RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 RNF19AQ9NV58 838 aa12.96□□□□□ -0.33
CTNNA1-205ENST00000517904 SORCS3Q9UPU3 1222 aa12.96□□□□□ -0.33
CTNNA1-205ENST00000517904 SH2B2O14492 632 aaPredicted RBP12.95□□□□□ -0.34
CTNNA1-205ENST00000517904 GPR182O15218 404 aa12.95□□□□□ -0.34
CTNNA1-205ENST00000517904 PRC1O43663 620 aa12.95□□□□□ -0.34
CTNNA1-205ENST00000517904 HOXB8P17481 243 aaPredicted RBP12.95□□□□□ -0.34
CTNNA1-205ENST00000517904 CHMLP26374 656 aa12.95□□□□□ -0.34
CTNNA1-205ENST00000517904 NBL1P41271 181 aa12.95□□□□□ -0.34
CTNNA1-205ENST00000517904 GNAQP50148 359 aa12.95□□□□□ -0.34
CTNNA1-205ENST00000517904 SLC26A2P50443 739 aa12.95□□□□□ -0.34
CTNNA1-205ENST00000517904 FOXK2Q01167 660 aa12.95□□□□□ -0.34
CTNNA1-205ENST00000517904 MTMR3Q13615 1198 aa12.95□□□□□ -0.34
CTNNA1-205ENST00000517904 AAMPQ13685 434 aa12.95□□□□□ -0.34
CTNNA1-205ENST00000517904 DSC3Q14574 896 aa12.95□□□□□ -0.34
CTNNA1-205ENST00000517904 KIZQ2M2Z5 673 aa12.95□□□□□ -0.34
CTNNA1-205ENST00000517904 TTC22Q5TAA0 569 aa12.95□□□□□ -0.34
CTNNA1-205ENST00000517904 KCNT2Q6UVM3 1135 aa12.95□□□□□ -0.34
CTNNA1-205ENST00000517904 FAM43BQ6ZT52 329 aaPredicted RBP12.95□□□□□ -0.34
CTNNA1-205ENST00000517904 CCDC60Q8IWA6 550 aaPredicted RBP12.95□□□□□ -0.34
CTNNA1-205ENST00000517904 CCDC82Q8N4S0 544 aa12.95□□□□□ -0.34
CTNNA1-205ENST00000517904 CASD1Q96PB1 797 aa12.95□□□□□ -0.34
CTNNA1-205ENST00000517904 ELAC1Q9H777 363 aaKnown RBP12.95□□□□□ -0.34
CTNNA1-205ENST00000517904 NGRNQ9NPE2 291 aaKnown RBP12.95□□□□□ -0.34
CTNNA1-205ENST00000517904 NR2E1Q9Y466 385 aa12.95□□□□□ -0.34
CTNNA1-205ENST00000517904 DDX39AO00148 427 aaKnown RBP12.94□□□□□ -0.34
CTNNA1-205ENST00000517904 HBP1O60381 514 aa12.94□□□□□ -0.34
CTNNA1-205ENST00000517904 VTNP04004 478 aa12.94□□□□□ -0.34
CTNNA1-205ENST00000517904 ASGR2P07307 311 aa12.94□□□□□ -0.34
CTNNA1-205ENST00000517904 WEE2P0C1S8 567 aa12.94□□□□□ -0.34
CTNNA1-205ENST00000517904 ATP4AP20648 1035 aa12.94□□□□□ -0.34
CTNNA1-205ENST00000517904 CEP55Q53EZ4 464 aa12.94□□□□□ -0.34
CTNNA1-205ENST00000517904 TYW1BQ6NUM6 668 aa12.94□□□□□ -0.34
CTNNA1-205ENST00000517904 ABHD15Q6UXT9 468 aa12.94□□□□□ -0.34
CTNNA1-205ENST00000517904 NFXL1Q6ZNB6 911 aa12.94□□□□□ -0.34
CTNNA1-205ENST00000517904 HEATR3Q7Z4Q2 680 aa12.94□□□□□ -0.34
CTNNA1-205ENST00000517904 UBALD2Q8IYN6 164 aa12.94□□□□□ -0.34
CTNNA1-205ENST00000517904 CASP10Q92851 521 aa12.94□□□□□ -0.34
CTNNA1-205ENST00000517904 MAP4K1Q92918 833 aa12.94□□□□□ -0.34
CTNNA1-205ENST00000517904 TMEM117Q9H0C3 514 aa12.94□□□□□ -0.34
CTNNA1-205ENST00000517904 ADAM7Q9H2U9 754 aa12.94□□□□□ -0.34
CTNNA1-205ENST00000517904 PUF60Q9UHX1 559 aaKnown RBP12.94□□□□□ -0.34
CTNNA1-205ENST00000517904 HCFC2Q9Y5Z7 792 aa12.94□□□□□ -0.34
CTNNA1-205ENST00000517904 COL1A2P08123 1366 aa12.94□□□□□ -0.34
CTNNA1-205ENST00000517904 C2orf71A6NGG8 1288 aa12.93□□□□□ -0.34
CTNNA1-205ENST00000517904 CCDC69A6NI79 296 aa12.93□□□□□ -0.34
CTNNA1-205ENST00000517904 MEIS1O00470 390 aa12.93□□□□□ -0.34
CTNNA1-205ENST00000517904 BACH1O14867 736 aa12.93□□□□□ -0.34
CTNNA1-205ENST00000517904 SGSM2O43147 1006 aa12.93□□□□□ -0.34
CTNNA1-205ENST00000517904 GPR32O75388 356 aa12.93□□□□□ -0.34
CTNNA1-205ENST00000517904 C22orf31O95567 290 aa12.93□□□□□ -0.34
CTNNA1-205ENST00000517904 CRYBB1P53674 252 aaPredicted RBP12.93□□□□□ -0.34
CTNNA1-205ENST00000517904 ODR4Q5SWX8 454 aa12.93□□□□□ -0.34
CTNNA1-205ENST00000517904 WWC2Q6AWC2 1192 aa12.93□□□□□ -0.34
CTNNA1-205ENST00000517904 CASC1Q6TDU7 716 aa12.93□□□□□ -0.34
CTNNA1-205ENST00000517904 TMTC3Q6ZXV5 915 aa12.93□□□□□ -0.34
CTNNA1-205ENST00000517904 TMC7Q7Z402 723 aa12.93□□□□□ -0.34
CTNNA1-205ENST00000517904 FRMD5Q7Z6J6 570 aa12.93□□□□□ -0.34
CTNNA1-205ENST00000517904 FEZF2Q8TBJ5 459 aa12.93□□□□□ -0.34
CTNNA1-205ENST00000517904 RUFY2Q8WXA3 655 aa12.93□□□□□ -0.34
CTNNA1-205ENST00000517904 ZNF558Q96NG5 402 aa12.93□□□□□ -0.34
CTNNA1-205ENST00000517904 RBM8AQ9Y5S9 174 aaKnown RBP12.93□□□□□ -0.34
CTNNA1-205ENST00000517904 EP300Q09472 2414 aaPredicted RBP12.93□□□□□ -0.34
CTNNA1-205ENST00000517904 DHX15O43143 795 aaKnown RBP12.92□□□□□ -0.34
CTNNA1-205ENST00000517904 CLASP2O75122 1294 aaKnown RBP12.92□□□□□ -0.34
CTNNA1-205ENST00000517904 PPM1AP35813 382 aa12.92□□□□□ -0.34
CTNNA1-205ENST00000517904 ITIH3Q06033 890 aa12.92□□□□□ -0.34
CTNNA1-205ENST00000517904 TPRNQ4KMQ1 711 aa12.92□□□□□ -0.34
CTNNA1-205ENST00000517904 ZNF484Q5JVG2 852 aa12.92□□□□□ -0.34
CTNNA1-205ENST00000517904 CLLU1OSQ5K130 101 aa12.92□□□□□ -0.34
CTNNA1-205ENST00000517904 FAM160B1Q5W0V3 765 aa12.92□□□□□ -0.34
CTNNA1-205ENST00000517904 ASTLQ6HA08 431 aaPredicted RBP12.92□□□□□ -0.34
CTNNA1-205ENST00000517904 CES5AQ6NT32 575 aa12.92□□□□□ -0.34
CTNNA1-205ENST00000517904 SWSAP1Q6NVH7 229 aa12.92□□□□□ -0.34
CTNNA1-205ENST00000517904 KANK3Q6NY19 840 aa12.92□□□□□ -0.34
CTNNA1-205ENST00000517904 PDXDC2PQ6P474 469 aa12.92□□□□□ -0.34
CTNNA1-205ENST00000517904 LRRC43Q8N309 656 aa12.92□□□□□ -0.34
CTNNA1-205ENST00000517904 MRPL43Q8N983 215 aaKnown RBP12.92□□□□□ -0.34
CTNNA1-205ENST00000517904 NECTIN4Q96NY8 510 aa12.92□□□□□ -0.34
CTNNA1-205ENST00000517904 MTA3Q9BTC8 594 aa12.92□□□□□ -0.34
CTNNA1-205ENST00000517904 ANO3Q9BYT9 981 aa12.92□□□□□ -0.34
CTNNA1-205ENST00000517904 RIC8AQ9NPQ8 531 aa12.92□□□□□ -0.34
CTNNA1-205ENST00000517904 ZNF302Q9NR11 478 aa12.92□□□□□ -0.34
CTNNA1-205ENST00000517904 SPG21Q9NZD8 308 aa12.92□□□□□ -0.34
CTNNA1-205ENST00000517904 FAM86B1E9PN63 330 aa12.91□□□□□ -0.34
CTNNA1-205ENST00000517904 FAM86B2P0C5J1 330 aa12.91□□□□□ -0.34
CTNNA1-205ENST00000517904 CALM1P0DP23 149 aa12.91□□□□□ -0.34
CTNNA1-205ENST00000517904 CALM2P0DP24 149 aa12.91□□□□□ -0.34
CTNNA1-205ENST00000517904 CALM3P0DP25 149 aa12.91□□□□□ -0.34
CTNNA1-205ENST00000517904 MCM5P33992 734 aa12.91□□□□□ -0.34
CTNNA1-205ENST00000517904 SREBF1P36956 1147 aa12.91□□□□□ -0.34
CTNNA1-205ENST00000517904 LIFRP42702 1097 aa12.91□□□□□ -0.34
CTNNA1-205ENST00000517904 KRT17Q04695 432 aa12.91□□□□□ -0.34
CTNNA1-205ENST00000517904 SMC1AQ14683 1233 aaKnown RBP12.91□□□□□ -0.34
CTNNA1-205ENST00000517904 SLC39A11Q8N1S5 342 aa12.91□□□□□ -0.34
CTNNA1-205ENST00000517904 TMTC2Q8N394 836 aa12.91□□□□□ -0.34
CTNNA1-205ENST00000517904 METTL13Q8N6R0 699 aa12.91□□□□□ -0.34
CTNNA1-205ENST00000517904 C12orf76Q8N812 135 aaPredicted RBP12.91□□□□□ -0.34
CTNNA1-205ENST00000517904 FANCBQ8NB91 859 aa12.91□□□□□ -0.34
CTNNA1-205ENST00000517904 EXOC6Q8TAG9 804 aa12.91□□□□□ -0.34
CTNNA1-205ENST00000517904 TMEM87BQ96K49 555 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms