RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 SARSP49591 514 aaKnown RBP8.92□□□□□ -0.98
SMAD1-209ENST00000511125 MORC3Q14149 939 aa8.92□□□□□ -0.98
SMAD1-209ENST00000511125 FAM26FQ5R3K3 315 aa8.92□□□□□ -0.98
SMAD1-209ENST00000511125 HYIQ5T013 277 aa8.92□□□□□ -0.98
SMAD1-209ENST00000511125 CCDC65Q8IXS2 484 aa8.92□□□□□ -0.98
SMAD1-209ENST00000511125 DAW1Q8N136 415 aa8.92□□□□□ -0.98
SMAD1-209ENST00000511125 PPTC7Q8NI37 304 aa8.92□□□□□ -0.98
SMAD1-209ENST00000511125 NELFBQ8WX92 580 aa8.92□□□□□ -0.98
SMAD1-209ENST00000511125 C16orf70Q9BSU1 422 aa8.92□□□□□ -0.98
SMAD1-209ENST00000511125 POLR3FQ9H1D9 316 aaPredicted RBP8.92□□□□□ -0.98
SMAD1-209ENST00000511125 SMARCAD1Q9H4L7 1026 aa8.92□□□□□ -0.98
SMAD1-209ENST00000511125 FANCLQ9NW38 375 aa8.92□□□□□ -0.98
SMAD1-209ENST00000511125 ERAP1Q9NZ08 941 aa8.92□□□□□ -0.98
SMAD1-209ENST00000511125 SYNRGQ9UMZ2 1314 aa8.92□□□□□ -0.98
SMAD1-209ENST00000511125 GOLGA6L19H0YKK7 550 aa8.92□□□□□ -0.98
SMAD1-209ENST00000511125 K7ENM7 598 aa8.92□□□□□ -0.98
SMAD1-209ENST00000511125 ASGR1P07306 291 aa8.92□□□□□ -0.98
SMAD1-209ENST00000511125 XRCC5P13010 732 aaKnown RBP8.92□□□□□ -0.98
SMAD1-209ENST00000511125 HIC1Q14526 733 aa8.92□□□□□ -0.98
SMAD1-209ENST00000511125 EFCAB12Q6NXP0 572 aa8.92□□□□□ -0.98
SMAD1-209ENST00000511125 GPIHBP1Q8IV16 184 aa8.92□□□□□ -0.98
SMAD1-209ENST00000511125 FAM178BQ8IXR5 827 aa8.92□□□□□ -0.98
SMAD1-209ENST00000511125 SLC7A3Q8WY07 619 aa8.92□□□□□ -0.98
SMAD1-209ENST00000511125 CCDC47Q96A33 483 aaKnown RBP8.92□□□□□ -0.98
SMAD1-209ENST00000511125 MED15Q96RN5 788 aa8.92□□□□□ -0.98
SMAD1-209ENST00000511125 PYM1Q9BRP8 204 aaKnown RBP8.92□□□□□ -0.98
SMAD1-209ENST00000511125 PCIF1Q9H4Z3 704 aa8.92□□□□□ -0.98
SMAD1-209ENST00000511125 GRPEL1Q9HAV7 217 aa8.92□□□□□ -0.98
SMAD1-209ENST00000511125 XPNPEP1Q9NQW7 623 aa8.92□□□□□ -0.98
SMAD1-209ENST00000511125 AKT3Q9Y243 479 aa8.92□□□□□ -0.98
SMAD1-209ENST00000511125 RBBP6Q7Z6E9 1792 aaKnown RBP8.92□□□□□ -0.98
SMAD1-209ENST00000511125 NKRFO15226 690 aaKnown RBP eCLIP8.92□□□□□ -0.98
SMAD1-209ENST00000511125 SEPT4O43236 478 aa8.92□□□□□ -0.98
SMAD1-209ENST00000511125 PPFIA4O75335 1185 aa8.92□□□□□ -0.98
SMAD1-209ENST00000511125 ATG7O95352 703 aa8.92□□□□□ -0.98
SMAD1-209ENST00000511125 CTSHP09668 335 aa8.92□□□□□ -0.98
SMAD1-209ENST00000511125 CDK11BP21127 795 aaKnown RBP8.92□□□□□ -0.98
SMAD1-209ENST00000511125 PPFIA1Q13136 1202 aa8.92□□□□□ -0.98
SMAD1-209ENST00000511125 EMC2Q15006 297 aa8.92□□□□□ -0.98
SMAD1-209ENST00000511125 UNC13DQ70J99 1090 aa8.92□□□□□ -0.98
SMAD1-209ENST00000511125 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.92□□□□□ -0.98
SMAD1-209ENST00000511125 GSDMAQ96QA5 445 aa8.92□□□□□ -0.98
SMAD1-209ENST00000511125 HMX1Q9NP08 348 aaPredicted RBP8.92□□□□□ -0.98
SMAD1-209ENST00000511125 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.92□□□□□ -0.98
SMAD1-209ENST00000511125 PPP1R3GB7ZBB8 358 aa8.91□□□□□ -0.98
SMAD1-209ENST00000511125 SEZ6Q53EL9 994 aa8.91□□□□□ -0.98
SMAD1-209ENST00000511125 RBM43Q6ZSC3 357 aaKnown RBP8.91□□□□□ -0.98
SMAD1-209ENST00000511125 TEX2Q8IWB9 1127 aa8.91□□□□□ -0.98
SMAD1-209ENST00000511125 SYCP3Q8IZU3 236 aa8.91□□□□□ -0.98
SMAD1-209ENST00000511125 ASAP3Q8TDY4 903 aa8.91□□□□□ -0.98
SMAD1-209ENST00000511125 PRPF31Q8WWY3 499 aaKnown RBP8.91□□□□□ -0.98
SMAD1-209ENST00000511125 KAT2BQ92831 832 aa8.91□□□□□ -0.98
SMAD1-209ENST00000511125 FAM84AQ96KN4 292 aa8.91□□□□□ -0.98
SMAD1-209ENST00000511125 CUEDC2Q9H467 287 aa8.91□□□□□ -0.98
SMAD1-209ENST00000511125 MMRN2Q9H8L6 949 aa8.91□□□□□ -0.98
SMAD1-209ENST00000511125 PARVGQ9HBI0 331 aa8.91□□□□□ -0.98
SMAD1-209ENST00000511125 SPC25Q9HBM1 224 aa8.91□□□□□ -0.98
SMAD1-209ENST00000511125 HDAC6Q9UBN7 1215 aa8.91□□□□□ -0.98
SMAD1-209ENST00000511125 MYH9P35579 1960 aaKnown RBP8.91□□□□□ -0.98
SMAD1-209ENST00000511125 TREHO43280 583 aa8.91□□□□□ -0.98
SMAD1-209ENST00000511125 TMEM132AQ24JP5 1023 aa8.91□□□□□ -0.98
SMAD1-209ENST00000511125 ZNF658Q5TYW1 1059 aaPredicted RBP8.91□□□□□ -0.98
SMAD1-209ENST00000511125 ATP8B4Q8TF62 1192 aa8.91□□□□□ -0.98
SMAD1-209ENST00000511125 RNF19AQ9NV58 838 aa8.91□□□□□ -0.98
SMAD1-209ENST00000511125 NFE2L3Q9Y4A8 694 aa8.91□□□□□ -0.98
SMAD1-209ENST00000511125 MORC2Q9Y6X9 1032 aaPredicted RBP8.91□□□□□ -0.98
SMAD1-209ENST00000511125 RBM47A0AV96 593 aaKnown RBP8.9□□□□□ -0.98
SMAD1-209ENST00000511125 AP5Z1O43299 807 aa8.9□□□□□ -0.98
SMAD1-209ENST00000511125 MFSD10Q14728 455 aa8.9□□□□□ -0.98
SMAD1-209ENST00000511125 KIZQ2M2Z5 673 aa8.9□□□□□ -0.98
SMAD1-209ENST00000511125 BRDTQ58F21 947 aaPredicted RBP8.9□□□□□ -0.98
SMAD1-209ENST00000511125 ANKRD40Q6AI12 368 aa8.9□□□□□ -0.98
SMAD1-209ENST00000511125 DHX40Q8IX18 779 aaKnown RBP8.9□□□□□ -0.98
SMAD1-209ENST00000511125 C7orf31Q8N865 590 aa8.9□□□□□ -0.98
SMAD1-209ENST00000511125 SPC24Q8NBT2 197 aa8.9□□□□□ -0.98
SMAD1-209ENST00000511125 ATP6V0A4Q9HBG4 840 aa8.9□□□□□ -0.98
SMAD1-209ENST00000511125 ZNF215Q9UL58 517 aaPredicted RBP8.9□□□□□ -0.98
SMAD1-209ENST00000511125 PTPN22Q9Y2R2 807 aa8.9□□□□□ -0.98
SMAD1-209ENST00000511125 IGSF9BQ9UPX0 1349 aa8.9□□□□□ -0.98
SMAD1-209ENST00000511125 GOLGA8IPA6NC78 632 aa8.9□□□□□ -0.98
SMAD1-209ENST00000511125 GOLGA8JA6NMD2 632 aa8.9□□□□□ -0.98
SMAD1-209ENST00000511125 DUSP11O75319 330 aaKnown RBP8.9□□□□□ -0.98
SMAD1-209ENST00000511125 SMIM10L2AP0DMW4 78 aa8.9□□□□□ -0.98
SMAD1-209ENST00000511125 SMIM10L2BP0DMW5 78 aa8.9□□□□□ -0.98
SMAD1-209ENST00000511125 XRCC6P12956 609 aaKnown RBP eCLIP8.9□□□□□ -0.98
SMAD1-209ENST00000511125 MATR3P43243 847 aaKnown RBP eCLIP8.9□□□□□ -0.98
SMAD1-209ENST00000511125 CYP2J2P51589 502 aa8.9□□□□□ -0.98
SMAD1-209ENST00000511125 MAPK7Q13164 816 aa8.9□□□□□ -0.98
SMAD1-209ENST00000511125 GRIK4Q16099 956 aa8.9□□□□□ -0.98
SMAD1-209ENST00000511125 NBPF20Q3BBV1 942 aa8.9□□□□□ -0.98
SMAD1-209ENST00000511125 RNF149Q8NC42 400 aa8.9□□□□□ -0.98
SMAD1-209ENST00000511125 ZSWIM2Q8NEG5 633 aa8.9□□□□□ -0.98
SMAD1-209ENST00000511125 FAM200AQ8TCP9 573 aa8.9□□□□□ -0.98
SMAD1-209ENST00000511125 NEK9Q8TD19 979 aa8.9□□□□□ -0.98
SMAD1-209ENST00000511125 BICD1Q96G01 975 aa8.9□□□□□ -0.98
SMAD1-209ENST00000511125 SRRTQ9BXP5 876 aaKnown RBP8.9□□□□□ -0.98
SMAD1-209ENST00000511125 SUCLA2Q9P2R7 463 aaPredicted RBP8.9□□□□□ -0.98
SMAD1-209ENST00000511125 DDX20Q9UHI6 824 aaKnown RBP8.9□□□□□ -0.98
SMAD1-209ENST00000511125 COL4A3BPQ9Y5P4 624 aa8.9□□□□□ -0.98
SMAD1-209ENST00000511125 IGKV6D-21A0A0A0MT36 114 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms