RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 NHEJ1Q9H9Q4 299 aaPredicted RBP11.68□□□□□ -0.54
CPNE4-209ENST00000512055 TUBE1Q9UJT0 475 aa11.68□□□□□ -0.54
CPNE4-209ENST00000512055 UHMK1Q8TAS1 419 aaKnown RBP11.67□□□□□ -0.54
CPNE4-209ENST00000512055 TXLNGQ9NUQ3 528 aa11.67□□□□□ -0.54
CPNE4-209ENST00000512055 GINS2Q9Y248 185 aa11.67□□□□□ -0.54
CPNE4-209ENST00000512055 BAZ2BQ9UIF8 2168 aaKnown RBP11.67□□□□□ -0.54
CPNE4-209ENST00000512055 F5H6K3 240 aa11.67□□□□□ -0.54
CPNE4-209ENST00000512055 PRPF6O94906 941 aaKnown RBP11.67□□□□□ -0.54
CPNE4-209ENST00000512055 FCER1AP12319 257 aa11.67□□□□□ -0.54
CPNE4-209ENST00000512055 CXCR5P32302 372 aa11.67□□□□□ -0.54
CPNE4-209ENST00000512055 ZBED6P86452 979 aa11.67□□□□□ -0.54
CPNE4-209ENST00000512055 KLRC3Q07444 240 aa11.67□□□□□ -0.54
CPNE4-209ENST00000512055 NCBP1Q09161 790 aaKnown RBP11.67□□□□□ -0.54
CPNE4-209ENST00000512055 MTF1Q14872 753 aa11.67□□□□□ -0.54
CPNE4-209ENST00000512055 TTLL6Q8N841 843 aa11.67□□□□□ -0.54
CPNE4-209ENST00000512055 PIGOQ8TEQ8 1089 aa11.67□□□□□ -0.54
CPNE4-209ENST00000512055 PAGR1Q9BTK6 254 aa11.67□□□□□ -0.54
CPNE4-209ENST00000512055 NOP56O00567 594 aaKnown RBP11.67□□□□□ -0.54
CPNE4-209ENST00000512055 EIF4A3P38919 411 aaKnown RBP11.67□□□□□ -0.54
CPNE4-209ENST00000512055 IFT122Q9HBG6 1241 aa11.67□□□□□ -0.54
CPNE4-209ENST00000512055 MTMR4Q9NYA4 1195 aa11.67□□□□□ -0.54
CPNE4-209ENST00000512055 ATF5Q9Y2D1 282 aaPredicted RBP11.67□□□□□ -0.54
CPNE4-209ENST00000512055 ORC6Q9Y5N6 252 aa11.67□□□□□ -0.54
CPNE4-209ENST00000512055 MCF2P10911 925 aa11.67□□□□□ -0.54
CPNE4-209ENST00000512055 MAGEA9P43362 315 aa11.67□□□□□ -0.54
CPNE4-209ENST00000512055 EHHADHQ08426 723 aa11.67□□□□□ -0.54
CPNE4-209ENST00000512055 NTRK3Q16288 839 aa11.67□□□□□ -0.54
CPNE4-209ENST00000512055 CEP55Q53EZ4 464 aa11.67□□□□□ -0.54
CPNE4-209ENST00000512055 TNS2Q63HR2 1409 aa11.67□□□□□ -0.54
CPNE4-209ENST00000512055 LRP10Q7Z4F1 713 aa11.67□□□□□ -0.54
CPNE4-209ENST00000512055 VGLL2Q8N8G2 317 aa11.67□□□□□ -0.54
CPNE4-209ENST00000512055 RETREG2Q8NC44 543 aa11.67□□□□□ -0.54
CPNE4-209ENST00000512055 FGD4Q96M96 766 aa11.67□□□□□ -0.54
CPNE4-209ENST00000512055 CAPN11Q9UMQ6 739 aa11.67□□□□□ -0.54
CPNE4-209ENST00000512055 HYOU1Q9Y4L1 999 aa11.67□□□□□ -0.54
CPNE4-209ENST00000512055 POTECB2RU33 542 aa11.66□□□□□ -0.54
CPNE4-209ENST00000512055 CASP2P42575 452 aa11.66□□□□□ -0.54
CPNE4-209ENST00000512055 CCZ1BP86790 482 aa11.66□□□□□ -0.54
CPNE4-209ENST00000512055 CCZ1P86791 482 aaPredicted RBP11.66□□□□□ -0.54
CPNE4-209ENST00000512055 FAM83BQ5T0W9 1011 aa11.66□□□□□ -0.54
CPNE4-209ENST00000512055 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.66□□□□□ -0.54
CPNE4-209ENST00000512055 RABGGTAQ92696 567 aa11.66□□□□□ -0.54
CPNE4-209ENST00000512055 OMA1Q96E52 524 aa11.66□□□□□ -0.54
CPNE4-209ENST00000512055 METTL14Q9HCE5 456 aaKnown RBP11.66□□□□□ -0.54
CPNE4-209ENST00000512055 CAMTA1Q9Y6Y1 1673 aa11.66□□□□□ -0.54
CPNE4-209ENST00000512055 KDM4FA0A1W2PPD8 638 aa11.66□□□□□ -0.54
CPNE4-209ENST00000512055 TNNI1P19237 187 aa11.66□□□□□ -0.54
CPNE4-209ENST00000512055 STAT3P40763 770 aa11.66□□□□□ -0.54
CPNE4-209ENST00000512055 FBXO38Q6PIJ6 1188 aa11.66□□□□□ -0.54
CPNE4-209ENST00000512055 MCF2L2Q86YR7 1114 aa11.66□□□□□ -0.54
CPNE4-209ENST00000512055 FAM133AQ8N9E0 248 aa11.66□□□□□ -0.54
CPNE4-209ENST00000512055 SMIM22K7EJ46 135 aa11.66□□□□□ -0.54
CPNE4-209ENST00000512055 TPD52L2O43399 206 aaKnown RBP11.66□□□□□ -0.54
CPNE4-209ENST00000512055 HLA-DPA1P20036 260 aa11.66□□□□□ -0.54
CPNE4-209ENST00000512055 TOB1P50616 345 aaPredicted RBP11.66□□□□□ -0.54
CPNE4-209ENST00000512055 SLC44A4Q53GD3 710 aa11.66□□□□□ -0.54
CPNE4-209ENST00000512055 UNC13DQ70J99 1090 aa11.66□□□□□ -0.54
CPNE4-209ENST00000512055 ADAT2Q7Z6V5 191 aaKnown RBP11.66□□□□□ -0.54
CPNE4-209ENST00000512055 SNRNP27Q8WVK2 155 aaKnown RBP11.66□□□□□ -0.54
CPNE4-209ENST00000512055 TMEM60Q9H2L4 133 aa11.66□□□□□ -0.54
CPNE4-209ENST00000512055 ABHD10Q9NUJ1 306 aa11.66□□□□□ -0.54
CPNE4-209ENST00000512055 EPS15L1Q9UBC2 864 aa11.66□□□□□ -0.54
CPNE4-209ENST00000512055 RGPD8O14715 1765 aaPredicted RBP11.66□□□□□ -0.54
CPNE4-209ENST00000512055 LGALS16A8MUM7 142 aa11.66□□□□□ -0.54
CPNE4-209ENST00000512055 DLATP10515 647 aaKnown RBP11.66□□□□□ -0.54
CPNE4-209ENST00000512055 ACTN3Q08043 901 aaPredicted RBP11.66□□□□□ -0.54
CPNE4-209ENST00000512055 KRT26Q7Z3Y9 468 aa11.66□□□□□ -0.54
CPNE4-209ENST00000512055 TRIM8Q9BZR9 551 aa11.66□□□□□ -0.54
CPNE4-209ENST00000512055 PCIF1Q9H4Z3 704 aa11.66□□□□□ -0.54
CPNE4-209ENST00000512055 NFAT5O94916 1531 aa11.66□□□□□ -0.54
CPNE4-209ENST00000512055 GRK2P25098 689 aa11.65□□□□□ -0.54
CPNE4-209ENST00000512055 GNL1P36915 607 aaPredicted RBP11.65□□□□□ -0.54
CPNE4-209ENST00000512055 TRAF7Q6Q0C0 670 aa11.65□□□□□ -0.54
CPNE4-209ENST00000512055 ILDR1Q86SU0 546 aaPredicted RBP11.65□□□□□ -0.54
CPNE4-209ENST00000512055 PPM1KQ8N3J5 372 aa11.65□□□□□ -0.54
CPNE4-209ENST00000512055 TMCO5AQ8N6Q1 288 aa11.65□□□□□ -0.54
CPNE4-209ENST00000512055 UBL4BQ8N7F7 174 aa11.65□□□□□ -0.54
CPNE4-209ENST00000512055 CRAMP1Q96RY5 1269 aa11.65□□□□□ -0.54
CPNE4-209ENST00000512055 CXorf56Q9H5V9 222 aa11.65□□□□□ -0.54
CPNE4-209ENST00000512055 POLE3Q9NRF9 147 aa11.65□□□□□ -0.54
CPNE4-209ENST00000512055 RHBDL2Q9NX52 303 aa11.65□□□□□ -0.54
CPNE4-209ENST00000512055 KNDC1Q76NI1 1749 aa11.65□□□□□ -0.54
CPNE4-209ENST00000512055 APOA1P02647 267 aa11.65□□□□□ -0.54
CPNE4-209ENST00000512055 RWDD2BP57060 319 aa11.65□□□□□ -0.54
CPNE4-209ENST00000512055 E4F1Q66K89 784 aaPredicted RBP11.65□□□□□ -0.54
CPNE4-209ENST00000512055 LRRC8CQ8TDW0 803 aa11.65□□□□□ -0.54
CPNE4-209ENST00000512055 MAP3K14Q99558 947 aa11.65□□□□□ -0.54
CPNE4-209ENST00000512055 ZNF341Q9BYN7 854 aa11.65□□□□□ -0.54
CPNE4-209ENST00000512055 ZNF277Q9NRM2 450 aaPredicted RBP11.65□□□□□ -0.54
CPNE4-209ENST00000512055 TEKT2Q9UIF3 430 aa11.65□□□□□ -0.54
CPNE4-209ENST00000512055 ANGPTL2Q9UKU9 493 aa11.65□□□□□ -0.54
CPNE4-209ENST00000512055 AKAP12Q02952 1782 aa11.65□□□□□ -0.54
CPNE4-209ENST00000512055 H0Y3Z8 333 aa11.65□□□□□ -0.54
CPNE4-209ENST00000512055 GABPAQ06546 454 aa11.65□□□□□ -0.54
CPNE4-209ENST00000512055 OTUD6AQ7L8S5 288 aa11.65□□□□□ -0.54
CPNE4-209ENST00000512055 TBC1D1Q86TI0 1168 aaPredicted RBP11.65□□□□□ -0.54
CPNE4-209ENST00000512055 POTEFA5A3E0 1075 aa11.65□□□□□ -0.54
CPNE4-209ENST00000512055 MOCS3O95396 460 aa11.65□□□□□ -0.54
CPNE4-209ENST00000512055 POTEIP0CG38 1075 aa11.65□□□□□ -0.54
CPNE4-209ENST00000512055 MRPL28Q13084 256 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms