RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 ARID2Q68CP9 1835 aa14.94□□□□□ -0.02
VEGFA-219ENST00000518824 SLITRK3O94933 977 aa14.94□□□□□ -0.02
VEGFA-219ENST00000518824 BAG4O95429 457 aaKnown RBP14.94□□□□□ -0.02
VEGFA-219ENST00000518824 P4HBP07237 508 aaKnown RBP14.94□□□□□ -0.02
VEGFA-219ENST00000518824 U2AF2P26368 475 aaKnown RBP eCLIP14.94□□□□□ -0.022e-48■□□□□ 11.2
VEGFA-219ENST00000518824 QARSP47897 775 aaKnown RBP14.94□□□□□ -0.02
VEGFA-219ENST00000518824 TTC38Q5R3I4 469 aa14.94□□□□□ -0.02
VEGFA-219ENST00000518824 SLFN12Q8IYM2 578 aa14.94□□□□□ -0.02
VEGFA-219ENST00000518824 NME8Q8N427 588 aa14.94□□□□□ -0.02
VEGFA-219ENST00000518824 C4orf32Q8N8J7 132 aa14.94□□□□□ -0.02
VEGFA-219ENST00000518824 TOP1MTQ969P6 601 aa14.94□□□□□ -0.02
VEGFA-219ENST00000518824 EIF2AK1Q9BQI3 630 aaKnown RBP14.94□□□□□ -0.02
VEGFA-219ENST00000518824 ZBED2Q9BTP6 218 aa14.94□□□□□ -0.02
VEGFA-219ENST00000518824 ADAMTS10Q9H324 1103 aa14.94□□□□□ -0.02
VEGFA-219ENST00000518824 ERVK-5Q9HDB9 667 aa14.94□□□□□ -0.02
VEGFA-219ENST00000518824 BMP2KQ9NSY1 1161 aaPredicted RBP14.94□□□□□ -0.02
VEGFA-219ENST00000518824 PCDHA12Q9UN75 941 aa14.94□□□□□ -0.02
VEGFA-219ENST00000518824 CEP131Q9UPN4 1083 aa14.94□□□□□ -0.02
VEGFA-219ENST00000518824 AKT3Q9Y243 479 aa14.94□□□□□ -0.02
VEGFA-219ENST00000518824 PCDHB6Q9Y5E3 794 aa14.94□□□□□ -0.02
VEGFA-219ENST00000518824 IGKV6-21A0A0C4DH24 114 aa14.93□□□□□ -0.02
VEGFA-219ENST00000518824 MAGEB2O15479 319 aa14.93□□□□□ -0.02
VEGFA-219ENST00000518824 EFCAB14O75071 495 aa14.93□□□□□ -0.02
VEGFA-219ENST00000518824 CSDE1O75534 798 aaKnown RBP14.93□□□□□ -0.02
VEGFA-219ENST00000518824 AMHP03971 560 aa14.93□□□□□ -0.02
VEGFA-219ENST00000518824 FGFR4P22455 802 aa14.93□□□□□ -0.02
VEGFA-219ENST00000518824 MCM2P49736 904 aa14.93□□□□□ -0.02
VEGFA-219ENST00000518824 NLRP11P59045 1033 aaKnown RBP14.93□□□□□ -0.02
VEGFA-219ENST00000518824 TBC1D8BQ0IIM8 1120 aa14.93□□□□□ -0.02
VEGFA-219ENST00000518824 FAM228AQ86W67 206 aa14.93□□□□□ -0.02
VEGFA-219ENST00000518824 APBB2Q92870 758 aa14.93□□□□□ -0.02
VEGFA-219ENST00000518824 TTC3P53804 2025 aa14.93□□□□□ -0.02
VEGFA-219ENST00000518824 COL4A4P53420 1690 aaPredicted RBP14.93□□□□□ -0.02
VEGFA-219ENST00000518824 LINC01553A4QN01 128 aa14.92□□□□□ -0.02
VEGFA-219ENST00000518824 M0QZ92 97 aa14.92□□□□□ -0.02
VEGFA-219ENST00000518824 FOSL2P15408 326 aa14.92□□□□□ -0.02
VEGFA-219ENST00000518824 HTRA4P83105 476 aaPredicted RBP14.92□□□□□ -0.02
VEGFA-219ENST00000518824 NFX1Q12986 1120 aaKnown RBP14.92□□□□□ -0.02
VEGFA-219ENST00000518824 CUL4AQ13619 759 aa14.92□□□□□ -0.02
VEGFA-219ENST00000518824 GNL2Q13823 731 aaKnown RBP14.92□□□□□ -0.02
VEGFA-219ENST00000518824 KSR1Q8IVT5 923 aa14.92□□□□□ -0.02
VEGFA-219ENST00000518824 TPH2Q8IWU9 490 aa14.92□□□□□ -0.02
VEGFA-219ENST00000518824 C4orf19Q8IY42 314 aa14.92□□□□□ -0.02
VEGFA-219ENST00000518824 USP38Q8NB14 1042 aa14.92□□□□□ -0.02
VEGFA-219ENST00000518824 ARNTL2Q8WYA1 636 aa14.92□□□□□ -0.02
VEGFA-219ENST00000518824 RAD9AQ99638 391 aa14.92□□□□□ -0.02
VEGFA-219ENST00000518824 HSD17B14Q9BPX1 270 aa14.92□□□□□ -0.02
VEGFA-219ENST00000518824 CYP26B1Q9NR63 512 aa14.92□□□□□ -0.02
VEGFA-219ENST00000518824 MTUS1Q9ULD2 1270 aa14.92□□□□□ -0.02
VEGFA-219ENST00000518824 SMC3Q9UQE7 1217 aa14.92□□□□□ -0.02
VEGFA-219ENST00000518824 SQORQ9Y6N5 450 aa14.92□□□□□ -0.02
VEGFA-219ENST00000518824 MAFO75444 373 aaPredicted RBP14.91□□□□□ -0.02
VEGFA-219ENST00000518824 MED24O75448 989 aa14.91□□□□□ -0.02
VEGFA-219ENST00000518824 RPS6KA5O75582 802 aa14.91□□□□□ -0.02
VEGFA-219ENST00000518824 RPLP2P05387 115 aaKnown RBP14.91□□□□□ -0.02
VEGFA-219ENST00000518824 SPATA31C1P0DKV0 1188 aa14.91□□□□□ -0.02
VEGFA-219ENST00000518824 IBSPP21815 317 aaPredicted RBP14.91□□□□□ -0.02
VEGFA-219ENST00000518824 YWHABP31946 246 aaKnown RBP14.91□□□□□ -0.02
VEGFA-219ENST00000518824 TECP42680 631 aa14.91□□□□□ -0.02
VEGFA-219ENST00000518824 GATMP50440 423 aa14.91□□□□□ -0.02
VEGFA-219ENST00000518824 GPC3P51654 580 aa14.91□□□□□ -0.02
VEGFA-219ENST00000518824 CRYBB1P53674 252 aaPredicted RBP14.91□□□□□ -0.02
VEGFA-219ENST00000518824 PAK2Q13177 524 aa14.91□□□□□ -0.02
VEGFA-219ENST00000518824 IL17AQ16552 155 aa14.91□□□□□ -0.02
VEGFA-219ENST00000518824 MCTP1Q6DN14 999 aa14.91□□□□□ -0.02
VEGFA-219ENST00000518824 CRIPAKQ8N1N5 446 aa14.91□□□□□ -0.02
VEGFA-219ENST00000518824 CEP170P1Q96L14 293 aa14.91□□□□□ -0.02
VEGFA-219ENST00000518824 C17orf80Q9BSJ5 609 aa14.91□□□□□ -0.02
VEGFA-219ENST00000518824 FOXD4L1Q9NU39 408 aa14.91□□□□□ -0.02
VEGFA-219ENST00000518824 ST3GAL5Q9UNP4 418 aa14.91□□□□□ -0.02
VEGFA-219ENST00000518824 LPXNO60711 386 aa14.9□□□□□ -0.02
VEGFA-219ENST00000518824 OR52Z1P0C646 297 aa14.9□□□□□ -0.02
VEGFA-219ENST00000518824 ECM1Q16610 540 aa14.9□□□□□ -0.02
VEGFA-219ENST00000518824 MAFAQ8NHW3 353 aaPredicted RBP14.9□□□□□ -0.02
VEGFA-219ENST00000518824 SP7Q8TDD2 431 aaPredicted RBP14.9□□□□□ -0.02
VEGFA-219ENST00000518824 PIGOQ8TEQ8 1089 aa14.9□□□□□ -0.02
VEGFA-219ENST00000518824 TMEM143Q96AN5 459 aa14.9□□□□□ -0.02
VEGFA-219ENST00000518824 MAP7D2Q96T17 732 aa14.9□□□□□ -0.02
VEGFA-219ENST00000518824 TSPYL2Q9H2G4 693 aaPredicted RBP14.9□□□□□ -0.02
VEGFA-219ENST00000518824 ZSWIM4Q9H7M6 989 aa14.9□□□□□ -0.02
VEGFA-219ENST00000518824 RC3H2Q9HBD1 1191 aaKnown RBP14.9□□□□□ -0.02
VEGFA-219ENST00000518824 XPNPEP1Q9NQW7 623 aa14.9□□□□□ -0.02
VEGFA-219ENST00000518824 EYSQ5T1H1 3165 aa14.9□□□□□ -0.02
VEGFA-219ENST00000518824 NLRC5Q86WI3 1866 aa14.89□□□□□ -0.03
VEGFA-219ENST00000518824 A0A087WZ62 844 aa14.89□□□□□ -0.03
VEGFA-219ENST00000518824 LINC00271P0C7V0 271 aa14.89□□□□□ -0.03
VEGFA-219ENST00000518824 IGFBP4P22692 258 aa14.89□□□□□ -0.03
VEGFA-219ENST00000518824 TMOD1P28289 359 aa14.89□□□□□ -0.03
VEGFA-219ENST00000518824 PTGDRQ13258 359 aa14.89□□□□□ -0.03
VEGFA-219ENST00000518824 DSC3Q14574 896 aa14.89□□□□□ -0.03
VEGFA-219ENST00000518824 XKR9Q5GH70 373 aa14.89□□□□□ -0.03
VEGFA-219ENST00000518824 LARP1BQ659C4 914 aaKnown RBP14.89□□□□□ -0.03
VEGFA-219ENST00000518824 CATSPER3Q86XQ3 398 aa14.89□□□□□ -0.03
VEGFA-219ENST00000518824 RHPN2Q8IUC4 686 aa14.89□□□□□ -0.03
VEGFA-219ENST00000518824 GDPD5Q8WTR4 605 aa14.89□□□□□ -0.03
VEGFA-219ENST00000518824 PPM1EQ8WY54 764 aa14.89□□□□□ -0.03
VEGFA-219ENST00000518824 ADAM2Q99965 735 aa14.89□□□□□ -0.03
VEGFA-219ENST00000518824 FDXACB1Q9BRP7 624 aaPredicted RBP14.89□□□□□ -0.03
VEGFA-219ENST00000518824 DHX33Q9H6R0 707 aaKnown RBP14.89□□□□□ -0.03
VEGFA-219ENST00000518824 PRDM6Q9NQX0 595 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms