RNA–Protein interactions for RNA: ENST00000513756.5

PTPN20-229, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 640 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-229	ENST00000513756	CASD1	Q96PB1	797 aa		13.79	□□□□□ -0.2
PTPN20-229	ENST00000513756	HINFP	Q9BQA5	517 aa		13.79	□□□□□ -0.2
PTPN20-229	ENST00000513756	SDF4	Q9BRK5	362 aa		13.79	□□□□□ -0.2
PTPN20-229	ENST00000513756	JADE2	Q9NQC1	790 aa		13.79	□□□□□ -0.2
PTPN20-229	ENST00000513756	SEC63	Q9UGP8	760 aa	Known RBP	13.79	□□□□□ -0.2
PTPN20-229	ENST00000513756	STK25	O00506	426 aa		13.78	□□□□□ -0.2
PTPN20-229	ENST00000513756	IFIT3	O14879	490 aa	Known RBP	13.78	□□□□□ -0.2
PTPN20-229	ENST00000513756	CXCL14	O95715	111 aa		13.78	□□□□□ -0.2
PTPN20-229	ENST00000513756	WEE2	P0C1S8	567 aa		13.78	□□□□□ -0.2
PTPN20-229	ENST00000513756	CRYBB1	P53674	252 aa	Predicted RBP	13.78	□□□□□ -0.2
PTPN20-229	ENST00000513756	TROAP	Q12815	778 aa		13.78	□□□□□ -0.2
PTPN20-229	ENST00000513756	GIT2	Q14161	759 aa		13.78	□□□□□ -0.2
PTPN20-229	ENST00000513756	WTAP	Q15007	396 aa		13.78	□□□□□ -0.2
PTPN20-229	ENST00000513756	ZC3H14	Q6PJT7	736 aa	Known RBP	13.78	□□□□□ -0.2
PTPN20-229	ENST00000513756	LRRC55	Q6ZSA7	311 aa		13.78	□□□□□ -0.2
PTPN20-229	ENST00000513756	OTOP3	Q7RTS5	596 aa		13.78	□□□□□ -0.2
PTPN20-229	ENST00000513756	PSTPIP2	Q9H939	334 aa		13.78	□□□□□ -0.2
PTPN20-229	ENST00000513756	CDHR5	Q9HBB8	845 aa		13.78	□□□□□ -0.2
PTPN20-229	ENST00000513756	DUSP12	Q9UNI6	340 aa		13.78	□□□□□ -0.2
PTPN20-229	ENST00000513756	EPG5	Q9HCE0	2579 aa		13.78	□□□□□ -0.2
PTPN20-229	ENST00000513756	SPDYE3	A6NKU9	549 aa		13.77	□□□□□ -0.21
PTPN20-229	ENST00000513756	HBP1	O60381	514 aa		13.77	□□□□□ -0.21
PTPN20-229	ENST00000513756	RFX1	P22670	979 aa		13.77	□□□□□ -0.21
PTPN20-229	ENST00000513756	ACTR2	P61160	394 aa		13.77	□□□□□ -0.21
PTPN20-229	ENST00000513756	KIAA0319L	Q8IZA0	1049 aa		13.77	□□□□□ -0.21
PTPN20-229	ENST00000513756	SIX5	Q8N196	739 aa		13.77	□□□□□ -0.21
PTPN20-229	ENST00000513756	SLC39A11	Q8N1S5	342 aa		13.77	□□□□□ -0.21
PTPN20-229	ENST00000513756	C12orf76	Q8N812	135 aa	Predicted RBP	13.77	□□□□□ -0.21
PTPN20-229	ENST00000513756	CYP2W1	Q8TAV3	490 aa		13.77	□□□□□ -0.21
PTPN20-229	ENST00000513756	TMEM40	Q8WWA1	233 aa		13.77	□□□□□ -0.21
PTPN20-229	ENST00000513756	SPZ1	Q9BXG8	430 aa		13.77	□□□□□ -0.21
PTPN20-229	ENST00000513756	NCOR2	Q9Y618	2525 aa		13.77	□□□□□ -0.21
PTPN20-229	ENST00000513756	COL1A2	P08123	1366 aa		13.76	□□□□□ -0.21
PTPN20-229	ENST00000513756	NFASC	O94856	1347 aa		13.76	□□□□□ -0.21
PTPN20-229	ENST00000513756	CARNS1	A5YM72	827 aa		13.76	□□□□□ -0.21
PTPN20-229	ENST00000513756	ZSCAN20	P17040	1043 aa	Predicted RBP	13.76	□□□□□ -0.21
PTPN20-229	ENST00000513756	SMARCA1	P28370	1054 aa		13.76	□□□□□ -0.21
PTPN20-229	ENST00000513756	PBX3	P40426	434 aa		13.76	□□□□□ -0.21
PTPN20-229	ENST00000513756	ALDH7A1	P49419	539 aa	Known RBP	13.76	□□□□□ -0.21
PTPN20-229	ENST00000513756	DSC3	Q14574	896 aa		13.76	□□□□□ -0.21
PTPN20-229	ENST00000513756	ZNF484	Q5JVG2	852 aa		13.76	□□□□□ -0.21
PTPN20-229	ENST00000513756	FAM160B1	Q5W0V3	765 aa		13.76	□□□□□ -0.21
PTPN20-229	ENST00000513756	CCDC149	Q6ZUS6	474 aa		13.76	□□□□□ -0.21
PTPN20-229	ENST00000513756	CABP7	Q86V35	215 aa		13.76	□□□□□ -0.21
PTPN20-229	ENST00000513756	FAM228A	Q86W67	206 aa		13.76	□□□□□ -0.21
PTPN20-229	ENST00000513756	TMEM169	Q96HH4	297 aa		13.76	□□□□□ -0.21
PTPN20-229	ENST00000513756	MAP3K14	Q99558	947 aa		13.76	□□□□□ -0.21
PTPN20-229	ENST00000513756	LZTS2	Q9BRK4	669 aa		13.76	□□□□□ -0.21
PTPN20-229	ENST00000513756	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	13.75	□□□□□ -0.21
PTPN20-229	ENST00000513756	SPDYE4	A6NLX3	237 aa		13.75	□□□□□ -0.21
PTPN20-229	ENST00000513756	KRT37	O76014	449 aa		13.75	□□□□□ -0.21
PTPN20-229	ENST00000513756	KIF5B	P33176	963 aa		13.75	□□□□□ -0.21
PTPN20-229	ENST00000513756	NONO	Q15233	471 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
PTPN20-229	ENST00000513756	KIZ	Q2M2Z5	673 aa		13.75	□□□□□ -0.21
PTPN20-229	ENST00000513756	PPFIBP1	Q86W92	1011 aa		13.75	□□□□□ -0.21
PTPN20-229	ENST00000513756	CTCFL	Q8NI51	663 aa	Predicted RBP	13.75	□□□□□ -0.21
PTPN20-229	ENST00000513756	RUBCN	Q92622	972 aa		13.75	□□□□□ -0.21
PTPN20-229	ENST00000513756	CNTNAP3B	Q96NU0	1288 aa		13.75	□□□□□ -0.21
PTPN20-229	ENST00000513756	OSMR	Q99650	979 aa		13.75	□□□□□ -0.21
PTPN20-229	ENST00000513756	MXRA8	Q9BRK3	442 aa		13.75	□□□□□ -0.21
PTPN20-229	ENST00000513756	MRPL9	Q9BYD2	267 aa	Known RBP	13.75	□□□□□ -0.21
PTPN20-229	ENST00000513756	CNTNAP3	Q9BZ76	1288 aa		13.75	□□□□□ -0.21
PTPN20-229	ENST00000513756	KCNK12	Q9HB15	430 aa		13.75	□□□□□ -0.21
PTPN20-229	ENST00000513756	KCNH7	Q9NS40	1196 aa		13.75	□□□□□ -0.21
PTPN20-229	ENST00000513756	RNF19A	Q9NV58	838 aa		13.75	□□□□□ -0.21
PTPN20-229	ENST00000513756	DLL3	Q9NYJ7	618 aa		13.75	□□□□□ -0.21
PTPN20-229	ENST00000513756	IGSF9	Q9P2J2	1179 aa		13.75	□□□□□ -0.21
PTPN20-229	ENST00000513756	WNT16	Q9UBV4	365 aa		13.75	□□□□□ -0.21
PTPN20-229	ENST00000513756		R4GN57	208 aa		13.75	□□□□□ -0.21
PTPN20-229	ENST00000513756	KMT2B	Q9UMN6	2715 aa	Predicted RBP	13.75	□□□□□ -0.21
PTPN20-229	ENST00000513756	BACH1	O14867	736 aa		13.74	□□□□□ -0.21
PTPN20-229	ENST00000513756	ATG7	O95352	703 aa		13.74	□□□□□ -0.21
PTPN20-229	ENST00000513756	SDHB	P21912	280 aa		13.74	□□□□□ -0.21
PTPN20-229	ENST00000513756	GNAQ	P50148	359 aa		13.74	□□□□□ -0.21
PTPN20-229	ENST00000513756	POLG	P54098	1239 aa	Predicted RBP	13.74	□□□□□ -0.21
PTPN20-229	ENST00000513756	TMC5	Q6UXY8	1006 aa		13.74	□□□□□ -0.21
PTPN20-229	ENST00000513756	RALYL	Q86SE5	291 aa	Known RBP	13.74	□□□□□ -0.21
PTPN20-229	ENST00000513756	ECHDC2	Q86YB7	292 aa		13.74	□□□□□ -0.21
PTPN20-229	ENST00000513756	VPS52	Q8N1B4	723 aa		13.74	□□□□□ -0.21
PTPN20-229	ENST00000513756	ZNF710	Q8N1W2	664 aa		13.74	□□□□□ -0.21
PTPN20-229	ENST00000513756	LNPK	Q9C0E8	428 aa		13.74	□□□□□ -0.21
PTPN20-229	ENST00000513756	SFXN1	Q9H9B4	322 aa		13.74	□□□□□ -0.21
PTPN20-229	ENST00000513756	SENP2	Q9HC62	589 aa		13.74	□□□□□ -0.21
PTPN20-229	ENST00000513756	PCDHA6	Q9UN73	950 aa		13.74	□□□□□ -0.21
PTPN20-229	ENST00000513756	PCDHA8	Q9Y5H6	950 aa		13.74	□□□□□ -0.21
PTPN20-229	ENST00000513756	IRAK3	Q9Y616	596 aa		13.74	□□□□□ -0.21
PTPN20-229	ENST00000513756		U3KPZ7	1027 aa	Predicted RBP	13.74	□□□□□ -0.21
PTPN20-229	ENST00000513756	TPR	P12270	2363 aa	Known RBP	13.73	□□□□□ -0.21
PTPN20-229	ENST00000513756	IGKV6D-21	A0A0A0MT36	114 aa		13.73	□□□□□ -0.21
PTPN20-229	ENST00000513756	GPR32	O75388	356 aa		13.73	□□□□□ -0.21
PTPN20-229	ENST00000513756	EPCAM	P16422	314 aa		13.73	□□□□□ -0.21
PTPN20-229	ENST00000513756	METAP2	P50579	478 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
PTPN20-229	ENST00000513756	BCAR1	P56945	870 aa		13.73	□□□□□ -0.21
PTPN20-229	ENST00000513756	TBC1D8B	Q0IIM8	1120 aa		13.73	□□□□□ -0.21
PTPN20-229	ENST00000513756	HDAC1	Q13547	482 aa	Predicted RBP	13.73	□□□□□ -0.21
PTPN20-229	ENST00000513756	UBE2S	Q16763	222 aa		13.73	□□□□□ -0.21
PTPN20-229	ENST00000513756	KANK3	Q6NY19	840 aa		13.73	□□□□□ -0.21
PTPN20-229	ENST00000513756	GPR149	Q86SP6	731 aa		13.73	□□□□□ -0.21
PTPN20-229	ENST00000513756	RNF169	Q8NCN4	708 aa		13.73	□□□□□ -0.21
PTPN20-229	ENST00000513756	SLC22A17	Q8WUG5	538 aa		13.73	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms