RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 CHD1LQ86WJ1 897 aa15.9■□□□□ 0.14
SPCS3-204ENST00000513139 NCOA7Q8NI08 942 aa15.9■□□□□ 0.14
SPCS3-204ENST00000513139 CTCFLQ8NI51 663 aaPredicted RBP15.9■□□□□ 0.14
SPCS3-204ENST00000513139 IGDCC4Q8TDY8 1250 aa15.9■□□□□ 0.14
SPCS3-204ENST00000513139 APOL5Q9BWW9 433 aa15.9■□□□□ 0.14
SPCS3-204ENST00000513139 TMEM117Q9H0C3 514 aa15.9■□□□□ 0.14
SPCS3-204ENST00000513139 POMKQ9H5K3 350 aa15.9■□□□□ 0.14
SPCS3-204ENST00000513139 KCNH7Q9NS40 1196 aa15.9■□□□□ 0.14
SPCS3-204ENST00000513139 HCSTQ9UBK5 93 aa15.9■□□□□ 0.14
SPCS3-204ENST00000513139 COL1A2P08123 1366 aa15.89■□□□□ 0.13
SPCS3-204ENST00000513139 HOXA2O43364 376 aa15.89■□□□□ 0.13
SPCS3-204ENST00000513139 DDAH1O94760 285 aa15.89■□□□□ 0.13
SPCS3-204ENST00000513139 ATG7O95352 703 aa15.89■□□□□ 0.13
SPCS3-204ENST00000513139 CYP21A2P08686 494 aa15.89■□□□□ 0.13
SPCS3-204ENST00000513139 IBSPP21815 317 aaPredicted RBP15.89■□□□□ 0.13
SPCS3-204ENST00000513139 KLRC1P26715 233 aa15.89■□□□□ 0.13
SPCS3-204ENST00000513139 GNAQP50148 359 aa15.89■□□□□ 0.13
SPCS3-204ENST00000513139 KCNT2Q6UVM3 1135 aa15.89■□□□□ 0.13
SPCS3-204ENST00000513139 FRMD5Q7Z6J6 570 aa15.89■□□□□ 0.13
SPCS3-204ENST00000513139 KIAA0319LQ8IZA0 1049 aa15.89■□□□□ 0.13
SPCS3-204ENST00000513139 ZDHHC14Q8IZN3 488 aa15.89■□□□□ 0.13
SPCS3-204ENST00000513139 TMEM40Q8WWA1 233 aa15.89■□□□□ 0.13
SPCS3-204ENST00000513139 SDF4Q9BRK5 362 aa15.89■□□□□ 0.13
SPCS3-204ENST00000513139 CDHR5Q9HBB8 845 aa15.89■□□□□ 0.13
SPCS3-204ENST00000513139 GINS2Q9Y248 185 aa15.89■□□□□ 0.13
SPCS3-204ENST00000513139 IGKV6D-21A0A0A0MT36 114 aa15.88■□□□□ 0.13
SPCS3-204ENST00000513139 HBP1O60381 514 aa15.88■□□□□ 0.13
SPCS3-204ENST00000513139 FGFR1P11362 822 aa15.88■□□□□ 0.13
SPCS3-204ENST00000513139 NUCB1Q02818 461 aa15.88■□□□□ 0.13
SPCS3-204ENST00000513139 B4GALNT3Q6L9W6 998 aa15.88■□□□□ 0.13
SPCS3-204ENST00000513139 TMC7Q7Z402 723 aa15.88■□□□□ 0.13
SPCS3-204ENST00000513139 TEX2Q8IWB9 1127 aa15.88■□□□□ 0.13
SPCS3-204ENST00000513139 ZNF654Q8IZM8 581 aa15.88■□□□□ 0.13
SPCS3-204ENST00000513139 ADSSL1Q8N142 457 aa15.88■□□□□ 0.13
SPCS3-204ENST00000513139 MRPL43Q8N983 215 aaKnown RBP15.88■□□□□ 0.13
SPCS3-204ENST00000513139 ZNF558Q96NG5 402 aa15.88■□□□□ 0.13
SPCS3-204ENST00000513139 MXRA8Q9BRK3 442 aa15.88■□□□□ 0.13
SPCS3-204ENST00000513139 IL25Q9H293 177 aa15.88■□□□□ 0.13
SPCS3-204ENST00000513139 MFSD1Q9H3U5 465 aa15.88■□□□□ 0.13
SPCS3-204ENST00000513139 SPG21Q9NZD8 308 aa15.88■□□□□ 0.13
SPCS3-204ENST00000513139 PCDHA6Q9UN73 950 aa15.88■□□□□ 0.13
SPCS3-204ENST00000513139 USTQ9Y2C2 406 aa15.88■□□□□ 0.13
SPCS3-204ENST00000513139 PCDHA8Q9Y5H6 950 aa15.88■□□□□ 0.13
SPCS3-204ENST00000513139 HCFC2Q9Y5Z7 792 aa15.88■□□□□ 0.13
SPCS3-204ENST00000513139 E7EWF7 191 aa15.87■□□□□ 0.13
SPCS3-204ENST00000513139 CRYBB1P53674 252 aaPredicted RBP15.87■□□□□ 0.13
SPCS3-204ENST00000513139 DSC3Q14574 896 aa15.87■□□□□ 0.13
SPCS3-204ENST00000513139 SMC1AQ14683 1233 aaKnown RBP15.87■□□□□ 0.13
SPCS3-204ENST00000513139 LRRC55Q6ZSA7 311 aa15.87■□□□□ 0.13
SPCS3-204ENST00000513139 LRRC43Q8N309 656 aa15.87■□□□□ 0.13
SPCS3-204ENST00000513139 CASD1Q96PB1 797 aa15.87■□□□□ 0.13
SPCS3-204ENST00000513139 CACNA1BQ00975 2339 aa15.86■□□□□ 0.13
SPCS3-204ENST00000513139 FANCMQ8IYD8 2048 aa15.86■□□□□ 0.13
SPCS3-204ENST00000513139 C2orf71A6NGG8 1288 aa15.86■□□□□ 0.13
SPCS3-204ENST00000513139 BMS1Q14692 1282 aaKnown RBP15.86■□□□□ 0.13
SPCS3-204ENST00000513139 UBE2SQ16763 222 aa15.86■□□□□ 0.13
SPCS3-204ENST00000513139 ZNF484Q5JVG2 852 aa15.86■□□□□ 0.13
SPCS3-204ENST00000513139 FAM228AQ86W67 206 aa15.86■□□□□ 0.13
SPCS3-204ENST00000513139 SRBD1Q8N5C6 995 aaKnown RBP15.86■□□□□ 0.13
SPCS3-204ENST00000513139 TDRD5Q8NAT2 981 aaKnown RBP15.86■□□□□ 0.13
SPCS3-204ENST00000513139 MTA3Q9BTC8 594 aa15.86■□□□□ 0.13
SPCS3-204ENST00000513139 LY9Q9HBG7 655 aa15.86■□□□□ 0.13
SPCS3-204ENST00000513139 CDH22Q9UJ99 828 aa15.86■□□□□ 0.13
SPCS3-204ENST00000513139 DNAH14Q0VDD8 3507 aa15.86■□□□□ 0.13
SPCS3-204ENST00000513139 C2orf16Q68DN1 1984 aa15.86■□□□□ 0.13
SPCS3-204ENST00000513139 ASGR2P07307 311 aa15.85■□□□□ 0.13
SPCS3-204ENST00000513139 ANTXR2P58335 489 aa15.85■□□□□ 0.13
SPCS3-204ENST00000513139 KIZQ2M2Z5 673 aa15.85■□□□□ 0.13
SPCS3-204ENST00000513139 ATAT1Q5SQI0 421 aa15.85■□□□□ 0.13
SPCS3-204ENST00000513139 FAM160B1Q5W0V3 765 aa15.85■□□□□ 0.13
SPCS3-204ENST00000513139 KIAA1841Q6NSI8 718 aa15.85■□□□□ 0.13
SPCS3-204ENST00000513139 ABI1Q8IZP0 508 aa15.85■□□□□ 0.13
SPCS3-204ENST00000513139 TMTC2Q8N394 836 aa15.85■□□□□ 0.13
SPCS3-204ENST00000513139 SMOC2Q9H3U7 446 aa15.85■□□□□ 0.13
SPCS3-204ENST00000513139 RNF19AQ9NV58 838 aa15.85■□□□□ 0.13
SPCS3-204ENST00000513139 DZANK1Q9NVP4 752 aa15.85■□□□□ 0.13
SPCS3-204ENST00000513139 LIMD1Q9UGP4 676 aa15.85■□□□□ 0.13
SPCS3-204ENST00000513139 CEP250Q9BV73 2442 aa15.85■□□□□ 0.13
SPCS3-204ENST00000513139 ZBTB42B2RXF5 422 aa15.84■□□□□ 0.13
SPCS3-204ENST00000513139 RIOK3O14730 519 aaKnown RBP15.84■□□□□ 0.13
SPCS3-204ENST00000513139 CLASP2O75122 1294 aaKnown RBP15.84■□□□□ 0.13
SPCS3-204ENST00000513139 PLEKHA8P1O95397 391 aa15.84■□□□□ 0.13
SPCS3-204ENST00000513139 AOC1P19801 751 aa15.84■□□□□ 0.13
SPCS3-204ENST00000513139 ITGB3BPQ13352 177 aaPredicted RBP15.84■□□□□ 0.13
SPCS3-204ENST00000513139 CEP55Q53EZ4 464 aa15.84■□□□□ 0.13
SPCS3-204ENST00000513139 ABHD15Q6UXT9 468 aa15.84■□□□□ 0.13
SPCS3-204ENST00000513139 MB21D2Q8IYB1 491 aaPredicted RBP15.84■□□□□ 0.13
SPCS3-204ENST00000513139 SLC39A11Q8N1S5 342 aa15.84■□□□□ 0.13
SPCS3-204ENST00000513139 ZNF710Q8N1W2 664 aa15.84■□□□□ 0.13
SPCS3-204ENST00000513139 CYP2W1Q8TAV3 490 aa15.84■□□□□ 0.13
SPCS3-204ENST00000513139 OSMRQ99650 979 aa15.84■□□□□ 0.13
SPCS3-204ENST00000513139 RTP3Q9BQQ7 232 aa15.84■□□□□ 0.13
SPCS3-204ENST00000513139 MYL10Q9BUA6 226 aa15.84■□□□□ 0.13
SPCS3-204ENST00000513139 SEMA4AQ9H3S1 761 aa15.84■□□□□ 0.13
SPCS3-204ENST00000513139 AGO4Q9HCK5 861 aaKnown RBP15.84■□□□□ 0.13
SPCS3-204ENST00000513139 OTOGLQ3ZCN5 2332 aa15.83■□□□□ 0.12
SPCS3-204ENST00000513139 MEIS1O00470 390 aa15.83■□□□□ 0.12
SPCS3-204ENST00000513139 BACH1O14867 736 aa15.83■□□□□ 0.12
SPCS3-204ENST00000513139 GPR32O75388 356 aa15.83■□□□□ 0.12
SPCS3-204ENST00000513139 EOMESO95936 686 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms