RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 ZFR2Q9UPR6 939 aaKnown RBP4.52□□□□□ -1.69
CHD1-207ENST00000511628 A0A087X0B3 334 aa4.51□□□□□ -1.69
CHD1-207ENST00000511628 UBA6A0AVT1 1052 aaPredicted RBP4.51□□□□□ -1.69
CHD1-207ENST00000511628 FAM83GA6ND36 823 aa4.51□□□□□ -1.69
CHD1-207ENST00000511628 GOLGA8BA8MQT2 603 aa4.51□□□□□ -1.69
CHD1-207ENST00000511628 PPM1GO15355 546 aaPredicted RBP4.51□□□□□ -1.69
CHD1-207ENST00000511628 MAFGO15525 162 aa4.51□□□□□ -1.69
CHD1-207ENST00000511628 GAS7O60861 476 aa4.51□□□□□ -1.69
CHD1-207ENST00000511628 DNAJC6O75061 913 aa4.51□□□□□ -1.69
CHD1-207ENST00000511628 RFPL3O75679 317 aa4.51□□□□□ -1.69
CHD1-207ENST00000511628 DNAJC8O75937 253 aaPredicted RBP4.51□□□□□ -1.69
CHD1-207ENST00000511628 APOL3O95236 402 aa4.51□□□□□ -1.69
CHD1-207ENST00000511628 CYP17A1P05093 508 aa4.51□□□□□ -1.69
CHD1-207ENST00000511628 KCNA6P17658 529 aa4.51□□□□□ -1.69
CHD1-207ENST00000511628 NCLP19338 710 aaKnown RBP4.51□□□□□ -1.69
CHD1-207ENST00000511628 SDHAP31040 664 aa4.51□□□□□ -1.69
CHD1-207ENST00000511628 MRE11P49959 708 aa4.51□□□□□ -1.69
CHD1-207ENST00000511628 STAT5BP51692 787 aa4.51□□□□□ -1.69
CHD1-207ENST00000511628 AMPD3Q01432 767 aa4.51□□□□□ -1.69
CHD1-207ENST00000511628 SLC6A3Q01959 620 aa4.51□□□□□ -1.69
CHD1-207ENST00000511628 ZNF460Q14592 562 aa4.51□□□□□ -1.69
CHD1-207ENST00000511628 PCOLCEQ15113 449 aa4.51□□□□□ -1.69
CHD1-207ENST00000511628 STILQ15468 1287 aa4.51□□□□□ -1.69
CHD1-207ENST00000511628 RNF151Q2KHN1 245 aa4.51□□□□□ -1.69
CHD1-207ENST00000511628 CATSPEREQ5SY80 951 aa4.51□□□□□ -1.69
CHD1-207ENST00000511628 RNF187Q5TA31 235 aaPredicted RBP4.51□□□□□ -1.69
CHD1-207ENST00000511628 PRAMEF9Q5VWM5 478 aa4.51□□□□□ -1.69
CHD1-207ENST00000511628 FSTL4Q6MZW2 842 aa4.51□□□□□ -1.69
CHD1-207ENST00000511628 TIGD7Q6NT04 549 aaPredicted RBP4.51□□□□□ -1.69
CHD1-207ENST00000511628 CNNM4Q6P4Q7 775 aa4.51□□□□□ -1.69
CHD1-207ENST00000511628 NME9Q86XW9 330 aa4.51□□□□□ -1.69
CHD1-207ENST00000511628 THNSL2Q86YJ6 484 aa4.51□□□□□ -1.69
CHD1-207ENST00000511628 PASD1Q8IV76 773 aa4.51□□□□□ -1.69
CHD1-207ENST00000511628 NIM1KQ8IY84 436 aa4.51□□□□□ -1.69
CHD1-207ENST00000511628 OR14K1Q8NGZ2 314 aa4.51□□□□□ -1.69
CHD1-207ENST00000511628 TUBGCP5Q96RT8 1024 aa4.51□□□□□ -1.69
CHD1-207ENST00000511628 MEGF9Q9H1U4 602 aa4.51□□□□□ -1.69
CHD1-207ENST00000511628 OR10A2Q9H208 303 aa4.51□□□□□ -1.69
CHD1-207ENST00000511628 SEMA4AQ9H3S1 761 aa4.51□□□□□ -1.69
CHD1-207ENST00000511628 SPC25Q9HBM1 224 aa4.51□□□□□ -1.69
CHD1-207ENST00000511628 SAE1Q9UBE0 346 aaPredicted RBP4.51□□□□□ -1.69
CHD1-207ENST00000511628 OAZ3Q9UMX2 235 aa4.51□□□□□ -1.69
CHD1-207ENST00000511628 PRKAB1Q9Y478 270 aa4.51□□□□□ -1.69
CHD1-207ENST00000511628 COL4A3BPQ9Y5P4 624 aa4.51□□□□□ -1.69
CHD1-207ENST00000511628 H2AFYO75367 372 aaKnown RBP4.5□□□□□ -1.69
CHD1-207ENST00000511628 MPIG6BO95866 241 aa4.5□□□□□ -1.69
CHD1-207ENST00000511628 POU3F3P20264 500 aaPredicted RBP4.5□□□□□ -1.69
CHD1-207ENST00000511628 FNTBP49356 437 aa4.5□□□□□ -1.69
CHD1-207ENST00000511628 SESN2P58004 480 aaPredicted RBP4.5□□□□□ -1.69
CHD1-207ENST00000511628 HHEXQ03014 270 aa4.5□□□□□ -1.69
CHD1-207ENST00000511628 EIF4HQ15056 248 aaKnown RBP4.5□□□□□ -1.69
CHD1-207ENST00000511628 TTC38Q5R3I4 469 aa4.5□□□□□ -1.69
CHD1-207ENST00000511628 AGBL4Q5VU57 503 aa4.5□□□□□ -1.69
CHD1-207ENST00000511628 CDCA2Q69YH5 1023 aaPredicted RBP4.5□□□□□ -1.69
CHD1-207ENST00000511628 SLFN12LQ6IEE8 588 aa4.5□□□□□ -1.69
CHD1-207ENST00000511628 TCTN3Q6NUS6 607 aa4.5□□□□□ -1.69
CHD1-207ENST00000511628 KIAA1958Q8N8K9 716 aa4.5□□□□□ -1.69
CHD1-207ENST00000511628 RPGRQ92834 1020 aaKnown RBP4.5□□□□□ -1.69
CHD1-207ENST00000511628 GCDHQ92947 438 aaPredicted RBP4.5□□□□□ -1.69
CHD1-207ENST00000511628 MFSD3Q96ES6 412 aa4.5□□□□□ -1.69
CHD1-207ENST00000511628 ADOQ96SZ5 270 aa4.5□□□□□ -1.69
CHD1-207ENST00000511628 FOXB1Q99853 325 aa4.5□□□□□ -1.69
CHD1-207ENST00000511628 DPYSL5Q9BPU6 564 aa4.5□□□□□ -1.69
CHD1-207ENST00000511628 SSBP3Q9BWW4 388 aaPredicted RBP4.5□□□□□ -1.69
CHD1-207ENST00000511628 PCDH12Q9NPG4 1184 aa4.5□□□□□ -1.69
CHD1-207ENST00000511628 TOMM22Q9NS69 142 aa4.5□□□□□ -1.69
CHD1-207ENST00000511628 SYNPO2Q9UMS6 1093 aa4.5□□□□□ -1.69
CHD1-207ENST00000511628 PLAAQ9Y263 795 aa4.5□□□□□ -1.69
CHD1-207ENST00000511628 TSC22D4Q9Y3Q8 395 aa4.5□□□□□ -1.69
CHD1-207ENST00000511628 RASSF10A6NK89 507 aa4.49□□□□□ -1.69
CHD1-207ENST00000511628 GSG1L2A8MUP6 293 aa4.49□□□□□ -1.69
CHD1-207ENST00000511628 PATE3B3GLJ2 98 aa4.49□□□□□ -1.69
CHD1-207ENST00000511628 KPNA6O60684 536 aa4.49□□□□□ -1.69
CHD1-207ENST00000511628 VIL1P09327 827 aaKnown RBP4.49□□□□□ -1.69
CHD1-207ENST00000511628 ZBTB48P10074 688 aaPredicted RBP4.49□□□□□ -1.69
CHD1-207ENST00000511628 MYCLP1P12525 358 aaPredicted RBP4.49□□□□□ -1.69
CHD1-207ENST00000511628 HSP90B1P14625 803 aaKnown RBP4.49□□□□□ -1.69
CHD1-207ENST00000511628 SLC9A1P19634 815 aa4.49□□□□□ -1.69
CHD1-207ENST00000511628 COMTP21964 271 aa4.49□□□□□ -1.69
CHD1-207ENST00000511628 RPS19P39019 145 aaKnown RBP4.49□□□□□ -1.69
CHD1-207ENST00000511628 ALDH6A1Q02252 535 aaKnown RBP4.49□□□□□ -1.69
CHD1-207ENST00000511628 PRKD1Q15139 912 aaPredicted RBP4.49□□□□□ -1.69
CHD1-207ENST00000511628 TAF7LQ5H9L4 462 aa4.49□□□□□ -1.69
CHD1-207ENST00000511628 KANK2Q63ZY3 851 aa4.49□□□□□ -1.69
CHD1-207ENST00000511628 LARP4Q71RC2 724 aaKnown RBP eCLIP4.49□□□□□ -1.69
CHD1-207ENST00000511628 OTOP1Q7RTM1 612 aa4.49□□□□□ -1.69
CHD1-207ENST00000511628 RPUSD2Q8IZ73 545 aaKnown RBP4.49□□□□□ -1.69
CHD1-207ENST00000511628 UBR7Q8N806 425 aa4.49□□□□□ -1.69
CHD1-207ENST00000511628 C7orf31Q8N865 590 aa4.49□□□□□ -1.69
CHD1-207ENST00000511628 Q8TCH9 128 aa4.49□□□□□ -1.69
CHD1-207ENST00000511628 FAM89AQ96GI7 184 aa4.49□□□□□ -1.69
CHD1-207ENST00000511628 TARS2Q9BW92 718 aaKnown RBP4.49□□□□□ -1.69
CHD1-207ENST00000511628 C1QTNF3Q9BXJ4 246 aa4.49□□□□□ -1.69
CHD1-207ENST00000511628 B4GALT6Q9UBX8 382 aa4.49□□□□□ -1.69
CHD1-207ENST00000511628 CBX4O00257 560 aa4.48□□□□□ -1.69
CHD1-207ENST00000511628 DAPK3O43293 454 aa4.48□□□□□ -1.69
CHD1-207ENST00000511628 FOXS1O43638 330 aa4.48□□□□□ -1.69
CHD1-207ENST00000511628 PDE8AO60658 829 aa4.48□□□□□ -1.69
CHD1-207ENST00000511628 RGS3P49796 1198 aa4.48□□□□□ -1.69
CHD1-207ENST00000511628 ADCY1Q08828 1119 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms