RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 ZNF286BP0CG31 522 aa8.28□□□□□ -1.08
USP46-208ENST00000512656 GNAT1P11488 350 aa8.28□□□□□ -1.08
USP46-208ENST00000512656 SKIP12755 728 aa8.28□□□□□ -1.08
USP46-208ENST00000512656 UBA1P22314 1058 aaKnown RBP8.28□□□□□ -1.08
USP46-208ENST00000512656 GNAQP50148 359 aa8.28□□□□□ -1.08
USP46-208ENST00000512656 WDR5P61964 334 aaKnown RBP8.28□□□□□ -1.08
USP46-208ENST00000512656 TAP1Q03518 808 aa8.28□□□□□ -1.08
USP46-208ENST00000512656 TROAPQ12815 778 aa8.28□□□□□ -1.08
USP46-208ENST00000512656 NEDD9Q14511 834 aa8.28□□□□□ -1.08
USP46-208ENST00000512656 XRRA1Q6P2D8 792 aa8.28□□□□□ -1.08
USP46-208ENST00000512656 CASC1Q6TDU7 716 aa8.28□□□□□ -1.08
USP46-208ENST00000512656 FCHSD1Q86WN1 690 aa8.28□□□□□ -1.08
USP46-208ENST00000512656 TMTC2Q8N394 836 aa8.28□□□□□ -1.08
USP46-208ENST00000512656 GALNT6Q8NCL4 622 aa8.28□□□□□ -1.08
USP46-208ENST00000512656 CTCFLQ8NI51 663 aaPredicted RBP8.28□□□□□ -1.08
USP46-208ENST00000512656 ARNTL2Q8WYA1 636 aa8.28□□□□□ -1.08
USP46-208ENST00000512656 DHX38Q92620 1227 aaKnown RBP8.28□□□□□ -1.08
USP46-208ENST00000512656 CUL5Q93034 780 aa8.28□□□□□ -1.08
USP46-208ENST00000512656 UHRF1Q96T88 793 aaPredicted RBP8.28□□□□□ -1.08
USP46-208ENST00000512656 MAP3K14Q99558 947 aa8.28□□□□□ -1.08
USP46-208ENST00000512656 RAD9AQ99638 391 aa8.28□□□□□ -1.08
USP46-208ENST00000512656 LZTS2Q9BRK4 669 aa8.28□□□□□ -1.08
USP46-208ENST00000512656 ZCCHC2Q9C0B9 1178 aaKnown RBP8.28□□□□□ -1.08
USP46-208ENST00000512656 SERTAD1Q9UHV2 236 aa8.28□□□□□ -1.08
USP46-208ENST00000512656 COG5Q9UP83 839 aa8.28□□□□□ -1.08
USP46-208ENST00000512656 MTCH2Q9Y6C9 303 aa8.28□□□□□ -1.08
USP46-208ENST00000512656 MUC3AQ02505 3323 aa8.28□□□□□ -1.08
USP46-208ENST00000512656 C17orf102A2RUQ5 167 aa8.27□□□□□ -1.09
USP46-208ENST00000512656 RSPH10B2B2RC85 870 aa8.27□□□□□ -1.09
USP46-208ENST00000512656 H3BRB1 525 aa8.27□□□□□ -1.09
USP46-208ENST00000512656 C2CD2LO14523 706 aa8.27□□□□□ -1.09
USP46-208ENST00000512656 NBNO60934 754 aa8.27□□□□□ -1.09
USP46-208ENST00000512656 CAND2O75155 1236 aa8.27□□□□□ -1.09
USP46-208ENST00000512656 DDAH1O94760 285 aa8.27□□□□□ -1.09
USP46-208ENST00000512656 GJB5O95377 273 aa8.27□□□□□ -1.09
USP46-208ENST00000512656 RSPH10BP0C881 870 aa8.27□□□□□ -1.09
USP46-208ENST00000512656 ARAFP10398 606 aa8.27□□□□□ -1.09
USP46-208ENST00000512656 PRKCSHP14314 528 aaPredicted RBP8.27□□□□□ -1.09
USP46-208ENST00000512656 SMARCA1P28370 1054 aa8.27□□□□□ -1.09
USP46-208ENST00000512656 ICAM3P32942 547 aa8.27□□□□□ -1.09
USP46-208ENST00000512656 PTH1RQ03431 593 aa8.27□□□□□ -1.09
USP46-208ENST00000512656 SUZ12Q15022 739 aaKnown RBP8.27□□□□□ -1.09
USP46-208ENST00000512656 HSDL1Q3SXM5 330 aa8.27□□□□□ -1.09
USP46-208ENST00000512656 SERINC5Q86VE9 423 aa8.27□□□□□ -1.09
USP46-208ENST00000512656 SMARCC2Q8TAQ2 1214 aa8.27□□□□□ -1.09
USP46-208ENST00000512656 EDARADDQ8WWZ3 215 aa8.27□□□□□ -1.09
USP46-208ENST00000512656 RRP36Q96EU6 259 aaKnown RBP8.27□□□□□ -1.09
USP46-208ENST00000512656 CTAGE1Q96RT6 745 aa8.27□□□□□ -1.09
USP46-208ENST00000512656 MTA3Q9BTC8 594 aa8.27□□□□□ -1.09
USP46-208ENST00000512656 SPZ1Q9BXG8 430 aa8.27□□□□□ -1.09
USP46-208ENST00000512656 USP26Q9BXU7 913 aa8.27□□□□□ -1.09
USP46-208ENST00000512656 IL25Q9H293 177 aa8.27□□□□□ -1.09
USP46-208ENST00000512656 TUT1Q9H6E5 874 aaKnown RBP8.27□□□□□ -1.09
USP46-208ENST00000512656 CERS4Q9HA82 394 aa8.27□□□□□ -1.09
USP46-208ENST00000512656 AVENQ9NQS1 362 aaPredicted RBP8.27□□□□□ -1.09
USP46-208ENST00000512656 LMCD1Q9NZU5 365 aa8.27□□□□□ -1.09
USP46-208ENST00000512656 SEC63Q9UGP8 760 aaKnown RBP8.27□□□□□ -1.09
USP46-208ENST00000512656 MKL2Q9ULH7 1088 aa8.27□□□□□ -1.09
USP46-208ENST00000512656 SUPT16HQ9Y5B9 1047 aaKnown RBP8.27□□□□□ -1.09
USP46-208ENST00000512656 MYH6P13533 1939 aa8.27□□□□□ -1.09
USP46-208ENST00000512656 KIAA1217Q5T5P2 1943 aa8.27□□□□□ -1.09
USP46-208ENST00000512656 TANC1Q9C0D5 1861 aa8.26□□□□□ -1.09
USP46-208ENST00000512656 SCN5AQ14524 2016 aa8.26□□□□□ -1.09
USP46-208ENST00000512656 SHISA8B8ZZ34 492 aa8.26□□□□□ -1.09
USP46-208ENST00000512656 RFXAPO00287 272 aa8.26□□□□□ -1.09
USP46-208ENST00000512656 PIK3R2O00459 728 aa8.26□□□□□ -1.09
USP46-208ENST00000512656 ATXN7O15265 892 aaPredicted RBP8.26□□□□□ -1.09
USP46-208ENST00000512656 FIBPO43427 364 aa8.26□□□□□ -1.09
USP46-208ENST00000512656 CYTH3O43739 400 aa8.26□□□□□ -1.09
USP46-208ENST00000512656 SORBS3O60504 671 aa8.26□□□□□ -1.09
USP46-208ENST00000512656 LGR5O75473 907 aa8.26□□□□□ -1.09
USP46-208ENST00000512656 AMHP03971 560 aa8.26□□□□□ -1.09
USP46-208ENST00000512656 THPOP40225 353 aa8.26□□□□□ -1.09
USP46-208ENST00000512656 CTBSQ01459 385 aa8.26□□□□□ -1.09
USP46-208ENST00000512656 SP2Q02086 613 aa8.26□□□□□ -1.09
USP46-208ENST00000512656 GPNMBQ14956 572 aa8.26□□□□□ -1.09
USP46-208ENST00000512656 SLC35G1Q2M3R5 365 aa8.26□□□□□ -1.09
USP46-208ENST00000512656 TRIM71Q2Q1W2 868 aaKnown RBP8.26□□□□□ -1.09
USP46-208ENST00000512656 ZNF618Q5T7W0 954 aa8.26□□□□□ -1.09
USP46-208ENST00000512656 SAMD5Q5TGI4 173 aa8.26□□□□□ -1.09
USP46-208ENST00000512656 METTL7BQ6UX53 244 aa8.26□□□□□ -1.09
USP46-208ENST00000512656 NFXL1Q6ZNB6 911 aa8.26□□□□□ -1.09
USP46-208ENST00000512656 NLRX1Q86UT6 975 aa8.26□□□□□ -1.09
USP46-208ENST00000512656 GIMAP8Q8ND71 665 aaPredicted RBP8.26□□□□□ -1.09
USP46-208ENST00000512656 IL31RAQ8NI17 732 aa8.26□□□□□ -1.09
USP46-208ENST00000512656 IGDCC4Q8TDY8 1250 aa8.26□□□□□ -1.09
USP46-208ENST00000512656 MAP4K1Q92918 833 aa8.26□□□□□ -1.09
USP46-208ENST00000512656 ATP6V0A1Q93050 837 aa8.26□□□□□ -1.09
USP46-208ENST00000512656 CDHR1Q96JP9 859 aa8.26□□□□□ -1.09
USP46-208ENST00000512656 INPP4AQ96PE3 977 aaPredicted RBP8.26□□□□□ -1.09
USP46-208ENST00000512656 TGS1Q96RS0 853 aaKnown RBP8.26□□□□□ -1.09
USP46-208ENST00000512656 SENP7Q9BQF6 1050 aa8.26□□□□□ -1.09
USP46-208ENST00000512656 C16orf70Q9BSU1 422 aa8.26□□□□□ -1.09
USP46-208ENST00000512656 ZNF215Q9UL58 517 aaPredicted RBP8.26□□□□□ -1.09
USP46-208ENST00000512656 RBM8AQ9Y5S9 174 aaKnown RBP8.26□□□□□ -1.09
USP46-208ENST00000512656 REV3LO60673 3130 aa8.26□□□□□ -1.09
USP46-208ENST00000512656 FRMPD4Q14CM0 1322 aa8.26□□□□□ -1.09
USP46-208ENST00000512656 TET1Q8NFU7 2136 aa8.26□□□□□ -1.09
USP46-208ENST00000512656 GBF1Q92538 1859 aa8.26□□□□□ -1.09
USP46-208ENST00000512656 XIRP2A4UGR9 3374 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms