RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 VWCEQ96DN2 955 aa28.98■■■□□ 2.23
DDR1-279ENST00000515529 PPP1R16BQ96T49 567 aa28.98■■■□□ 2.23
DDR1-279ENST00000515529 CLIC4Q9Y696 253 aa28.98■■■□□ 2.23
DDR1-279ENST00000515529 SLC4A7Q9Y6M7 1214 aa28.98■■■□□ 2.23
DDR1-279ENST00000515529 ZBTB39O15060 712 aa28.97■■■□□ 2.23
DDR1-279ENST00000515529 EFCAB14O75071 495 aa28.97■■■□□ 2.23
DDR1-279ENST00000515529 POTEGQ6S5H5 508 aa28.97■■■□□ 2.23
DDR1-279ENST00000515529 USP38Q8NB14 1042 aa28.97■■■□□ 2.23
DDR1-279ENST00000515529 DBF4BQ8NFT6 615 aa28.97■■■□□ 2.23
DDR1-279ENST00000515529 APBB2Q92870 758 aa28.97■■■□□ 2.23
DDR1-279ENST00000515529 CEP89Q96ST8 783 aa28.97■■■□□ 2.23
DDR1-279ENST00000515529 IFIH1Q9BYX4 1025 aaKnown RBP28.97■■■□□ 2.23
DDR1-279ENST00000515529 KDM3AQ9Y4C1 1321 aa28.96■■■□□ 2.23
DDR1-279ENST00000515529 F13A1P00488 732 aa28.96■■■□□ 2.23
DDR1-279ENST00000515529 KIZQ2M2Z5 673 aa28.96■■■□□ 2.23
DDR1-279ENST00000515529 PLEKHG4Q58EX7 1191 aa28.96■■■□□ 2.23
DDR1-279ENST00000515529 FBXO47Q5MNV8 452 aa28.96■■■□□ 2.23
DDR1-279ENST00000515529 TSHZ1Q6ZSZ6 1077 aa28.96■■■□□ 2.23
DDR1-279ENST00000515529 LINC01465Q8N7H1 131 aa28.96■■■□□ 2.23
DDR1-279ENST00000515529 CXXC1Q9P0U4 656 aaPredicted RBP28.96■■■□□ 2.23
DDR1-279ENST00000515529 SQORQ9Y6N5 450 aa28.96■■■□□ 2.23
DDR1-279ENST00000515529 EVPLQ92817 2033 aa28.95■■■□□ 2.23
DDR1-279ENST00000515529 ABHD14A-ACY1A0A1B0GW23 586 aa28.95■■■□□ 2.22
DDR1-279ENST00000515529 PP2D1A8MPX8 630 aa28.95■■■□□ 2.22
DDR1-279ENST00000515529 GAS2O43903 313 aaKnown RBP28.95■■■□□ 2.22
DDR1-279ENST00000515529 CDC42EP1Q00587 391 aa28.95■■■□□ 2.22
DDR1-279ENST00000515529 LPIN1Q14693 890 aa28.95■■■□□ 2.22
DDR1-279ENST00000515529 EMC2Q15006 297 aa28.95■■■□□ 2.22
DDR1-279ENST00000515529 ZRSR1Q15695 479 aaKnown RBP28.95■■■□□ 2.22
DDR1-279ENST00000515529 RASIP1Q5U651 963 aa28.95■■■□□ 2.22
DDR1-279ENST00000515529 ZNF579Q8NAF0 562 aaKnown RBP28.95■■■□□ 2.22
DDR1-279ENST00000515529 AK8Q96MA6 479 aa28.95■■■□□ 2.22
DDR1-279ENST00000515529 BMP2KQ9NSY1 1161 aaPredicted RBP28.95■■■□□ 2.22
DDR1-279ENST00000515529 SUCLA2Q9P2R7 463 aaPredicted RBP28.95■■■□□ 2.22
DDR1-279ENST00000515529 IGKV6-21A0A0C4DH24 114 aa28.94■■■□□ 2.22
DDR1-279ENST00000515529 RARRES1P49788 294 aa28.94■■■□□ 2.22
DDR1-279ENST00000515529 CRYBB1P53674 252 aaPredicted RBP28.94■■■□□ 2.22
DDR1-279ENST00000515529 NLRP11P59045 1033 aaKnown RBP28.94■■■□□ 2.22
DDR1-279ENST00000515529 ODR4Q5SWX8 454 aa28.94■■■□□ 2.22
DDR1-279ENST00000515529 TCP11Q8WWU5 503 aa28.94■■■□□ 2.22
DDR1-279ENST00000515529 NLRP7Q8WX94 980 aa28.94■■■□□ 2.22
DDR1-279ENST00000515529 CDK5RAP3Q96JB5 506 aa28.94■■■□□ 2.22
DDR1-279ENST00000515529 MTRQ99707 1265 aa28.94■■■□□ 2.22
DDR1-279ENST00000515529 DHX33Q9H6R0 707 aaKnown RBP28.94■■■□□ 2.22
DDR1-279ENST00000515529 ATP6V0A4Q9HBG4 840 aa28.94■■■□□ 2.22
DDR1-279ENST00000515529 DBR1Q9UK59 544 aaKnown RBP28.94■■■□□ 2.22
DDR1-279ENST00000515529 KIAA1024Q9UPX6 916 aa28.94■■■□□ 2.22
DDR1-279ENST00000515529 A0A087WWV3 80 aa28.93■■■□□ 2.22
DDR1-279ENST00000515529 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.93■■■□□ 2.22
DDR1-279ENST00000515529 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.93■■■□□ 2.22
DDR1-279ENST00000515529 ARHGEF35A5YM69 484 aa28.93■■■□□ 2.22
DDR1-279ENST00000515529 DGAT1O75907 488 aa28.93■■■□□ 2.22
DDR1-279ENST00000515529 CDC25AP30304 524 aa28.93■■■□□ 2.22
DDR1-279ENST00000515529 LONP1P36776 959 aaKnown RBP28.93■■■□□ 2.22
DDR1-279ENST00000515529 PAK2Q13177 524 aa28.93■■■□□ 2.22
DDR1-279ENST00000515529 USP28Q96RU2 1077 aa28.93■■■□□ 2.22
DDR1-279ENST00000515529 OSMRQ99650 979 aa28.93■■■□□ 2.22
DDR1-279ENST00000515529 DDX19AQ9NUU7 478 aaKnown RBP28.93■■■□□ 2.22
DDR1-279ENST00000515529 MARCKSP29966 332 aaPredicted RBP28.92■■■□□ 2.22
DDR1-279ENST00000515529 STK38Q15208 465 aa28.92■■■□□ 2.22
DDR1-279ENST00000515529 PTPAQ15257 358 aa28.92■■■□□ 2.22
DDR1-279ENST00000515529 RHPN2Q8IUC4 686 aa28.92■■■□□ 2.22
DDR1-279ENST00000515529 TET1Q8NFU7 2136 aa28.92■■■□□ 2.22
DDR1-279ENST00000515529 PSPC1Q8WXF1 523 aaKnown RBP28.92■■■□□ 2.22
DDR1-279ENST00000515529 SLC9A7Q96T83 725 aa28.92■■■□□ 2.22
DDR1-279ENST00000515529 OSBPL7Q9BZF2 842 aa28.92■■■□□ 2.22
DDR1-279ENST00000515529 RANBP2P49792 3224 aaKnown RBP28.91■■■□□ 2.22
DDR1-279ENST00000515529 USO1O60763 962 aaKnown RBP28.91■■■□□ 2.22
DDR1-279ENST00000515529 GPR32O75388 356 aa28.91■■■□□ 2.22
DDR1-279ENST00000515529 RPS6KA5O75582 802 aa28.91■■■□□ 2.22
DDR1-279ENST00000515529 ATP2A2P16615 1042 aaKnown RBP28.91■■■□□ 2.22
DDR1-279ENST00000515529 CD52P31358 61 aa28.91■■■□□ 2.22
DDR1-279ENST00000515529 UBA7P41226 1012 aa28.91■■■□□ 2.22
DDR1-279ENST00000515529 MKRN4PQ13434 485 aaPredicted RBP28.91■■■□□ 2.22
DDR1-279ENST00000515529 DRP2Q13474 957 aa28.91■■■□□ 2.22
DDR1-279ENST00000515529 PKP1Q13835 747 aa28.91■■■□□ 2.22
DDR1-279ENST00000515529 FOXD4L6Q3SYB3 417 aaPredicted RBP28.91■■■□□ 2.22
DDR1-279ENST00000515529 FOXD4L3Q6VB84 417 aaPredicted RBP28.91■■■□□ 2.22
DDR1-279ENST00000515529 RASSF8Q8NHQ8 419 aa28.91■■■□□ 2.22
DDR1-279ENST00000515529 TMEM143Q96AN5 459 aa28.91■■■□□ 2.22
DDR1-279ENST00000515529 NT5C3AQ9H0P0 336 aa28.91■■■□□ 2.22
DDR1-279ENST00000515529 DAXXQ9UER7 740 aaPredicted RBP28.91■■■□□ 2.22
DDR1-279ENST00000515529 DNM3Q9UQ16 869 aa28.91■■■□□ 2.22
DDR1-279ENST00000515529 GPC3P51654 580 aa28.9■■■□□ 2.22
DDR1-279ENST00000515529 WDR5P61964 334 aaKnown RBP28.9■■■□□ 2.22
DDR1-279ENST00000515529 CABP7Q86V35 215 aa28.9■■■□□ 2.22
DDR1-279ENST00000515529 CALML4Q96GE6 196 aa28.9■■■□□ 2.22
DDR1-279ENST00000515529 ZNF668Q96K58 619 aaPredicted RBP28.9■■■□□ 2.22
DDR1-279ENST00000515529 CDHR5Q9HBB8 845 aa28.9■■■□□ 2.22
DDR1-279ENST00000515529 AMHP03971 560 aa28.89■■■□□ 2.22
DDR1-279ENST00000515529 SMAD3P84022 425 aaKnown RBP28.89■■■□□ 2.22
DDR1-279ENST00000515529 NFX1Q12986 1120 aaKnown RBP28.89■■■□□ 2.22
DDR1-279ENST00000515529 SLC39A14Q15043 492 aa28.89■■■□□ 2.22
DDR1-279ENST00000515529 ECM1Q16610 540 aa28.89■■■□□ 2.22
DDR1-279ENST00000515529 TCTN1Q2MV58 587 aa28.89■■■□□ 2.22
DDR1-279ENST00000515529 ZNF410Q86VK4 478 aa28.89■■■□□ 2.22
DDR1-279ENST00000515529 NLRP4Q96MN2 994 aa28.89■■■□□ 2.22
DDR1-279ENST00000515529 MMTAG2Q9BU76 263 aaKnown RBP28.89■■■□□ 2.22
DDR1-279ENST00000515529 GCOM2Q9BZD3 368 aaPredicted RBP28.89■■■□□ 2.22
DDR1-279ENST00000515529 ADAMTS10Q9H324 1103 aa28.89■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms