RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 TMTC3Q6ZXV5 915 aa15.5■□□□□ 0.07
TRIO-222ENST00000515144 RGL1Q9NZL6 768 aa15.5■□□□□ 0.07
TRIO-222ENST00000515144 PDE1BQ01064 536 aa15.5■□□□□ 0.07
TRIO-222ENST00000515144 TTC1Q99614 292 aa15.5■□□□□ 0.07
TRIO-222ENST00000515144 CUEDC2Q9H467 287 aa15.5■□□□□ 0.07
TRIO-222ENST00000515144 ATP1A2P50993 1020 aa15.5■□□□□ 0.07
TRIO-222ENST00000515144 ISCA1Q9BUE6 129 aa15.5■□□□□ 0.07
TRIO-222ENST00000515144 NEXMIFQ5QGS0 1516 aa15.5■□□□□ 0.07
TRIO-222ENST00000515144 CHGBP05060 677 aa15.5■□□□□ 0.07
TRIO-222ENST00000515144 QARSP47897 775 aaKnown RBP15.5■□□□□ 0.07
TRIO-222ENST00000515144 HP1BP3Q5SSJ5 553 aaPredicted RBP15.5■□□□□ 0.07
TRIO-222ENST00000515144 MRPL4Q9BYD3 311 aaKnown RBP15.5■□□□□ 0.07
TRIO-222ENST00000515144 SLC9A2Q9UBY0 812 aa15.5■□□□□ 0.07
TRIO-222ENST00000515144 C10orf76Q5T2E6 689 aa15.5■□□□□ 0.07
TRIO-222ENST00000515144 SUCLA2Q9P2R7 463 aaPredicted RBP15.5■□□□□ 0.07
TRIO-222ENST00000515144 NRBP1Q9UHY1 535 aa15.5■□□□□ 0.07
TRIO-222ENST00000515144 SRPRBQ9Y5M8 271 aaKnown RBP15.5■□□□□ 0.07
TRIO-222ENST00000515144 TDP2O95551 362 aa15.49■□□□□ 0.07
TRIO-222ENST00000515144 YWHABP31946 246 aaKnown RBP15.49■□□□□ 0.07
TRIO-222ENST00000515144 GBP1P32455 592 aa15.49■□□□□ 0.07
TRIO-222ENST00000515144 STX2P32856 288 aa15.49■□□□□ 0.07
TRIO-222ENST00000515144 SFR1Q86XK3 245 aa15.49■□□□□ 0.07
TRIO-222ENST00000515144 STK17AQ9UEE5 414 aa15.49■□□□□ 0.07
TRIO-222ENST00000515144 CAMTA2O94983 1202 aa15.49■□□□□ 0.07
TRIO-222ENST00000515144 MYL1P05976 194 aa15.49■□□□□ 0.07
TRIO-222ENST00000515144 GARSP41250 739 aaKnown RBP15.49■□□□□ 0.07
TRIO-222ENST00000515144 HS1BP3Q53T59 392 aa15.49■□□□□ 0.07
TRIO-222ENST00000515144 DEPDC1BQ8WUY9 529 aa15.49■□□□□ 0.07
TRIO-222ENST00000515144 FZD1Q9UP38 647 aa15.49■□□□□ 0.07
TRIO-222ENST00000515144 NOL3O60936 208 aaKnown RBP15.49■□□□□ 0.07
TRIO-222ENST00000515144 ATP11AP98196 1134 aa15.49■□□□□ 0.07
TRIO-222ENST00000515144 PFKFB3Q16875 520 aaPredicted RBP15.49■□□□□ 0.07
TRIO-222ENST00000515144 OSBPL5Q9H0X9 879 aaPredicted RBP15.49■□□□□ 0.07
TRIO-222ENST00000515144 GSG1L2A8MUP6 293 aa15.49■□□□□ 0.07
TRIO-222ENST00000515144 OR1G1P47890 313 aa15.49■□□□□ 0.07
TRIO-222ENST00000515144 IFT43Q96FT9 208 aa15.49■□□□□ 0.07
TRIO-222ENST00000515144 SYNDIG1LA6NDD5 238 aa15.49■□□□□ 0.07
TRIO-222ENST00000515144 IFNAR1P17181 557 aa15.49■□□□□ 0.07
TRIO-222ENST00000515144 SURF1Q15526 300 aa15.49■□□□□ 0.07
TRIO-222ENST00000515144 DHTKD1Q96HY7 919 aaPredicted RBP15.49■□□□□ 0.07
TRIO-222ENST00000515144 CRAMP1Q96RY5 1269 aa15.49■□□□□ 0.07
TRIO-222ENST00000515144 MYO10Q9HD67 2058 aa15.49■□□□□ 0.07
TRIO-222ENST00000515144 TRIM49BA6NDI0 452 aa15.48■□□□□ 0.07
TRIO-222ENST00000515144 TUBB4BP68371 445 aa15.48■□□□□ 0.07
TRIO-222ENST00000515144 MAN2A1Q16706 1144 aa15.48■□□□□ 0.07
TRIO-222ENST00000515144 VSIG1Q86XK7 387 aa15.48■□□□□ 0.07
TRIO-222ENST00000515144 LRRD1A4D1F6 860 aa15.48■□□□□ 0.07
TRIO-222ENST00000515144 DDNO94850 711 aaPredicted RBP15.48■□□□□ 0.07
TRIO-222ENST00000515144 ZNF853P0CG23 659 aa15.48■□□□□ 0.07
TRIO-222ENST00000515144 CDC27P30260 824 aa15.48■□□□□ 0.07
TRIO-222ENST00000515144 ARFGAP2Q8N6H7 521 aa15.48■□□□□ 0.07
TRIO-222ENST00000515144 P3H4Q92791 437 aa15.48■□□□□ 0.07
TRIO-222ENST00000515144 FAM167AQ96KS9 214 aa15.48■□□□□ 0.07
TRIO-222ENST00000515144 MAGEF1Q9HAY2 307 aa15.48■□□□□ 0.07
TRIO-222ENST00000515144 MAP3K20Q9NYL2 800 aaKnown RBP15.48■□□□□ 0.07
TRIO-222ENST00000515144 PPP2R2CQ9Y2T4 447 aa15.48■□□□□ 0.07
TRIO-222ENST00000515144 DAGLAQ9Y4D2 1042 aa15.48■□□□□ 0.07
TRIO-222ENST00000515144 MYH10P35580 1976 aa15.48■□□□□ 0.07
TRIO-222ENST00000515144 GOLGA8MH3BSY2 632 aa15.48■□□□□ 0.07
TRIO-222ENST00000515144 GUCY2DQ02846 1103 aa15.48■□□□□ 0.07
TRIO-222ENST00000515144 C2orf54Q08AI8 447 aa15.48■□□□□ 0.07
TRIO-222ENST00000515144 FSD1LQ9BXM9 530 aa15.48■□□□□ 0.07
TRIO-222ENST00000515144 ANGPTL8Q6UXH0 198 aa15.48■□□□□ 0.07
TRIO-222ENST00000515144 CDKL2Q92772 493 aa15.48■□□□□ 0.07
TRIO-222ENST00000515144 NSUN4Q96CB9 384 aaKnown RBP15.48■□□□□ 0.07
TRIO-222ENST00000515144 ASB14A6NK59 587 aa15.48■□□□□ 0.07
TRIO-222ENST00000515144 CHD4Q14839 1912 aa15.48■□□□□ 0.07
TRIO-222ENST00000515144 SOWAHDA6NJG2 315 aa15.47■□□□□ 0.07
TRIO-222ENST00000515144 PDGFRBP09619 1106 aa15.47■□□□□ 0.07
TRIO-222ENST00000515144 FBXW4P57775 412 aa15.47■□□□□ 0.07
TRIO-222ENST00000515144 TNFAIP2Q03169 654 aa15.47■□□□□ 0.07
TRIO-222ENST00000515144 JADE1Q6IE81 842 aa15.47■□□□□ 0.07
TRIO-222ENST00000515144 LRRC8AQ8IWT6 810 aa15.47■□□□□ 0.07
TRIO-222ENST00000515144 LRRC43Q8N309 656 aa15.47■□□□□ 0.07
TRIO-222ENST00000515144 HYOU1Q9Y4L1 999 aa15.47■□□□□ 0.07
TRIO-222ENST00000515144 MROH2AA6NES4 1674 aa15.47■□□□□ 0.07
TRIO-222ENST00000515144 hCG_1984214I3L0E3 225 aa15.47■□□□□ 0.07
TRIO-222ENST00000515144 NVLO15381 856 aaKnown RBP15.47■□□□□ 0.07
TRIO-222ENST00000515144 NNMTP40261 264 aa15.47■□□□□ 0.07
TRIO-222ENST00000515144 ZNF713Q8N859 430 aaPredicted RBP15.47■□□□□ 0.07
TRIO-222ENST00000515144 TYW1Q9NV66 732 aaKnown RBP15.47■□□□□ 0.07
TRIO-222ENST00000515144 WDR91A4D1P6 747 aa15.47■□□□□ 0.07
TRIO-222ENST00000515144 PRR23AA6NEV1 266 aa15.47■□□□□ 0.07
TRIO-222ENST00000515144 DFFAO00273 331 aa15.47■□□□□ 0.07
TRIO-222ENST00000515144 POLRMTO00411 1230 aaKnown RBP15.47■□□□□ 0.07
TRIO-222ENST00000515144 KLRK1P26718 216 aa15.47■□□□□ 0.07
TRIO-222ENST00000515144 ABCD1P33897 745 aa15.47■□□□□ 0.07
TRIO-222ENST00000515144 AP1B1Q10567 949 aa15.47■□□□□ 0.07
TRIO-222ENST00000515144 C11orf57Q6ZUT1 292 aaPredicted RBP15.47■□□□□ 0.07
TRIO-222ENST00000515144 TRIML1Q8N9V2 468 aa15.47■□□□□ 0.07
TRIO-222ENST00000515144 SPON2Q9BUD6 331 aa15.47■□□□□ 0.07
TRIO-222ENST00000515144 SLC4A7Q9Y6M7 1214 aa15.47■□□□□ 0.07
TRIO-222ENST00000515144 NDUFAB1O14561 156 aa15.47■□□□□ 0.07
TRIO-222ENST00000515144 GPRC5AQ8NFJ5 357 aa15.47■□□□□ 0.07
TRIO-222ENST00000515144 NUDT12Q9BQG2 462 aa15.47■□□□□ 0.07
TRIO-222ENST00000515144 NUF2Q9BZD4 464 aa15.47■□□□□ 0.07
TRIO-222ENST00000515144 MRPL47Q9HD33 250 aaKnown RBP15.47■□□□□ 0.07
TRIO-222ENST00000515144 AFF4Q9UHB7 1163 aaKnown RBP15.47■□□□□ 0.07
TRIO-222ENST00000515144 ARHGAP42A6NI28 874 aa15.47■□□□□ 0.07
TRIO-222ENST00000515144 LDHAP00338 332 aaKnown RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms