RNA–Protein interactions for RNA: ENST00000509994.2

SCARB2-204, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-204ENST00000509994 MARCH6O60337 910 aa11.44□□□□□ -0.58
SCARB2-204ENST00000509994 DEXIO95424 95 aa11.44□□□□□ -0.58
SCARB2-204ENST00000509994 MMP1P03956 469 aa11.44□□□□□ -0.58
SCARB2-204ENST00000509994 OATP04181 439 aa11.44□□□□□ -0.58
SCARB2-204ENST00000509994 NDUFV1P49821 464 aa11.44□□□□□ -0.58
SCARB2-204ENST00000509994 JAK3P52333 1124 aa11.44□□□□□ -0.58
SCARB2-204ENST00000509994 CRYBB1P53674 252 aaPredicted RBP11.44□□□□□ -0.58
SCARB2-204ENST00000509994 TBC1D8BQ0IIM8 1120 aa11.44□□□□□ -0.58
SCARB2-204ENST00000509994 TOB2Q14106 344 aaPredicted RBP11.44□□□□□ -0.58
SCARB2-204ENST00000509994 NTRK3Q16288 839 aa11.44□□□□□ -0.58
SCARB2-204ENST00000509994 TMEM31Q5JXX7 168 aa11.44□□□□□ -0.58
SCARB2-204ENST00000509994 MIER3Q7Z3K6 550 aa11.44□□□□□ -0.58
SCARB2-204ENST00000509994 RTN4RL1Q86UN2 441 aaPredicted RBP11.44□□□□□ -0.58
SCARB2-204ENST00000509994 THNSL1Q8IYQ7 743 aa11.44□□□□□ -0.58
SCARB2-204ENST00000509994 ABI1Q8IZP0 508 aa11.44□□□□□ -0.58
SCARB2-204ENST00000509994 BLIDQ8IZY5 108 aa11.44□□□□□ -0.58
SCARB2-204ENST00000509994 GJD3Q8N144 294 aa11.44□□□□□ -0.58
SCARB2-204ENST00000509994 KLHL23Q8NBE8 558 aa11.44□□□□□ -0.58
SCARB2-204ENST00000509994 NLRP7Q8WX94 980 aa11.44□□□□□ -0.58
SCARB2-204ENST00000509994 CRYGNQ8WXF5 182 aa11.44□□□□□ -0.58
SCARB2-204ENST00000509994 GJA10Q969M2 543 aa11.44□□□□□ -0.58
SCARB2-204ENST00000509994 ZNF689Q96CS4 500 aaPredicted RBP11.44□□□□□ -0.58
SCARB2-204ENST00000509994 AGXT2Q9BYV1 514 aa11.44□□□□□ -0.58
SCARB2-204ENST00000509994 SLKQ9H2G2 1235 aaPredicted RBP11.44□□□□□ -0.58
SCARB2-204ENST00000509994 TMX1Q9H3N1 280 aa11.44□□□□□ -0.58
SCARB2-204ENST00000509994 RC3H2Q9HBD1 1191 aaKnown RBP11.44□□□□□ -0.58
SCARB2-204ENST00000509994 ATP6V0A4Q9HBG4 840 aa11.44□□□□□ -0.58
SCARB2-204ENST00000509994 ZSWIM6Q9HCJ5 1215 aa11.44□□□□□ -0.58
SCARB2-204ENST00000509994 PCDHA4Q9UN74 947 aa11.44□□□□□ -0.58
SCARB2-204ENST00000509994 HCN4Q9Y3Q4 1203 aa11.44□□□□□ -0.58
SCARB2-204ENST00000509994 C5orf42Q9H799 3197 aa11.43□□□□□ -0.58
SCARB2-204ENST00000509994 CCDC194A0A1B0GVG4 234 aa11.43□□□□□ -0.58
SCARB2-204ENST00000509994 GRXCR2A6NFK2 248 aa11.43□□□□□ -0.58
SCARB2-204ENST00000509994 ZBTB42B2RXF5 422 aa11.43□□□□□ -0.58
SCARB2-204ENST00000509994 MGEA5O60502 916 aa11.43□□□□□ -0.58
SCARB2-204ENST00000509994 CDKL5O76039 1030 aa11.43□□□□□ -0.58
SCARB2-204ENST00000509994 TDP2O95551 362 aa11.43□□□□□ -0.58
SCARB2-204ENST00000509994 ITGB1P05556 798 aa11.43□□□□□ -0.58
SCARB2-204ENST00000509994 ZSCAN20P17040 1043 aaPredicted RBP11.43□□□□□ -0.58
SCARB2-204ENST00000509994 XBP1P17861 261 aa11.43□□□□□ -0.58
SCARB2-204ENST00000509994 ATP4AP20648 1035 aa11.43□□□□□ -0.58
SCARB2-204ENST00000509994 SFNP31947 248 aa11.43□□□□□ -0.58
SCARB2-204ENST00000509994 CIITAP33076 1130 aa11.43□□□□□ -0.58
SCARB2-204ENST00000509994 USP11P51784 963 aa11.43□□□□□ -0.58
SCARB2-204ENST00000509994 NLRP11P59045 1033 aaKnown RBP11.43□□□□□ -0.58
SCARB2-204ENST00000509994 HYAL1Q12794 435 aa11.43□□□□□ -0.58
SCARB2-204ENST00000509994 NONOQ15233 471 aaKnown RBP eCLIP11.43□□□□□ -0.58
SCARB2-204ENST00000509994 CSPP1Q1MSJ5 1256 aa11.43□□□□□ -0.58
SCARB2-204ENST00000509994 MTERF2Q49AM1 385 aa11.43□□□□□ -0.58
SCARB2-204ENST00000509994 SLC24A5Q71RS6 500 aa11.43□□□□□ -0.58
SCARB2-204ENST00000509994 RBM23Q86U06 439 aaKnown RBP11.43□□□□□ -0.58
SCARB2-204ENST00000509994 FAM228AQ86W67 206 aa11.43□□□□□ -0.58
SCARB2-204ENST00000509994 FAM178BQ8IXR5 827 aa11.43□□□□□ -0.58
SCARB2-204ENST00000509994 FBXL16Q8N461 479 aa11.43□□□□□ -0.58
SCARB2-204ENST00000509994 POF1BQ8WVV4 589 aa11.43□□□□□ -0.58
SCARB2-204ENST00000509994 TMEM40Q8WWA1 233 aa11.43□□□□□ -0.58
SCARB2-204ENST00000509994 P2RX5Q93086 422 aa11.43□□□□□ -0.58
SCARB2-204ENST00000509994 ZNF274Q96GC6 653 aaPredicted RBP11.43□□□□□ -0.58
SCARB2-204ENST00000509994 RIT2Q99578 217 aa11.43□□□□□ -0.58
SCARB2-204ENST00000509994 UNC45AQ9H3U1 944 aa11.43□□□□□ -0.58
SCARB2-204ENST00000509994 PLAGL2Q9UPG8 496 aa11.43□□□□□ -0.58
SCARB2-204ENST00000509994 FGFR1P11362 822 aa11.42□□□□□ -0.58
SCARB2-204ENST00000509994 CA8P35219 290 aa11.42□□□□□ -0.58
SCARB2-204ENST00000509994 GTF2F1P35269 517 aaKnown RBP eCLIP11.42□□□□□ -0.58
SCARB2-204ENST00000509994 NRIP1P48552 1158 aa11.42□□□□□ -0.58
SCARB2-204ENST00000509994 UGCGQ16739 394 aa11.42□□□□□ -0.58
SCARB2-204ENST00000509994 LETM2Q2VYF4 491 aa11.42□□□□□ -0.58
SCARB2-204ENST00000509994 NAALADL2Q58DX5 795 aa11.42□□□□□ -0.58
SCARB2-204ENST00000509994 KRT25Q7Z3Z0 450 aa11.42□□□□□ -0.58
SCARB2-204ENST00000509994 NEK9Q8TD19 979 aa11.42□□□□□ -0.58
SCARB2-204ENST00000509994 LENG9Q96B70 501 aa11.42□□□□□ -0.58
SCARB2-204ENST00000509994 AIFM3Q96NN9 605 aa11.42□□□□□ -0.58
SCARB2-204ENST00000509994 RGS18Q9NS28 235 aa11.42□□□□□ -0.58
SCARB2-204ENST00000509994 DDX25Q9UHL0 483 aaKnown RBP11.42□□□□□ -0.58
SCARB2-204ENST00000509994 DDX11L8A8MPP1 907 aa11.41□□□□□ -0.58
SCARB2-204ENST00000509994 LINC01565O15544 149 aa11.41□□□□□ -0.58
SCARB2-204ENST00000509994 HOXA2O43364 376 aa11.41□□□□□ -0.58
SCARB2-204ENST00000509994 LINC00271P0C7V0 271 aa11.41□□□□□ -0.58
SCARB2-204ENST00000509994 DNM2P50570 870 aa11.41□□□□□ -0.58
SCARB2-204ENST00000509994 EVCP57679 992 aa11.41□□□□□ -0.58
SCARB2-204ENST00000509994 INF2Q27J81 1249 aa11.41□□□□□ -0.58
SCARB2-204ENST00000509994 FAM102BQ5T8I3 360 aa11.41□□□□□ -0.58
SCARB2-204ENST00000509994 SLC5A5Q92911 643 aa11.41□□□□□ -0.58
SCARB2-204ENST00000509994 POP1Q99575 1024 aaKnown RBP11.41□□□□□ -0.58
SCARB2-204ENST00000509994 TM6SF1Q9BZW5 370 aa11.41□□□□□ -0.58
SCARB2-204ENST00000509994 CD320Q9NPF0 282 aa11.41□□□□□ -0.58
SCARB2-204ENST00000509994 TMEM161AQ9NX61 479 aa11.41□□□□□ -0.58
SCARB2-204ENST00000509994 CD207Q9UJ71 328 aa11.41□□□□□ -0.58
SCARB2-204ENST00000509994 KCNJ14Q9UNX9 436 aa11.41□□□□□ -0.58
SCARB2-204ENST00000509994 C9IYK1 514 aa11.4□□□□□ -0.58
SCARB2-204ENST00000509994 EPB41L2O43491 1005 aaKnown RBP11.4□□□□□ -0.58
SCARB2-204ENST00000509994 ZNF862O60290 1169 aa11.4□□□□□ -0.58
SCARB2-204ENST00000509994 GPR32O75388 356 aa11.4□□□□□ -0.58
SCARB2-204ENST00000509994 FGF18O76093 207 aa11.4□□□□□ -0.58
SCARB2-204ENST00000509994 LAG3P18627 525 aa11.4□□□□□ -0.58
SCARB2-204ENST00000509994 FGFR4P22455 802 aa11.4□□□□□ -0.58
SCARB2-204ENST00000509994 EIF4BP23588 611 aaKnown RBP11.4□□□□□ -0.58
SCARB2-204ENST00000509994 DNAJB1P25685 340 aa11.4□□□□□ -0.58
SCARB2-204ENST00000509994 IRS1P35568 1242 aa11.4□□□□□ -0.58
SCARB2-204ENST00000509994 Q4G0T1 1027 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms