RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 PCDHA7Q9UN72 937 aa10.95□□□□□ -0.66
TOPBP1-209ENST00000513818 EVPLQ92817 2033 aa10.94□□□□□ -0.66
TOPBP1-209ENST00000513818 KDM3AQ9Y4C1 1321 aa10.94□□□□□ -0.66
TOPBP1-209ENST00000513818 USO1O60763 962 aaKnown RBP10.94□□□□□ -0.66
TOPBP1-209ENST00000513818 DKC1O60832 514 aaKnown RBP eCLIP10.94□□□□□ -0.66
TOPBP1-209ENST00000513818 VTNP04004 478 aa10.94□□□□□ -0.66
TOPBP1-209ENST00000513818 PLCG1P19174 1290 aa10.94□□□□□ -0.66
TOPBP1-209ENST00000513818 THPOP40225 353 aa10.94□□□□□ -0.66
TOPBP1-209ENST00000513818 RARRES1P49788 294 aa10.94□□□□□ -0.66
TOPBP1-209ENST00000513818 TBC1D8BQ0IIM8 1120 aa10.94□□□□□ -0.66
TOPBP1-209ENST00000513818 TARBP2Q15633 366 aaKnown RBP10.94□□□□□ -0.66
TOPBP1-209ENST00000513818 TMEM119Q4V9L6 283 aa10.94□□□□□ -0.66
TOPBP1-209ENST00000513818 AXDND1Q5T1B0 1012 aaPredicted RBP10.94□□□□□ -0.66
TOPBP1-209ENST00000513818 MAEAQ7L5Y9 396 aa10.94□□□□□ -0.66
TOPBP1-209ENST00000513818 METTL13Q8N6R0 699 aa10.94□□□□□ -0.66
TOPBP1-209ENST00000513818 KCNG4Q8TDN1 519 aa10.94□□□□□ -0.66
TOPBP1-209ENST00000513818 SCLYQ96I15 445 aa10.94□□□□□ -0.66
TOPBP1-209ENST00000513818 TOX2Q96NM4 488 aa10.94□□□□□ -0.66
TOPBP1-209ENST00000513818 CEP89Q96ST8 783 aa10.94□□□□□ -0.66
TOPBP1-209ENST00000513818 NIFKQ9BYG3 293 aaKnown RBP10.94□□□□□ -0.66
TOPBP1-209ENST00000513818 PANK2Q9BZ23 570 aa10.94□□□□□ -0.66
TOPBP1-209ENST00000513818 OSBPL7Q9BZF2 842 aa10.94□□□□□ -0.66
TOPBP1-209ENST00000513818 BHMT2Q9H2M3 363 aa10.94□□□□□ -0.66
TOPBP1-209ENST00000513818 POLD4Q9HCU8 107 aa10.94□□□□□ -0.66
TOPBP1-209ENST00000513818 RCOR1Q9UKL0 485 aa10.94□□□□□ -0.66
TOPBP1-209ENST00000513818 ATP6V1DQ9Y5K8 247 aa10.94□□□□□ -0.66
TOPBP1-209ENST00000513818 MBLAC1A4D2B0 266 aaPredicted RBP10.93□□□□□ -0.66
TOPBP1-209ENST00000513818 ARHGEF35A5YM69 484 aa10.93□□□□□ -0.66
TOPBP1-209ENST00000513818 RRN3P2A6NIE6 340 aa10.93□□□□□ -0.66
TOPBP1-209ENST00000513818 H0YGN5 161 aa10.93□□□□□ -0.66
TOPBP1-209ENST00000513818 KIAA0355O15063 1070 aa10.93□□□□□ -0.66
TOPBP1-209ENST00000513818 CUTAO60888 179 aa10.93□□□□□ -0.66
TOPBP1-209ENST00000513818 LYPLA2O95372 231 aa10.93□□□□□ -0.66
TOPBP1-209ENST00000513818 SSBP05455 408 aaKnown RBP eCLIP10.93□□□□□ -0.66
TOPBP1-209ENST00000513818 GNAT1P11488 350 aa10.93□□□□□ -0.66
TOPBP1-209ENST00000513818 CKBP12277 381 aa10.93□□□□□ -0.66
TOPBP1-209ENST00000513818 POLGP54098 1239 aaPredicted RBP10.93□□□□□ -0.66
TOPBP1-209ENST00000513818 MDM2Q00987 491 aaPredicted RBP10.93□□□□□ -0.66
TOPBP1-209ENST00000513818 PTK7Q13308 1070 aa10.93□□□□□ -0.66
TOPBP1-209ENST00000513818 DHX8Q14562 1220 aaKnown RBP10.93□□□□□ -0.66
TOPBP1-209ENST00000513818 EMC2Q15006 297 aa10.93□□□□□ -0.66
TOPBP1-209ENST00000513818 ZNF618Q5T7W0 954 aa10.93□□□□□ -0.66
TOPBP1-209ENST00000513818 ATL3Q6DD88 541 aa10.93□□□□□ -0.66
TOPBP1-209ENST00000513818 PDILTQ8N807 584 aa10.93□□□□□ -0.66
TOPBP1-209ENST00000513818 BADQ92934 168 aa10.93□□□□□ -0.66
TOPBP1-209ENST00000513818 TMEM143Q96AN5 459 aa10.93□□□□□ -0.66
TOPBP1-209ENST00000513818 AK8Q96MA6 479 aa10.93□□□□□ -0.66
TOPBP1-209ENST00000513818 SUGCTQ9HAC7 445 aa10.93□□□□□ -0.66
TOPBP1-209ENST00000513818 GPRC5CQ9NQ84 441 aa10.93□□□□□ -0.66
TOPBP1-209ENST00000513818 XPNPEP1Q9NQW7 623 aa10.93□□□□□ -0.66
TOPBP1-209ENST00000513818 GINS2Q9Y248 185 aa10.93□□□□□ -0.66
TOPBP1-209ENST00000513818 MORC2Q9Y6X9 1032 aaPredicted RBP10.93□□□□□ -0.66
TOPBP1-209ENST00000513818 LOXHD1Q8IVV2 1947 aa10.93□□□□□ -0.66
TOPBP1-209ENST00000513818 RAG1P15918 1043 aa10.92□□□□□ -0.66
TOPBP1-209ENST00000513818 TXLNAP40222 546 aa10.92□□□□□ -0.66
TOPBP1-209ENST00000513818 RAD51AP2Q09MP3 1159 aa10.92□□□□□ -0.66
TOPBP1-209ENST00000513818 HYIQ5T013 277 aa10.92□□□□□ -0.66
TOPBP1-209ENST00000513818 EFCAB12Q6NXP0 572 aa10.92□□□□□ -0.66
TOPBP1-209ENST00000513818 TRAF7Q6Q0C0 670 aa10.92□□□□□ -0.66
TOPBP1-209ENST00000513818 LRRC8DQ7L1W4 858 aa10.92□□□□□ -0.66
TOPBP1-209ENST00000513818 OTUD6AQ7L8S5 288 aa10.92□□□□□ -0.66
TOPBP1-209ENST00000513818 KSR1Q8IVT5 923 aa10.92□□□□□ -0.66
TOPBP1-209ENST00000513818 LINC01465Q8N7H1 131 aa10.92□□□□□ -0.66
TOPBP1-209ENST00000513818 CALML4Q96GE6 196 aa10.92□□□□□ -0.66
TOPBP1-209ENST00000513818 NACC1Q96RE7 527 aa10.92□□□□□ -0.66
TOPBP1-209ENST00000513818 RUSC1Q9BVN2 902 aa10.92□□□□□ -0.66
TOPBP1-209ENST00000513818 SEZ6LQ9BYH1 1024 aa10.92□□□□□ -0.66
TOPBP1-209ENST00000513818 CCSER1Q9C0I3 900 aa10.92□□□□□ -0.66
TOPBP1-209ENST00000513818 ANKEF1Q9NU02 776 aa10.92□□□□□ -0.66
TOPBP1-209ENST00000513818 BLOC1S4Q9NUP1 217 aa10.92□□□□□ -0.66
TOPBP1-209ENST00000513818 PRKAG2Q9UGJ0 569 aa10.92□□□□□ -0.66
TOPBP1-209ENST00000513818 AKT3Q9Y243 479 aa10.92□□□□□ -0.66
TOPBP1-209ENST00000513818 PCDHA2Q9Y5H9 948 aa10.92□□□□□ -0.66
TOPBP1-209ENST00000513818 NPHP3-ACAD11A0A0J9YXS1 232 aa10.91□□□□□ -0.66
TOPBP1-209ENST00000513818 MAFO75444 373 aaPredicted RBP10.91□□□□□ -0.66
TOPBP1-209ENST00000513818 EYA4O95677 639 aa10.91□□□□□ -0.66
TOPBP1-209ENST00000513818 PLA2G4BP0C869 781 aa10.91□□□□□ -0.66
TOPBP1-209ENST00000513818 ACRP10323 421 aa10.91□□□□□ -0.66
TOPBP1-209ENST00000513818 EPHB4P54760 987 aa10.91□□□□□ -0.66
TOPBP1-209ENST00000513818 MRPS6P82932 125 aaKnown RBP10.91□□□□□ -0.66
TOPBP1-209ENST00000513818 BFSP2Q13515 415 aa10.91□□□□□ -0.66
TOPBP1-209ENST00000513818 MCM6Q14566 821 aa10.91□□□□□ -0.66
TOPBP1-209ENST00000513818 MBTPS1Q14703 1052 aa10.91□□□□□ -0.66
TOPBP1-209ENST00000513818 NAALADL2Q58DX5 795 aa10.91□□□□□ -0.66
TOPBP1-209ENST00000513818 RESP18Q5W5W9 173 aa10.91□□□□□ -0.66
TOPBP1-209ENST00000513818 TAF2Q6P1X5 1199 aa10.91□□□□□ -0.66
TOPBP1-209ENST00000513818 PADI6Q6TGC4 694 aa10.91□□□□□ -0.66
TOPBP1-209ENST00000513818 DEFB128Q7Z7B8 93 aa10.91□□□□□ -0.66
TOPBP1-209ENST00000513818 KIAA0319LQ8IZA0 1049 aa10.91□□□□□ -0.66
TOPBP1-209ENST00000513818 FSIP1Q8NA03 581 aa10.91□□□□□ -0.66
TOPBP1-209ENST00000513818 SLC7A3Q8WY07 619 aa10.91□□□□□ -0.66
TOPBP1-209ENST00000513818 DHX58Q96C10 678 aa10.91□□□□□ -0.66
TOPBP1-209ENST00000513818 MTRQ99707 1265 aa10.91□□□□□ -0.66
TOPBP1-209ENST00000513818 SCAND2PQ9GZW5 306 aaPredicted RBP10.91□□□□□ -0.66
TOPBP1-209ENST00000513818 GOLPH3LQ9H4A5 285 aa10.91□□□□□ -0.66
TOPBP1-209ENST00000513818 DHX33Q9H6R0 707 aaKnown RBP10.91□□□□□ -0.66
TOPBP1-209ENST00000513818 CDHR5Q9HBB8 845 aa10.91□□□□□ -0.66
TOPBP1-209ENST00000513818 ATP6V0A4Q9HBG4 840 aa10.91□□□□□ -0.66
TOPBP1-209ENST00000513818 DBR1Q9UK59 544 aaKnown RBP10.91□□□□□ -0.66
TOPBP1-209ENST00000513818 DNM3Q9UQ16 869 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms