RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 TBCELQ5QJ74 424 aa9.85□□□□□ -0.83
PDPN-209ENST00000510906 XRRA1Q6P2D8 792 aa9.85□□□□□ -0.83
PDPN-209ENST00000510906 BLOC1S2Q6QNY1 142 aa9.85□□□□□ -0.83
PDPN-209ENST00000510906 METTL7BQ6UX53 244 aa9.85□□□□□ -0.83
PDPN-209ENST00000510906 Q6ZUG5 572 aa9.85□□□□□ -0.83
PDPN-209ENST00000510906 CYFIP1Q7L576 1253 aa9.85□□□□□ -0.83
PDPN-209ENST00000510906 RPUSD2Q8IZ73 545 aaKnown RBP9.85□□□□□ -0.83
PDPN-209ENST00000510906 MEIOBQ8N635 442 aa9.85□□□□□ -0.83
PDPN-209ENST00000510906 BRF1Q92994 677 aa9.85□□□□□ -0.83
PDPN-209ENST00000510906 TIFAQ96CG3 184 aa9.85□□□□□ -0.83
PDPN-209ENST00000510906 FAM122AQ96E09 287 aa9.85□□□□□ -0.83
PDPN-209ENST00000510906 PGBD1Q96JS3 809 aa9.85□□□□□ -0.83
PDPN-209ENST00000510906 CDX2Q99626 313 aaPredicted RBP9.85□□□□□ -0.83
PDPN-209ENST00000510906 C16orf70Q9BSU1 422 aa9.85□□□□□ -0.83
PDPN-209ENST00000510906 KATNAL1Q9BW62 490 aa9.85□□□□□ -0.83
PDPN-209ENST00000510906 PCDHA6Q9UN73 950 aa9.85□□□□□ -0.83
PDPN-209ENST00000510906 PCDHA8Q9Y5H6 950 aa9.85□□□□□ -0.83
PDPN-209ENST00000510906 SPDYE3A6NKU9 549 aa9.84□□□□□ -0.83
PDPN-209ENST00000510906 STXBP3O00186 592 aa9.84□□□□□ -0.83
PDPN-209ENST00000510906 TNFRSF10AO00220 468 aa9.84□□□□□ -0.83
PDPN-209ENST00000510906 NOP56O00567 594 aaKnown RBP9.84□□□□□ -0.83
PDPN-209ENST00000510906 LGALS2P05162 132 aa9.84□□□□□ -0.83
PDPN-209ENST00000510906 ITGB5P18084 799 aa9.84□□□□□ -0.83
PDPN-209ENST00000510906 RPS6KB1P23443 525 aa9.84□□□□□ -0.83
PDPN-209ENST00000510906 METAP2P50579 478 aaKnown RBP eCLIP9.84□□□□□ -0.83
PDPN-209ENST00000510906 RCAN1P53805 252 aa9.84□□□□□ -0.83
PDPN-209ENST00000510906 BFSP2Q13515 415 aa9.84□□□□□ -0.83
PDPN-209ENST00000510906 NEDD9Q14511 834 aa9.84□□□□□ -0.83
PDPN-209ENST00000510906 NAA30Q147X3 362 aaPredicted RBP9.84□□□□□ -0.83
PDPN-209ENST00000510906 C16orf46Q6P387 395 aa9.84□□□□□ -0.83
PDPN-209ENST00000510906 NLRX1Q86UT6 975 aa9.84□□□□□ -0.83
PDPN-209ENST00000510906 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.84□□□□□ -0.83
PDPN-209ENST00000510906 MYLIPQ8WY64 445 aa9.84□□□□□ -0.83
PDPN-209ENST00000510906 WNT8BQ93098 351 aa9.84□□□□□ -0.83
PDPN-209ENST00000510906 GPR20Q99678 358 aa9.84□□□□□ -0.83
PDPN-209ENST00000510906 PBX4Q9BYU1 374 aa9.84□□□□□ -0.83
PDPN-209ENST00000510906 MTIF3Q9H2K0 278 aaKnown RBP9.84□□□□□ -0.83
PDPN-209ENST00000510906 PPP4R2Q9NY27 417 aa9.84□□□□□ -0.83
PDPN-209ENST00000510906 KIAA1217Q5T5P2 1943 aa9.84□□□□□ -0.83
PDPN-209ENST00000510906 TMEM265A0A087WTH1 108 aa9.83□□□□□ -0.84
PDPN-209ENST00000510906 EML1O00423 815 aa9.83□□□□□ -0.84
PDPN-209ENST00000510906 ATP9AO75110 1047 aa9.83□□□□□ -0.84
PDPN-209ENST00000510906 PFKMP08237 780 aa9.83□□□□□ -0.84
PDPN-209ENST00000510906 KCNA2P16389 499 aa9.83□□□□□ -0.84
PDPN-209ENST00000510906 RFC2P35250 354 aa9.83□□□□□ -0.84
PDPN-209ENST00000510906 ADCY7P51828 1080 aa9.83□□□□□ -0.84
PDPN-209ENST00000510906 CENPCQ03188 943 aa9.83□□□□□ -0.84
PDPN-209ENST00000510906 RBL2Q08999 1139 aa9.83□□□□□ -0.84
PDPN-209ENST00000510906 GPNMBQ14956 572 aa9.83□□□□□ -0.84
PDPN-209ENST00000510906 GRIN2CQ14957 1233 aa9.83□□□□□ -0.84
PDPN-209ENST00000510906 TEAD4Q15561 434 aa9.83□□□□□ -0.84
PDPN-209ENST00000510906 TRIM71Q2Q1W2 868 aaKnown RBP9.83□□□□□ -0.84
PDPN-209ENST00000510906 UTP14CQ5TAP6 766 aaKnown RBP9.83□□□□□ -0.84
PDPN-209ENST00000510906 LRRC8DQ7L1W4 858 aa9.83□□□□□ -0.84
PDPN-209ENST00000510906 CCDC155Q8N6L0 562 aa9.83□□□□□ -0.84
PDPN-209ENST00000510906 CAGE1Q8TC20 777 aa9.83□□□□□ -0.84
PDPN-209ENST00000510906 AFAP1L1Q8TED9 768 aa9.83□□□□□ -0.84
PDPN-209ENST00000510906 GPRASP2Q96D09 838 aa9.83□□□□□ -0.84
PDPN-209ENST00000510906 MYO19Q96H55 970 aa9.83□□□□□ -0.84
PDPN-209ENST00000510906 SENP7Q9BQF6 1050 aa9.83□□□□□ -0.84
PDPN-209ENST00000510906 AGXT2Q9BYV1 514 aa9.83□□□□□ -0.84
PDPN-209ENST00000510906 FTOQ9C0B1 505 aaKnown RBP eCLIP9.83□□□□□ -0.84
PDPN-209ENST00000510906 SAP130Q9H0E3 1048 aa9.83□□□□□ -0.84
PDPN-209ENST00000510906 ZNF576Q9H609 170 aa9.83□□□□□ -0.84
PDPN-209ENST00000510906 RIC8AQ9NPQ8 531 aa9.83□□□□□ -0.84
PDPN-209ENST00000510906 TMEM260Q9NX78 707 aa9.83□□□□□ -0.84
PDPN-209ENST00000510906 BARHL2Q9NY43 387 aa9.83□□□□□ -0.84
PDPN-209ENST00000510906 YBX2Q9Y2T7 364 aaKnown RBP9.83□□□□□ -0.84
PDPN-209ENST00000510906 UBIAD1Q9Y5Z9 338 aa9.83□□□□□ -0.84
PDPN-209ENST00000510906 SLC4A7Q9Y6M7 1214 aa9.83□□□□□ -0.84
PDPN-209ENST00000510906 CCDC196A0A1B0GTZ2 297 aa9.82□□□□□ -0.84
PDPN-209ENST00000510906 SMCO2A6NFE2 343 aa9.82□□□□□ -0.84
PDPN-209ENST00000510906 hCG_1984214I3L0E3 225 aa9.82□□□□□ -0.84
PDPN-209ENST00000510906 PPFIA3O75145 1194 aa9.82□□□□□ -0.84
PDPN-209ENST00000510906 SMIM10L2AP0DMW4 78 aa9.82□□□□□ -0.84
PDPN-209ENST00000510906 SMIM10L2BP0DMW5 78 aa9.82□□□□□ -0.84
PDPN-209ENST00000510906 CKBP12277 381 aa9.82□□□□□ -0.84
PDPN-209ENST00000510906 SELPP16109 830 aa9.82□□□□□ -0.84
PDPN-209ENST00000510906 PSMA5P28066 241 aa9.82□□□□□ -0.84
PDPN-209ENST00000510906 RABGGTBP53611 331 aa9.82□□□□□ -0.84
PDPN-209ENST00000510906 MTMR1Q13613 665 aa9.82□□□□□ -0.84
PDPN-209ENST00000510906 PFKFB3Q16875 520 aaPredicted RBP9.82□□□□□ -0.84
PDPN-209ENST00000510906 FBXL16Q8N461 479 aa9.82□□□□□ -0.84
PDPN-209ENST00000510906 ZNF713Q8N859 430 aaPredicted RBP9.82□□□□□ -0.84
PDPN-209ENST00000510906 CYP2W1Q8TAV3 490 aa9.82□□□□□ -0.84
PDPN-209ENST00000510906 ZDHHC1Q8WTX9 485 aa9.82□□□□□ -0.84
PDPN-209ENST00000510906 PHKBQ93100 1093 aa9.82□□□□□ -0.84
PDPN-209ENST00000510906 USP26Q9BXU7 913 aa9.82□□□□□ -0.84
PDPN-209ENST00000510906 ANO3Q9BYT9 981 aa9.82□□□□□ -0.84
PDPN-209ENST00000510906 NKX2-4Q9H2Z4 354 aa9.82□□□□□ -0.84
PDPN-209ENST00000510906 EHMT1Q9H9B1 1298 aa9.82□□□□□ -0.84
PDPN-209ENST00000510906 JADE2Q9NQC1 790 aa9.82□□□□□ -0.84
PDPN-209ENST00000510906 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.82□□□□□ -0.84
PDPN-209ENST00000510906 NID2Q14112 1375 aa9.82□□□□□ -0.84
PDPN-209ENST00000510906 C17orf102A2RUQ5 167 aa9.81□□□□□ -0.84
PDPN-209ENST00000510906 TNFRSF10BO14763 440 aa9.81□□□□□ -0.84
PDPN-209ENST00000510906 ADAMTS3O15072 1205 aa9.81□□□□□ -0.84
PDPN-209ENST00000510906 TREHO43280 583 aa9.81□□□□□ -0.84
PDPN-209ENST00000510906 EPB41L2O43491 1005 aaKnown RBP9.81□□□□□ -0.84
PDPN-209ENST00000510906 NBNO60934 754 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms