RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, human

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHFR-208	ENST00000511001	C8orf34	Q49A92	452 aa		13.58	□□□□□ -0.24
CHFR-208	ENST00000511001	PIK3AP1	Q6ZUJ8	805 aa		13.58	□□□□□ -0.24
CHFR-208	ENST00000511001	NEK8	Q86SG6	692 aa		13.58	□□□□□ -0.24
CHFR-208	ENST00000511001	FAM228A	Q86W67	206 aa		13.58	□□□□□ -0.24
CHFR-208	ENST00000511001	UHRF1	Q96T88	793 aa	Predicted RBP	13.58	□□□□□ -0.24
CHFR-208	ENST00000511001	OSMR	Q99650	979 aa		13.58	□□□□□ -0.24
CHFR-208	ENST00000511001	KCNMB3	Q9NPA1	279 aa		13.58	□□□□□ -0.24
CHFR-208	ENST00000511001	NRBP2	Q9NSY0	501 aa		13.58	□□□□□ -0.24
CHFR-208	ENST00000511001	VAV3	Q9UKW4	847 aa		13.58	□□□□□ -0.24
CHFR-208	ENST00000511001	GINS2	Q9Y248	185 aa		13.58	□□□□□ -0.24
CHFR-208	ENST00000511001	PLXNA4	Q9HCM2	1894 aa		13.58	□□□□□ -0.24
CHFR-208	ENST00000511001	TMEM150B	A6NC51	233 aa		13.57	□□□□□ -0.24
CHFR-208	ENST00000511001		H3BNC9	293 aa		13.57	□□□□□ -0.24
CHFR-208	ENST00000511001	RPS6KA5	O75582	802 aa		13.57	□□□□□ -0.24
CHFR-208	ENST00000511001	PLA2G5	P39877	138 aa		13.57	□□□□□ -0.24
CHFR-208	ENST00000511001	CRYBB1	P53674	252 aa	Predicted RBP	13.57	□□□□□ -0.24
CHFR-208	ENST00000511001	NFX1	Q12986	1120 aa	Known RBP	13.57	□□□□□ -0.24
CHFR-208	ENST00000511001	SKIV2L	Q15477	1246 aa	Known RBP	13.57	□□□□□ -0.24
CHFR-208	ENST00000511001	KIZ	Q2M2Z5	673 aa		13.57	□□□□□ -0.24
CHFR-208	ENST00000511001	PPP4R3A	Q6IN85	833 aa		13.57	□□□□□ -0.24
CHFR-208	ENST00000511001	EFCAB12	Q6NXP0	572 aa		13.57	□□□□□ -0.24
CHFR-208	ENST00000511001	NPAS4	Q8IUM7	802 aa		13.57	□□□□□ -0.24
CHFR-208	ENST00000511001	LRRC71	Q8N4P6	559 aa		13.57	□□□□□ -0.24
CHFR-208	ENST00000511001	FIBCD1	Q8N539	461 aa		13.57	□□□□□ -0.24
CHFR-208	ENST00000511001	METTL13	Q8N6R0	699 aa		13.57	□□□□□ -0.24
CHFR-208	ENST00000511001	WASF1	Q92558	559 aa		13.57	□□□□□ -0.24
CHFR-208	ENST00000511001	HAS1	Q92839	578 aa		13.57	□□□□□ -0.24
CHFR-208	ENST00000511001	CLP1	Q92989	425 aa	Known RBP	13.57	□□□□□ -0.24
CHFR-208	ENST00000511001	KIF2C	Q99661	725 aa		13.57	□□□□□ -0.24
CHFR-208	ENST00000511001	NIFK	Q9BYG3	293 aa	Known RBP	13.57	□□□□□ -0.24
CHFR-208	ENST00000511001	ADAMTS10	Q9H324	1103 aa		13.57	□□□□□ -0.24
CHFR-208	ENST00000511001	C5orf67	F2Z3F1	127 aa		13.56	□□□□□ -0.24
CHFR-208	ENST00000511001	GCFC2	P16383	781 aa	Known RBP	13.56	□□□□□ -0.24
CHFR-208	ENST00000511001	KRT2	P35908	639 aa		13.56	□□□□□ -0.24
CHFR-208	ENST00000511001	SARS	P49591	514 aa	Known RBP	13.56	□□□□□ -0.24
CHFR-208	ENST00000511001	GATM	P50440	423 aa		13.56	□□□□□ -0.24
CHFR-208	ENST00000511001	PPP2R5C	Q13362	524 aa		13.56	□□□□□ -0.24
CHFR-208	ENST00000511001	GPM6B	Q13491	265 aa		13.56	□□□□□ -0.24
CHFR-208	ENST00000511001	DSC3	Q14574	896 aa		13.56	□□□□□ -0.24
CHFR-208	ENST00000511001	MRPL38	Q96DV4	380 aa	Known RBP	13.56	□□□□□ -0.24
CHFR-208	ENST00000511001	FAM20A	Q96MK3	541 aa		13.56	□□□□□ -0.24
CHFR-208	ENST00000511001	ST3GAL5	Q9UNP4	418 aa		13.56	□□□□□ -0.24
CHFR-208	ENST00000511001	IGKV6-21	A0A0C4DH24	114 aa		13.55	□□□□□ -0.24
CHFR-208	ENST00000511001		C9IYK1	514 aa		13.55	□□□□□ -0.24
CHFR-208	ENST00000511001	WNT7A	O00755	349 aa		13.55	□□□□□ -0.24
CHFR-208	ENST00000511001	CCNT1	O60563	726 aa	Known RBP	13.55	□□□□□ -0.24
CHFR-208	ENST00000511001	MMP1	P03956	469 aa		13.55	□□□□□ -0.24
CHFR-208	ENST00000511001	BMP1	P13497	986 aa		13.55	□□□□□ -0.24
CHFR-208	ENST00000511001	CTNNB1	P35222	781 aa		13.55	□□□□□ -0.24
CHFR-208	ENST00000511001	BMPR1A	P36894	532 aa		13.55	□□□□□ -0.24
CHFR-208	ENST00000511001	FOSB	P53539	338 aa		13.55	□□□□□ -0.24
CHFR-208	ENST00000511001	NLRP11	P59045	1033 aa	Known RBP	13.55	□□□□□ -0.24
CHFR-208	ENST00000511001	DRP2	Q13474	957 aa		13.55	□□□□□ -0.24
CHFR-208	ENST00000511001	BTG3	Q14201	252 aa	Predicted RBP	13.55	□□□□□ -0.24
CHFR-208	ENST00000511001	MTERF2	Q49AM1	385 aa		13.55	□□□□□ -0.24
CHFR-208	ENST00000511001	XKR3	Q5GH77	459 aa		13.55	□□□□□ -0.24
CHFR-208	ENST00000511001	POTED	Q86YR6	584 aa		13.55	□□□□□ -0.24
CHFR-208	ENST00000511001	CMTR2	Q8IYT2	770 aa	Known RBP	13.55	□□□□□ -0.24
CHFR-208	ENST00000511001	BANK1	Q8NDB2	785 aa		13.55	□□□□□ -0.24
CHFR-208	ENST00000511001	IL27	Q8NEV9	243 aa		13.55	□□□□□ -0.24
CHFR-208	ENST00000511001	ZNF668	Q96K58	619 aa	Predicted RBP	13.55	□□□□□ -0.24
CHFR-208	ENST00000511001	ADAM2	Q99965	735 aa		13.55	□□□□□ -0.24
CHFR-208	ENST00000511001	SH2D3A	Q9BRG2	576 aa		13.55	□□□□□ -0.24
CHFR-208	ENST00000511001	RGS18	Q9NS28	235 aa		13.55	□□□□□ -0.24
CHFR-208	ENST00000511001	SEPT9	Q9UHD8	586 aa	Predicted RBP	13.55	□□□□□ -0.24
CHFR-208	ENST00000511001	COG5	Q9UP83	839 aa		13.55	□□□□□ -0.24
CHFR-208	ENST00000511001	AKT3	Q9Y243	479 aa		13.55	□□□□□ -0.24
CHFR-208	ENST00000511001	MRPL42	Q9Y6G3	142 aa	Known RBP	13.55	□□□□□ -0.24
CHFR-208	ENST00000511001	XIRP2	A4UGR9	3374 aa		13.54	□□□□□ -0.24
CHFR-208	ENST00000511001	BTBD18	B2RXH4	712 aa		13.54	□□□□□ -0.24
CHFR-208	ENST00000511001	TBX3	O15119	743 aa		13.54	□□□□□ -0.24
CHFR-208	ENST00000511001	GPR182	O15218	404 aa		13.54	□□□□□ -0.24
CHFR-208	ENST00000511001	RB1	P06400	928 aa		13.54	□□□□□ -0.24
CHFR-208	ENST00000511001	STAG3L1	P0CL83	205 aa		13.54	□□□□□ -0.24
CHFR-208	ENST00000511001	TMOD1	P28289	359 aa		13.54	□□□□□ -0.24
CHFR-208	ENST00000511001	GPC3	P51654	580 aa		13.54	□□□□□ -0.24
CHFR-208	ENST00000511001	KCNQ1	P51787	676 aa		13.54	□□□□□ -0.24
CHFR-208	ENST00000511001	PSMC5	P62195	406 aa		13.54	□□□□□ -0.24
CHFR-208	ENST00000511001	FAM189B	P81408	668 aa		13.54	□□□□□ -0.24
CHFR-208	ENST00000511001	SPIRE1	Q08AE8	756 aa		13.54	□□□□□ -0.24
CHFR-208	ENST00000511001	TBC1D8B	Q0IIM8	1120 aa		13.54	□□□□□ -0.24
CHFR-208	ENST00000511001	ODR4	Q5SWX8	454 aa		13.54	□□□□□ -0.24
CHFR-208	ENST00000511001	FAM43B	Q6ZT52	329 aa	Predicted RBP	13.54	□□□□□ -0.24
CHFR-208	ENST00000511001	ANO5	Q75V66	913 aa		13.54	□□□□□ -0.24
CHFR-208	ENST00000511001	HLA-C	Q95604	372 aa		13.54	□□□□□ -0.24
CHFR-208	ENST00000511001	FAM122A	Q96E09	287 aa		13.54	□□□□□ -0.24
CHFR-208	ENST00000511001	NECAB3	Q96P71	396 aa	Predicted RBP	13.54	□□□□□ -0.24
CHFR-208	ENST00000511001	MAP7D2	Q96T17	732 aa		13.54	□□□□□ -0.24
CHFR-208	ENST00000511001	WRAP73	Q9P2S5	460 aa	Predicted RBP	13.54	□□□□□ -0.24
CHFR-208	ENST00000511001	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	13.53	□□□□□ -0.24
CHFR-208	ENST00000511001	GRM6	O15303	877 aa		13.53	□□□□□ -0.24
CHFR-208	ENST00000511001	EIF4B	P23588	611 aa	Known RBP	13.53	□□□□□ -0.24
CHFR-208	ENST00000511001	PAN2	Q504Q3	1202 aa	Known RBP	13.53	□□□□□ -0.24
CHFR-208	ENST00000511001	PLA2G4F	Q68DD2	849 aa		13.53	□□□□□ -0.24
CHFR-208	ENST00000511001	SLC24A5	Q71RS6	500 aa		13.53	□□□□□ -0.24
CHFR-208	ENST00000511001	DIS3L2	Q8IYB7	885 aa	Known RBP	13.53	□□□□□ -0.24
CHFR-208	ENST00000511001	ZNF710	Q8N1W2	664 aa		13.53	□□□□□ -0.24
CHFR-208	ENST00000511001	NAP1L4	Q99733	375 aa	Known RBP	13.53	□□□□□ -0.24
CHFR-208	ENST00000511001	C1orf112	Q9NSG2	853 aa		13.53	□□□□□ -0.24
CHFR-208	ENST00000511001	RNF19A	Q9NV58	838 aa		13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms