RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 ZNF618Q5T7W0 954 aa9.18□□□□□ -0.94
NEDD4-210ENST00000513957 HAUS3Q68CZ6 603 aa9.18□□□□□ -0.94
NEDD4-210ENST00000513957 TRAF7Q6Q0C0 670 aa9.18□□□□□ -0.94
NEDD4-210ENST00000513957 MTHFD1LQ6UB35 978 aa9.18□□□□□ -0.94
NEDD4-210ENST00000513957 OTUD6AQ7L8S5 288 aa9.18□□□□□ -0.94
NEDD4-210ENST00000513957 ERMNQ8TAM6 284 aa9.18□□□□□ -0.94
NEDD4-210ENST00000513957 PHOSPHO2Q8TCD6 241 aa9.18□□□□□ -0.94
NEDD4-210ENST00000513957 PBXIP1Q96AQ6 731 aa9.18□□□□□ -0.94
NEDD4-210ENST00000513957 SCLYQ96I15 445 aa9.18□□□□□ -0.94
NEDD4-210ENST00000513957 SLC9A7Q96T83 725 aa9.18□□□□□ -0.94
NEDD4-210ENST00000513957 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.18□□□□□ -0.94
NEDD4-210ENST00000513957 ZSWIM4Q9H7M6 989 aa9.18□□□□□ -0.94
NEDD4-210ENST00000513957 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.17□□□□□ -0.94
NEDD4-210ENST00000513957 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.17□□□□□ -0.94
NEDD4-210ENST00000513957 ZBTB42B2RXF5 422 aa9.17□□□□□ -0.94
NEDD4-210ENST00000513957 ZNF862O60290 1169 aa9.17□□□□□ -0.94
NEDD4-210ENST00000513957 DTNBO60941 627 aa9.17□□□□□ -0.94
NEDD4-210ENST00000513957 C22orf31O95567 290 aa9.17□□□□□ -0.94
NEDD4-210ENST00000513957 XRCC6P12956 609 aaKnown RBP eCLIP9.17□□□□□ -0.94
NEDD4-210ENST00000513957 ATP4AP20648 1035 aa9.17□□□□□ -0.94
NEDD4-210ENST00000513957 KLRC1P26715 233 aa9.17□□□□□ -0.94
NEDD4-210ENST00000513957 EPHB4P54760 987 aa9.17□□□□□ -0.94
NEDD4-210ENST00000513957 MRPS6P82932 125 aaKnown RBP9.17□□□□□ -0.94
NEDD4-210ENST00000513957 MGAT3Q09327 533 aa9.17□□□□□ -0.94
NEDD4-210ENST00000513957 TBC1D8BQ0IIM8 1120 aa9.17□□□□□ -0.94
NEDD4-210ENST00000513957 PDIA5Q14554 519 aa9.17□□□□□ -0.94
NEDD4-210ENST00000513957 TARBP2Q15633 366 aaKnown RBP9.17□□□□□ -0.94
NEDD4-210ENST00000513957 PLEKHG4Q58EX7 1191 aa9.17□□□□□ -0.94
NEDD4-210ENST00000513957 ARL6IP4Q66PJ3 421 aaKnown RBP9.17□□□□□ -0.94
NEDD4-210ENST00000513957 MCTP1Q6DN14 999 aa9.17□□□□□ -0.94
NEDD4-210ENST00000513957 NCAPH2Q6IBW4 605 aa9.17□□□□□ -0.94
NEDD4-210ENST00000513957 ZNF365Q70YC5 407 aa9.17□□□□□ -0.94
NEDD4-210ENST00000513957 WNT8BQ93098 351 aa9.17□□□□□ -0.94
NEDD4-210ENST00000513957 MAP7D2Q96T17 732 aa9.17□□□□□ -0.94
NEDD4-210ENST00000513957 LXNQ9BS40 222 aa9.17□□□□□ -0.94
NEDD4-210ENST00000513957 ZSCAN16Q9H4T2 348 aaPredicted RBP9.17□□□□□ -0.94
NEDD4-210ENST00000513957 TUFT1Q9NNX1 390 aa9.17□□□□□ -0.94
NEDD4-210ENST00000513957 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.17□□□□□ -0.94
NEDD4-210ENST00000513957 RALGAPA2Q2PPJ7 1873 aa9.17□□□□□ -0.94
NEDD4-210ENST00000513957 EML1O00423 815 aa9.16□□□□□ -0.94
NEDD4-210ENST00000513957 WNT7AO00755 349 aa9.16□□□□□ -0.94
NEDD4-210ENST00000513957 SLC26A4O43511 780 aa9.16□□□□□ -0.94
NEDD4-210ENST00000513957 NBNO60934 754 aa9.16□□□□□ -0.94
NEDD4-210ENST00000513957 HSP90AA1P07900 732 aaKnown RBP9.16□□□□□ -0.94
NEDD4-210ENST00000513957 YWHABP31946 246 aaKnown RBP9.16□□□□□ -0.94
NEDD4-210ENST00000513957 RFC5P40937 340 aa9.16□□□□□ -0.94
NEDD4-210ENST00000513957 TXKP42681 527 aa9.16□□□□□ -0.94
NEDD4-210ENST00000513957 DNM2P50570 870 aa9.16□□□□□ -0.94
NEDD4-210ENST00000513957 TOB1P50616 345 aaPredicted RBP9.16□□□□□ -0.94
NEDD4-210ENST00000513957 FXR1P51114 621 aaKnown RBP eCLIP9.16□□□□□ -0.94
NEDD4-210ENST00000513957 IGBP1P78318 339 aa9.16□□□□□ -0.94
NEDD4-210ENST00000513957 ATP2C1P98194 919 aaPredicted RBP9.16□□□□□ -0.94
NEDD4-210ENST00000513957 IKBKEQ14164 716 aa9.16□□□□□ -0.94
NEDD4-210ENST00000513957 UGCGQ16739 394 aa9.16□□□□□ -0.94
NEDD4-210ENST00000513957 C9orf50Q5SZB4 431 aa9.16□□□□□ -0.94
NEDD4-210ENST00000513957 FAM109BQ6ICB4 259 aaPredicted RBP9.16□□□□□ -0.94
NEDD4-210ENST00000513957 RUFY4Q6ZNE9 571 aa9.16□□□□□ -0.94
NEDD4-210ENST00000513957 TSHZ1Q6ZSZ6 1077 aa9.16□□□□□ -0.94
NEDD4-210ENST00000513957 C16orf59Q7L2K0 433 aa9.16□□□□□ -0.94
NEDD4-210ENST00000513957 DEFB128Q7Z7B8 93 aa9.16□□□□□ -0.94
NEDD4-210ENST00000513957 LINC01465Q8N7H1 131 aa9.16□□□□□ -0.94
NEDD4-210ENST00000513957 IGSF22Q8N9C0 903 aa9.16□□□□□ -0.94
NEDD4-210ENST00000513957 PPP1R13LQ8WUF5 828 aa9.16□□□□□ -0.94
NEDD4-210ENST00000513957 DNAJB3Q8WWF6 145 aa9.16□□□□□ -0.94
NEDD4-210ENST00000513957 SLC7A3Q8WY07 619 aa9.16□□□□□ -0.94
NEDD4-210ENST00000513957 SEPT8Q92599 483 aa9.16□□□□□ -0.94
NEDD4-210ENST00000513957 GJA10Q969M2 543 aa9.16□□□□□ -0.94
NEDD4-210ENST00000513957 HSD17B14Q9BPX1 270 aa9.16□□□□□ -0.94
NEDD4-210ENST00000513957 EIF2AK1Q9BQI3 630 aaKnown RBP9.16□□□□□ -0.94
NEDD4-210ENST00000513957 POLR3CQ9BUI4 534 aaPredicted RBP9.16□□□□□ -0.94
NEDD4-210ENST00000513957 FTHL17Q9BXU8 183 aa9.16□□□□□ -0.94
NEDD4-210ENST00000513957 FTOQ9C0B1 505 aaKnown RBP eCLIP9.16□□□□□ -0.94
NEDD4-210ENST00000513957 ANKEF1Q9NU02 776 aa9.16□□□□□ -0.94
NEDD4-210ENST00000513957 SEPT9Q9UHD8 586 aaPredicted RBP9.16□□□□□ -0.94
NEDD4-210ENST00000513957 TRPV2Q9Y5S1 764 aa9.16□□□□□ -0.94
NEDD4-210ENST00000513957 SLC4A7Q9Y6M7 1214 aa9.16□□□□□ -0.94
NEDD4-210ENST00000513957 MORC2Q9Y6X9 1032 aaPredicted RBP9.16□□□□□ -0.94
NEDD4-210ENST00000513957 TTC3P53804 2025 aa9.15□□□□□ -0.94
NEDD4-210ENST00000513957 MYH11P35749 1972 aa9.15□□□□□ -0.94
NEDD4-210ENST00000513957 IGKV6-21A0A0C4DH24 114 aa9.15□□□□□ -0.94
NEDD4-210ENST00000513957 STX6O43752 255 aa9.15□□□□□ -0.94
NEDD4-210ENST00000513957 ACRP10323 421 aa9.15□□□□□ -0.94
NEDD4-210ENST00000513957 ATP2B1P20020 1258 aa9.15□□□□□ -0.94
NEDD4-210ENST00000513957 SYT1P21579 422 aa9.15□□□□□ -0.94
NEDD4-210ENST00000513957 RPA1P27694 616 aa9.15□□□□□ -0.94
NEDD4-210ENST00000513957 KCNJ6P48051 423 aa9.15□□□□□ -0.94
NEDD4-210ENST00000513957 MBTPS1Q14703 1052 aa9.15□□□□□ -0.94
NEDD4-210ENST00000513957 GPNMBQ14956 572 aa9.15□□□□□ -0.94
NEDD4-210ENST00000513957 ZNF174Q15697 407 aa9.15□□□□□ -0.94
NEDD4-210ENST00000513957 RAB30Q15771 203 aa9.15□□□□□ -0.94
NEDD4-210ENST00000513957 FBXO47Q5MNV8 452 aa9.15□□□□□ -0.94
NEDD4-210ENST00000513957 DTHD1Q6ZMT9 781 aa9.15□□□□□ -0.94
NEDD4-210ENST00000513957 ANO5Q75V66 913 aa9.15□□□□□ -0.94
NEDD4-210ENST00000513957 OTOP2Q7RTS6 562 aa9.15□□□□□ -0.94
NEDD4-210ENST00000513957 KIAA0319LQ8IZA0 1049 aa9.15□□□□□ -0.94
NEDD4-210ENST00000513957 C4orf32Q8N8J7 132 aa9.15□□□□□ -0.94
NEDD4-210ENST00000513957 VWCEQ96DN2 955 aa9.15□□□□□ -0.94
NEDD4-210ENST00000513957 AK8Q96MA6 479 aa9.15□□□□□ -0.94
NEDD4-210ENST00000513957 UIMC1Q96RL1 719 aa9.15□□□□□ -0.94
NEDD4-210ENST00000513957 IFIH1Q9BYX4 1025 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms