RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 SPG21Q9NZD8 308 aa12.03□□□□□ -0.48
CLDND1-231ENST00000515620 USTQ9Y2C2 406 aa12.03□□□□□ -0.48
CLDND1-231ENST00000515620 BAZ2BQ9UIF8 2168 aaKnown RBP12.03□□□□□ -0.48
CLDND1-231ENST00000515620 PIK3CDO00329 1044 aa12.02□□□□□ -0.49
CLDND1-231ENST00000515620 GPR182O15218 404 aa12.02□□□□□ -0.49
CLDND1-231ENST00000515620 TDGQ13569 410 aa12.02□□□□□ -0.49
CLDND1-231ENST00000515620 ATAT1Q5SQI0 421 aa12.02□□□□□ -0.49
CLDND1-231ENST00000515620 ODR4Q5SWX8 454 aa12.02□□□□□ -0.49
CLDND1-231ENST00000515620 ABI1Q8IZP0 508 aa12.02□□□□□ -0.49
CLDND1-231ENST00000515620 FEZF2Q8TBJ5 459 aa12.02□□□□□ -0.49
CLDND1-231ENST00000515620 RIN2Q8WYP3 895 aaPredicted RBP12.02□□□□□ -0.49
CLDND1-231ENST00000515620 CASD1Q96PB1 797 aa12.02□□□□□ -0.49
CLDND1-231ENST00000515620 SENP2Q9HC62 589 aa12.02□□□□□ -0.49
CLDND1-231ENST00000515620 DIAPH3Q9NSV4 1193 aa12.02□□□□□ -0.49
CLDND1-231ENST00000515620 SLC9A2Q9UBY0 812 aa12.02□□□□□ -0.49
CLDND1-231ENST00000515620 DUSP12Q9UNI6 340 aa12.02□□□□□ -0.49
CLDND1-231ENST00000515620 UBIAD1Q9Y5Z9 338 aa12.02□□□□□ -0.49
CLDND1-231ENST00000515620 TPRP12270 2363 aaKnown RBP12.01□□□□□ -0.49
CLDND1-231ENST00000515620 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.01□□□□□ -0.49
CLDND1-231ENST00000515620 STK25O00506 426 aa12.01□□□□□ -0.49
CLDND1-231ENST00000515620 HOXA2O43364 376 aa12.01□□□□□ -0.49
CLDND1-231ENST00000515620 EPCAMP16422 314 aa12.01□□□□□ -0.49
CLDND1-231ENST00000515620 RFX1P22670 979 aa12.01□□□□□ -0.49
CLDND1-231ENST00000515620 KLRC1P26715 233 aa12.01□□□□□ -0.49
CLDND1-231ENST00000515620 STAT5BP51692 787 aa12.01□□□□□ -0.49
CLDND1-231ENST00000515620 ACTR2P61160 394 aa12.01□□□□□ -0.49
CLDND1-231ENST00000515620 FAM189BP81408 668 aa12.01□□□□□ -0.49
CLDND1-231ENST00000515620 KIZQ2M2Z5 673 aa12.01□□□□□ -0.49
CLDND1-231ENST00000515620 CCDC149Q6ZUS6 474 aa12.01□□□□□ -0.49
CLDND1-231ENST00000515620 FAM228AQ86W67 206 aa12.01□□□□□ -0.49
CLDND1-231ENST00000515620 SLC39A11Q8N1S5 342 aa12.01□□□□□ -0.49
CLDND1-231ENST00000515620 TMEM87AQ8NBN3 555 aa12.01□□□□□ -0.49
CLDND1-231ENST00000515620 RNF169Q8NCN4 708 aa12.01□□□□□ -0.49
CLDND1-231ENST00000515620 AUTS2Q8WXX7 1259 aa12.01□□□□□ -0.49
CLDND1-231ENST00000515620 ACSF2Q96CM8 615 aaPredicted RBP12.01□□□□□ -0.49
CLDND1-231ENST00000515620 OSMRQ99650 979 aa12.01□□□□□ -0.49
CLDND1-231ENST00000515620 DSCC1Q9BVC3 393 aa12.01□□□□□ -0.49
CLDND1-231ENST00000515620 ELAC1Q9H777 363 aaKnown RBP12.01□□□□□ -0.49
CLDND1-231ENST00000515620 RNF19AQ9NV58 838 aa12.01□□□□□ -0.49
CLDND1-231ENST00000515620 DLL3Q9NYJ7 618 aa12.01□□□□□ -0.49
CLDND1-231ENST00000515620 DENND4AQ7Z401 1863 aa12.01□□□□□ -0.49
CLDND1-231ENST00000515620 ACACBO00763 2458 aa12.01□□□□□ -0.49
CLDND1-231ENST00000515620 IFIT3O14879 490 aaKnown RBP12□□□□□ -0.49
CLDND1-231ENST00000515620 CXCL14O95715 111 aa12□□□□□ -0.49
CLDND1-231ENST00000515620 METAP2P50579 478 aaKnown RBP eCLIP12□□□□□ -0.49
CLDND1-231ENST00000515620 TROAPQ12815 778 aa12□□□□□ -0.49
CLDND1-231ENST00000515620 DSC3Q14574 896 aa12□□□□□ -0.49
CLDND1-231ENST00000515620 UBE2SQ16763 222 aa12□□□□□ -0.49
CLDND1-231ENST00000515620 TMC5Q6UXY8 1006 aa12□□□□□ -0.49
CLDND1-231ENST00000515620 FAM43BQ6ZT52 329 aaPredicted RBP12□□□□□ -0.49
CLDND1-231ENST00000515620 OTOP3Q7RTS5 596 aa12□□□□□ -0.49
CLDND1-231ENST00000515620 PLPPR4Q7Z2D5 763 aa12□□□□□ -0.49
CLDND1-231ENST00000515620 KIAA0319LQ8IZA0 1049 aa12□□□□□ -0.49
CLDND1-231ENST00000515620 RRP36Q96EU6 259 aaKnown RBP12□□□□□ -0.49
CLDND1-231ENST00000515620 KCNK12Q9HB15 430 aa12□□□□□ -0.49
CLDND1-231ENST00000515620 JADE2Q9NQC1 790 aa12□□□□□ -0.49
CLDND1-231ENST00000515620 OTOGLQ3ZCN5 2332 aa12□□□□□ -0.49
CLDND1-231ENST00000515620 ERICH2A1L162 156 aa11.99□□□□□ -0.49
CLDND1-231ENST00000515620 SPDYE4A6NLX3 237 aa11.99□□□□□ -0.49
CLDND1-231ENST00000515620 NT5C1B-RDH14C9J2C7 533 aa11.99□□□□□ -0.49
CLDND1-231ENST00000515620 NARSO43776 548 aaKnown RBP11.99□□□□□ -0.49
CLDND1-231ENST00000515620 CFHP08603 1231 aa11.99□□□□□ -0.49
CLDND1-231ENST00000515620 CRYBB1P53674 252 aaPredicted RBP11.99□□□□□ -0.49
CLDND1-231ENST00000515620 BMS1Q14692 1282 aaKnown RBP11.99□□□□□ -0.49
CLDND1-231ENST00000515620 WTAPQ15007 396 aa11.99□□□□□ -0.49
CLDND1-231ENST00000515620 RSPO4Q2I0M5 234 aaPredicted RBP11.99□□□□□ -0.49
CLDND1-231ENST00000515620 CLLU1OSQ5K130 101 aa11.99□□□□□ -0.49
CLDND1-231ENST00000515620 ZC3H14Q6PJT7 736 aaKnown RBP11.99□□□□□ -0.49
CLDND1-231ENST00000515620 CABP7Q86V35 215 aa11.99□□□□□ -0.49
CLDND1-231ENST00000515620 VPS52Q8N1B4 723 aa11.99□□□□□ -0.49
CLDND1-231ENST00000515620 DCLK2Q8N568 766 aa11.99□□□□□ -0.49
CLDND1-231ENST00000515620 RUBCNQ92622 972 aa11.99□□□□□ -0.49
CLDND1-231ENST00000515620 SDF4Q9BRK5 362 aa11.99□□□□□ -0.49
CLDND1-231ENST00000515620 PSTPIP2Q9H939 334 aa11.99□□□□□ -0.49
CLDND1-231ENST00000515620 KCNH7Q9NS40 1196 aa11.99□□□□□ -0.49
CLDND1-231ENST00000515620 SEC63Q9UGP8 760 aaKnown RBP11.99□□□□□ -0.49
CLDND1-231ENST00000515620 KRBA1A5PL33 1030 aa11.98□□□□□ -0.49
CLDND1-231ENST00000515620 SPDYE3A6NKU9 549 aa11.98□□□□□ -0.49
CLDND1-231ENST00000515620 MAFGO15525 162 aa11.98□□□□□ -0.49
CLDND1-231ENST00000515620 VTNP04004 478 aa11.98□□□□□ -0.49
CLDND1-231ENST00000515620 TRDNQ13061 729 aa11.98□□□□□ -0.49
CLDND1-231ENST00000515620 SPECC1Q5M775 1068 aa11.98□□□□□ -0.49
CLDND1-231ENST00000515620 CATIPQ7Z7H3 387 aa11.98□□□□□ -0.49
CLDND1-231ENST00000515620 ECHDC2Q86YB7 292 aa11.98□□□□□ -0.49
CLDND1-231ENST00000515620 SLC22A17Q8WUG5 538 aa11.98□□□□□ -0.49
CLDND1-231ENST00000515620 TMEM169Q96HH4 297 aa11.98□□□□□ -0.49
CLDND1-231ENST00000515620 SPZ1Q9BXG8 430 aa11.98□□□□□ -0.49
CLDND1-231ENST00000515620 LNPKQ9C0E8 428 aa11.98□□□□□ -0.49
CLDND1-231ENST00000515620 ZBP1Q9H171 429 aa11.98□□□□□ -0.49
CLDND1-231ENST00000515620 SFXN1Q9H9B4 322 aa11.98□□□□□ -0.49
CLDND1-231ENST00000515620 TBC1D17Q9HA65 648 aa11.98□□□□□ -0.49
CLDND1-231ENST00000515620 CA14Q9ULX7 337 aa11.98□□□□□ -0.49
CLDND1-231ENST00000515620 ZFHX4Q86UP3 3567 aa11.97□□□□□ -0.49
CLDND1-231ENST00000515620 COL1A2P08123 1366 aa11.97□□□□□ -0.49
CLDND1-231ENST00000515620 NFASCO94856 1347 aa11.97□□□□□ -0.49
CLDND1-231ENST00000515620 BACH1O14867 736 aa11.97□□□□□ -0.49
CLDND1-231ENST00000515620 HBP1O60381 514 aa11.97□□□□□ -0.49
CLDND1-231ENST00000515620 GPR32O75388 356 aa11.97□□□□□ -0.49
CLDND1-231ENST00000515620 SP9P0CG40 484 aa11.97□□□□□ -0.49
CLDND1-231ENST00000515620 ALDH7A1P49419 539 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms