36402 384 aaPredicted RBP16.61■□□□□ 0.25
TRAPPC9-205ENST00000518839 RFC5P40937 340 aa16.61■□□□□ 0.25
TRAPPC9-205ENST00000518839 MTIF2P46199 727 aaKnown RBP16.61■□□□□ 0.25
TRAPPC9-205ENST00000518839 NPEPPSP55786 919 aa16.61■□□□□ 0.25
TRAPPC9-205ENST00000518839 NFIL3Q16649 462 aa16.61■□□□□ 0.25
TRAPPC9-205ENST00000518839 PLA2G4FQ68DD2 849 aa16.61■□□□□ 0.25
TRAPPC9-205ENST00000518839 SPECC1LQ69YQ0 1117 aa16.61■□□□□ 0.25
TRAPPC9-205ENST00000518839 PLPPR4Q7Z2D5 763 aa16.61■□□□□ 0.25
TRAPPC9-205ENST00000518839 CREBRFQ8IUR6 639 aa16.61■□□□□ 0.25
TRAPPC9-205ENST00000518839 ZC3H3Q8IXZ2 948 aaKnown RBP16.61■□□□□ 0.25
TRAPPC9-205ENST00000518839 DAW1Q8N136 415 aa16.61■□□□□ 0.25
TRAPPC9-205ENST00000518839 SOCS4Q8WXH5 440 aa16.61■□□□□ 0.25
TRAPPC9-205ENST00000518839 HVCN1Q96D96 273 aa16.61■□□□□ 0.25
TRAPPC9-205ENST00000518839 GPR20Q99678 358 aa16.61■□□□□ 0.25
TRAPPC9-205ENST00000518839 TINF2Q9BSI4 451 aa16.61■□□□□ 0.25
TRAPPC9-205ENST00000518839 FGFBP2Q9BYJ0 223 aa16.61■□□□□ 0.25
TRAPPC9-205ENST00000518839 ATP6V0A4Q9HBG4 840 aa16.61■□□□□ 0.25
TRAPPC9-205ENST00000518839 INTS13Q9NVM9 706 aa16.61■□□□□ 0.25
TRAPPC9-205ENST00000518839 TAB2Q9NYJ8 693 aa16.61■□□□□ 0.25
TRAPPC9-205ENST00000518839 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.61■□□□□ 0.25
TRAPPC9-205ENST00000518839 ITIH6Q6UXX5 1313 aa16.61■□□□□ 0.25
TRAPPC9-205ENST00000518839 SFI1A8K8P3 1242 aa16.6■□□□□ 0.25
TRAPPC9-205ENST00000518839 LGALS16A8MUM7 142 aa16.6■□□□□ 0.25
TRAPPC9-205ENST00000518839 H0YCG3 227 aa16.6■□□□□ 0.25
TRAPPC9-205ENST00000518839 CA12O43570 354 aa16.6■□□□□ 0.25
TRAPPC9-205ENST00000518839 SORBS3O60504 671 aa16.6■□□□□ 0.25
TRAPPC9-205ENST00000518839 PRPF6O94906 941 aaKnown RBP16.6■□□□□ 0.25
TRAPPC9-205ENST00000518839 HOXC6P09630 235 aa16.6■□□□□ 0.25
TRAPPC9-205ENST00000518839 DNM2P50570 870 aa16.6■□□□□ 0.25
TRAPPC9-205ENST00000518839 CASP5P51878 434 aa16.6■□□□□ 0.25
TRAPPC9-205ENST00000518839 SMTNP53814 917 aa16.6■□□□□ 0.25
TRAPPC9-205ENST00000518839 NOGQ13253 232 aa16.6■□□□□ 0.25
TRAPPC9-205ENST00000518839 CCDC144BQ3MJ40 725 aa16.6■□□□□ 0.25
TRAPPC9-205ENST00000518839 TAPT1Q6NXT6 567 aa16.6■□□□□ 0.25
TRAPPC9-205ENST00000518839 LRRC55Q6ZSA7 311 aa16.6■□□□□ 0.25
TRAPPC9-205ENST00000518839 PAXIP1Q6ZW49 1069 aaPredicted RBP16.6■□□□□ 0.25
TRAPPC9-205ENST00000518839 EMID1Q96A84 441 aaPredicted RBP16.6■□□□□ 0.25
TRAPPC9-205ENST00000518839 SPATA33Q96N06 139 aa16.6■□□□□ 0.25
TRAPPC9-205ENST00000518839 FIZ1Q96SL8 496 aa16.6■□□□□ 0.25
TRAPPC9-205ENST00000518839 TUBGCP2Q9BSJ2 902 aa16.6■□□□□ 0.25
TRAPPC9-205ENST00000518839 VPS16Q9H269 839 aa16.6■□□□□ 0.25
TRAPPC9-205ENST00000518839 TMEM206Q9H813 350 aa16.6■□□□□ 0.25
TRAPPC9-205ENST00000518839 CGNQ9P2M7 1197 aaKnown RBP16.6■□□□□ 0.25
TRAPPC9-205ENST00000518839 NRBP1Q9UHY1 535 aa16.6■□□□□ 0.25
TRAPPC9-205ENST00000518839 DOCK3Q8IZD9 2030 aa16.59■□□□□ 0.25
TRAPPC9-205ENST00000518839 A0A1W2PQC6 194 aa16.59■□□□□ 0.25
TRAPPC9-205ENST00000518839 K7ENM7 598 aa16.59■□□□□ 0.25
TRAPPC9-205ENST00000518839 PPP1R37O75864 691 aa16.59■□□□□ 0.25
TRAPPC9-205ENST00000518839 TPM1P09493 284 aa16.59■□□□□ 0.25
TRAPPC9-205ENST00000518839 PRKCSHP14314 528 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC9-205ENST00000518839 NMT1P30419 496 aaKnown RBP16.59■□□□□ 0.25
TRAPPC9-205ENST00000518839 PBX1P40424 430 aa16.59■□□□□ 0.25
TRAPPC9-205ENST00000518839 RGS2P41220 211 aa16.59■□□□□ 0.25
TRAPPC9-205ENST00000518839 MARSP56192 900 aaKnown RBP16.59■□□□□ 0.25
TRAPPC9-205ENST00000518839 SNRPFP62306 86 aaKnown RBP16.59■□□□□ 0.25
TRAPPC9-205ENST00000518839 DMP1Q13316 513 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC9-205ENST00000518839 TRIM14Q14142 442 aa16.59■□□□□ 0.25
TRAPPC9-205ENST00000518839 MAN2A1Q16706 1144 aa16.59■□□□□ 0.25
TRAPPC9-205ENST00000518839 FAM102BQ5T8I3 360 aa16.59■□□□□ 0.25
TRAPPC9-205ENST00000518839 IQSEC1Q6DN90 963 aa16.59■□□□□ 0.25
TRAPPC9-205ENST00000518839 HS2ST1Q7LGA3 356 aa16.59■□□□□ 0.25
TRAPPC9-205ENST00000518839 SPIRE2Q8WWL2 714 aa16.59■□□□□ 0.25
TRAPPC9-205ENST00000518839 BBXQ8WY36 941 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC9-205ENST00000518839 PCYT2Q99447 389 aa16.59■□□□□ 0.25
TRAPPC9-205ENST00000518839 STRA6Q9BX79 667 aa16.59■□□□□ 0.25
TRAPPC9-205ENST00000518839 KATNBL1Q9H079 304 aa16.59■□□□□ 0.25
TRAPPC9-205ENST00000518839 SMARCAD1Q9H4L7 1026 aa16.59■□□□□ 0.25
TRAPPC9-205ENST00000518839 PDLIM7Q9NR12 457 aa16.59■□□□□ 0.25
TRAPPC9-205ENST00000518839 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.59■□□□□ 0.25
TRAPPC9-205ENST00000518839 SRCAPQ6ZRS2 3230 aa16.59■□□□□ 0.25
TRAPPC9-205ENST00000518839 TMEM150BA6NC51 233 aa16.58■□□□□ 0.24
TRAPPC9-205ENST00000518839 SNAI1O95863 264 aaPredicted RBP16.58■□□□□ 0.24
TRAPPC9-205ENST00000518839 ATP4AP20648 1035 aa16.58■□□□□ 0.24
TRAPPC9-205ENST00000518839 SFPQP23246 707 aaKnown RBP eCLIP16.58■□□□□ 0.24
TRAPPC9-205ENST00000518839 POLGP54098 1239 aaPredicted RBP16.58■□□□□ 0.24
TRAPPC9-205ENST00000518839 NCKAP1LP55160 1127 aa16.58■□□□□ 0.24
TRAPPC9-205ENST00000518839 PPP2R3AQ06190 1150 aa16.58■□□□□ 0.24
TRAPPC9-205ENST00000518839 CRHR2Q13324 411 aa16.58■□□□□ 0.24
TRAPPC9-205ENST00000518839 ADAM9Q13443 819 aa16.58■□□□□ 0.24
TRAPPC9-205ENST00000518839 MYBPC2Q14324 1141 aa16.58■□□□□ 0.24
TRAPPC9-205ENST00000518839 MTERF2Q49AM1 385 aa16.58■□□□□ 0.24
TRAPPC9-205ENST00000518839 CCDC40Q4G0X9 1142 aa16.58■□□□□ 0.24
TRAPPC9-205ENST00000518839 FKBP15Q5T1M5 1219 aa16.58■□□□□ 0.24
TRAPPC9-205ENST00000518839 MAEAQ7L5Y9 396 aa16.58■□□□□ 0.24
TRAPPC9-205ENST00000518839 LRRC8AQ8IWT6 810 aa16.58■□□□□ 0.24
TRAPPC9-205ENST00000518839 NPLOC4Q8TAT6 608 aa16.58■□□□□ 0.24
TRAPPC9-205ENST00000518839 SLC7A3Q8WY07 619 aa16.58■□□□□ 0.24
TRAPPC9-205ENST00000518839 GLG1Q92896 1179 aa16.58■□□□□ 0.24
TRAPPC9-205ENST00000518839 IFT74Q96LB3 600 aa16.58■□□□□ 0.24
TRAPPC9-205ENST00000518839 ACCSQ96QU6 501 aa16.58■□□□□ 0.24
TRAPPC9-205ENST00000518839 JPH2Q9BR39 696 aaPredicted RBP16.58■□□□□ 0.24
TRAPPC9-205ENST00000518839 NOC4LQ9BVI4 516 aaKnown RBP16.58■□□□□ 0.24
TRAPPC9-205ENST00000518839 GBP3Q9H0R5 595 aa16.58■□□□□ 0.24
TRAPPC9-205ENST00000518839 PDGFCQ9NRA1 345 aa16.58■□□□□ 0.24
TRAPPC9-205ENST00000518839 EXOC7Q9UPT5 735 aa16.58■□□□□ 0.24
TRAPPC9-205ENST00000518839 TELO2Q9Y4R8 837 aa16.58■□□□□ 0.24
TRAPPC9-205ENST00000518839 SLC16A3O15427 465 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms