RNA–Protein interactions for RNA: ENST00000514778.1

SMAD1-213, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 616 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-213ENST00000514778 PKP1Q13835 747 aa7.93□□□□□ -1.14
SMAD1-213ENST00000514778 STK38Q15208 465 aa7.93□□□□□ -1.14
SMAD1-213ENST00000514778 TARBP2Q15633 366 aaKnown RBP7.93□□□□□ -1.14
SMAD1-213ENST00000514778 GRIK4Q16099 956 aa7.93□□□□□ -1.14
SMAD1-213ENST00000514778 IL17AQ16552 155 aa7.93□□□□□ -1.14
SMAD1-213ENST00000514778 PTGISQ16647 500 aa7.93□□□□□ -1.14
SMAD1-213ENST00000514778 FAM47CQ5HY64 1035 aa7.93□□□□□ -1.14
SMAD1-213ENST00000514778 TJAP1Q5JTD0 557 aa7.93□□□□□ -1.14
SMAD1-213ENST00000514778 MARCH8Q5T0T0 291 aa7.93□□□□□ -1.14
SMAD1-213ENST00000514778 RSPH3Q86UC2 560 aa7.93□□□□□ -1.14
SMAD1-213ENST00000514778 CATSPER3Q86XQ3 398 aa7.93□□□□□ -1.14
SMAD1-213ENST00000514778 TRIM50Q86XT4 487 aa7.93□□□□□ -1.14
SMAD1-213ENST00000514778 CKAP2LQ8IYA6 745 aa7.93□□□□□ -1.14
SMAD1-213ENST00000514778 KRI1Q8N9T8 703 aaKnown RBP7.93□□□□□ -1.14
SMAD1-213ENST00000514778 RETREG2Q8NC44 543 aa7.93□□□□□ -1.14
SMAD1-213ENST00000514778 LMBR1Q8WVP7 490 aa7.93□□□□□ -1.14
SMAD1-213ENST00000514778 DPF3Q92784 378 aa7.93□□□□□ -1.14
SMAD1-213ENST00000514778 GJA10Q969M2 543 aa7.93□□□□□ -1.14
SMAD1-213ENST00000514778 DYDC2Q96IM9 177 aa7.93□□□□□ -1.14
SMAD1-213ENST00000514778 PYM1Q9BRP8 204 aaKnown RBP7.93□□□□□ -1.14
SMAD1-213ENST00000514778 LXNQ9BS40 222 aa7.93□□□□□ -1.14
SMAD1-213ENST00000514778 CCSER1Q9C0I3 900 aa7.93□□□□□ -1.14
SMAD1-213ENST00000514778 CHMP5Q9NZZ3 219 aa7.93□□□□□ -1.14
SMAD1-213ENST00000514778 PRKAG2Q9UGJ0 569 aa7.93□□□□□ -1.14
SMAD1-213ENST00000514778 FBXO2Q9UK22 296 aaPredicted RBP7.93□□□□□ -1.14
SMAD1-213ENST00000514778 TBX21Q9UL17 535 aa7.93□□□□□ -1.14
SMAD1-213ENST00000514778 NOD1Q9Y239 953 aa7.93□□□□□ -1.14
SMAD1-213ENST00000514778 ATP11BQ9Y2G3 1177 aa7.93□□□□□ -1.14
SMAD1-213ENST00000514778 TELO2Q9Y4R8 837 aa7.93□□□□□ -1.14
SMAD1-213ENST00000514778 CLIC4Q9Y696 253 aa7.93□□□□□ -1.14
SMAD1-213ENST00000514778 SCN10AQ9Y5Y9 1956 aa7.93□□□□□ -1.14
SMAD1-213ENST00000514778 IGKV6-21A0A0C4DH24 114 aa7.92□□□□□ -1.14
SMAD1-213ENST00000514778 PQBP1O60828 265 aaKnown RBP7.92□□□□□ -1.14
SMAD1-213ENST00000514778 CUTAO60888 179 aa7.92□□□□□ -1.14
SMAD1-213ENST00000514778 RNF40O75150 1001 aa7.92□□□□□ -1.14
SMAD1-213ENST00000514778 TIMP1P01033 207 aa7.92□□□□□ -1.14
SMAD1-213ENST00000514778 TMOD1P28289 359 aa7.92□□□□□ -1.14
SMAD1-213ENST00000514778 RFC2P35250 354 aa7.92□□□□□ -1.14
SMAD1-213ENST00000514778 TXLNAP40222 546 aa7.92□□□□□ -1.14
SMAD1-213ENST00000514778 UBA7P41226 1012 aa7.92□□□□□ -1.14
SMAD1-213ENST00000514778 PRKCEQ02156 737 aa7.92□□□□□ -1.14
SMAD1-213ENST00000514778 GDF6Q6KF10 455 aaPredicted RBP7.92□□□□□ -1.14
SMAD1-213ENST00000514778 FAM173BQ6P4H8 233 aa7.92□□□□□ -1.14
SMAD1-213ENST00000514778 MTHFD1LQ6UB35 978 aa7.92□□□□□ -1.14
SMAD1-213ENST00000514778 ANO5Q75V66 913 aa7.92□□□□□ -1.14
SMAD1-213ENST00000514778 TPH2Q8IWU9 490 aa7.92□□□□□ -1.14
SMAD1-213ENST00000514778 BANK1Q8NDB2 785 aa7.92□□□□□ -1.14
SMAD1-213ENST00000514778 SLC7A3Q8WY07 619 aa7.92□□□□□ -1.14
SMAD1-213ENST00000514778 CALML4Q96GE6 196 aa7.92□□□□□ -1.14
SMAD1-213ENST00000514778 IRX2Q9BZI1 471 aaPredicted RBP7.92□□□□□ -1.14
SMAD1-213ENST00000514778 TRPV6Q9H1D0 765 aa7.92□□□□□ -1.14
SMAD1-213ENST00000514778 CYP26B1Q9NR63 512 aa7.92□□□□□ -1.14
SMAD1-213ENST00000514778 TMEM39AQ9NV64 488 aa7.92□□□□□ -1.14
SMAD1-213ENST00000514778 SETD4Q9NVD3 440 aa7.92□□□□□ -1.14
SMAD1-213ENST00000514778 RGL1Q9NZL6 768 aa7.92□□□□□ -1.14
SMAD1-213ENST00000514778 KCND2Q9NZV8 630 aa7.92□□□□□ -1.14
SMAD1-213ENST00000514778 CCDC39Q9UFE4 941 aa7.92□□□□□ -1.14
SMAD1-213ENST00000514778 KCNG1Q9UIX4 513 aa7.92□□□□□ -1.14
SMAD1-213ENST00000514778 TUBE1Q9UJT0 475 aa7.92□□□□□ -1.14
SMAD1-213ENST00000514778 SQORQ9Y6N5 450 aa7.92□□□□□ -1.14
SMAD1-213ENST00000514778 DDX11L8A8MPP1 907 aa7.91□□□□□ -1.14
SMAD1-213ENST00000514778 ZBTB42B2RXF5 422 aa7.91□□□□□ -1.14
SMAD1-213ENST00000514778 TREHO43280 583 aa7.91□□□□□ -1.14
SMAD1-213ENST00000514778 MAFO75444 373 aaPredicted RBP7.91□□□□□ -1.14
SMAD1-213ENST00000514778 MED24O75448 989 aa7.91□□□□□ -1.14
SMAD1-213ENST00000514778 DGAT1O75907 488 aa7.91□□□□□ -1.14
SMAD1-213ENST00000514778 PFKMP08237 780 aa7.91□□□□□ -1.14
SMAD1-213ENST00000514778 KLRC1P26715 233 aa7.91□□□□□ -1.14
SMAD1-213ENST00000514778 MARK3P27448 753 aa7.91□□□□□ -1.14
SMAD1-213ENST00000514778 CCT6AP40227 531 aaKnown RBP7.91□□□□□ -1.14
SMAD1-213ENST00000514778 DNM2P50570 870 aa7.91□□□□□ -1.14
SMAD1-213ENST00000514778 CYP4A11Q02928 519 aa7.91□□□□□ -1.14
SMAD1-213ENST00000514778 DNM1Q05193 864 aaKnown RBP7.91□□□□□ -1.14
SMAD1-213ENST00000514778 TBC1D8BQ0IIM8 1120 aa7.91□□□□□ -1.14
SMAD1-213ENST00000514778 CTTNQ14247 550 aaKnown RBP7.91□□□□□ -1.14
SMAD1-213ENST00000514778 UGCGQ16739 394 aa7.91□□□□□ -1.14
SMAD1-213ENST00000514778 CSPP1Q1MSJ5 1256 aa7.91□□□□□ -1.14
SMAD1-213ENST00000514778 FAM26DQ5JW98 314 aa7.91□□□□□ -1.14
SMAD1-213ENST00000514778 IER5Q5VY09 327 aa7.91□□□□□ -1.14
SMAD1-213ENST00000514778 MFSD5Q6N075 450 aa7.91□□□□□ -1.14
SMAD1-213ENST00000514778 TMEM199Q8N511 208 aa7.91□□□□□ -1.14
SMAD1-213ENST00000514778 LINC01465Q8N7H1 131 aa7.91□□□□□ -1.14
SMAD1-213ENST00000514778 USP38Q8NB14 1042 aa7.91□□□□□ -1.14
SMAD1-213ENST00000514778 MCPH1Q8NEM0 835 aa7.91□□□□□ -1.14
SMAD1-213ENST00000514778 SNX29Q8TEQ0 813 aa7.91□□□□□ -1.14
SMAD1-213ENST00000514778 UIMC1Q96RL1 719 aa7.91□□□□□ -1.14
SMAD1-213ENST00000514778 CTAGE1Q96RT6 745 aa7.91□□□□□ -1.14
SMAD1-213ENST00000514778 CEP89Q96ST8 783 aa7.91□□□□□ -1.14
SMAD1-213ENST00000514778 MMTAG2Q9BU76 263 aaKnown RBP7.91□□□□□ -1.14
SMAD1-213ENST00000514778 NOC4LQ9BVI4 516 aaKnown RBP7.91□□□□□ -1.14
SMAD1-213ENST00000514778 TIPINQ9BVW5 301 aa7.91□□□□□ -1.14
SMAD1-213ENST00000514778 HIPK3Q9H422 1215 aa7.91□□□□□ -1.14
SMAD1-213ENST00000514778 DHX33Q9H6R0 707 aaKnown RBP7.91□□□□□ -1.14
SMAD1-213ENST00000514778 IL21Q9HBE4 155 aa7.91□□□□□ -1.14
SMAD1-213ENST00000514778 PDLIM7Q9NR12 457 aa7.91□□□□□ -1.14
SMAD1-213ENST00000514778 TRMT13Q9NUP7 481 aaKnown RBP7.91□□□□□ -1.14
SMAD1-213ENST00000514778 TFIP11Q9UBB9 837 aaKnown RBP7.91□□□□□ -1.14
SMAD1-213ENST00000514778 DNM3Q9UQ16 869 aa7.91□□□□□ -1.14
SMAD1-213ENST00000514778 ASAP2O43150 1006 aa7.9□□□□□ -1.14
SMAD1-213ENST00000514778 C22orf31O95567 290 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms