RNA–Protein interactions for RNA: ENST00000509900.5

PTPN20-223, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 693 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-223	ENST00000509900	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	11.21	□□□□□ -0.61
PTPN20-223	ENST00000509900	PHLDB3	Q6NSJ2	640 aa		11.21	□□□□□ -0.61
PTPN20-223	ENST00000509900	RMDN3	Q96TC7	470 aa		11.21	□□□□□ -0.61
PTPN20-223	ENST00000509900	BOLA2	Q9H3K6	86 aa		11.21	□□□□□ -0.61
PTPN20-223	ENST00000509900	BCAS3	Q9H6U6	928 aa		11.21	□□□□□ -0.61
PTPN20-223	ENST00000509900	GPCPD1	Q9NPB8	672 aa		11.21	□□□□□ -0.61
PTPN20-223	ENST00000509900	NGRN	Q9NPE2	291 aa	Known RBP	11.21	□□□□□ -0.61
PTPN20-223	ENST00000509900	PNMA2	Q9UL42	364 aa		11.21	□□□□□ -0.61
PTPN20-223	ENST00000509900	PCDHGA2	Q9Y5H1	932 aa		11.21	□□□□□ -0.61
PTPN20-223	ENST00000509900	LAMA4	Q16363	1823 aa		11.21	□□□□□ -0.62
PTPN20-223	ENST00000509900	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	11.2	□□□□□ -0.62
PTPN20-223	ENST00000509900	C1QTNF9B	B2RNN3	333 aa		11.2	□□□□□ -0.62
PTPN20-223	ENST00000509900	LILRB5	O75023	590 aa		11.2	□□□□□ -0.62
PTPN20-223	ENST00000509900	CLASP2	O75122	1294 aa	Known RBP	11.2	□□□□□ -0.62
PTPN20-223	ENST00000509900	LRRN2	O75325	713 aa		11.2	□□□□□ -0.62
PTPN20-223	ENST00000509900	CT47B1	P0C2W7	299 aa	Predicted RBP	11.2	□□□□□ -0.62
PTPN20-223	ENST00000509900	C1QTNF9	P0C862	333 aa		11.2	□□□□□ -0.62
PTPN20-223	ENST00000509900	EIF2AK2	P19525	551 aa	Known RBP	11.2	□□□□□ -0.62
PTPN20-223	ENST00000509900	UBA1	P22314	1058 aa	Known RBP	11.2	□□□□□ -0.62
PTPN20-223	ENST00000509900	PLCB3	Q01970	1234 aa		11.2	□□□□□ -0.62
PTPN20-223	ENST00000509900	USH1G	Q495M9	461 aa		11.2	□□□□□ -0.62
PTPN20-223	ENST00000509900	LRSAM1	Q6UWE0	723 aa		11.2	□□□□□ -0.62
PTPN20-223	ENST00000509900	OTOP3	Q7RTS5	596 aa		11.2	□□□□□ -0.62
PTPN20-223	ENST00000509900	ZBTB44	Q8NCP5	570 aa		11.2	□□□□□ -0.62
PTPN20-223	ENST00000509900	RSAD2	Q8WXG1	361 aa		11.2	□□□□□ -0.62
PTPN20-223	ENST00000509900	ZNF775	Q96BV0	537 aa	Predicted RBP	11.2	□□□□□ -0.62
PTPN20-223	ENST00000509900	ACSF2	Q96CM8	615 aa	Predicted RBP	11.2	□□□□□ -0.62
PTPN20-223	ENST00000509900	IGSF9	Q9P2J2	1179 aa		11.2	□□□□□ -0.62
PTPN20-223	ENST00000509900	CDY2A	Q9Y6F7	541 aa		11.2	□□□□□ -0.62
PTPN20-223	ENST00000509900	C2orf71	A6NGG8	1288 aa		11.19	□□□□□ -0.62
PTPN20-223	ENST00000509900	TBKBP1	A7MCY6	615 aa		11.19	□□□□□ -0.62
PTPN20-223	ENST00000509900	NR3C2	P08235	984 aa		11.19	□□□□□ -0.62
PTPN20-223	ENST00000509900	NOV	P48745	357 aa		11.19	□□□□□ -0.62
PTPN20-223	ENST00000509900	TDO2	P48775	406 aa		11.19	□□□□□ -0.62
PTPN20-223	ENST00000509900	SPEM2	Q0P670	501 aa		11.19	□□□□□ -0.62
PTPN20-223	ENST00000509900	FOXC1	Q12948	553 aa		11.19	□□□□□ -0.62
PTPN20-223	ENST00000509900	TRIM50	Q86XT4	487 aa		11.19	□□□□□ -0.62
PTPN20-223	ENST00000509900	ERC1	Q8IUD2	1116 aa		11.19	□□□□□ -0.62
PTPN20-223	ENST00000509900	TRMT2A	Q8IZ69	625 aa	Known RBP	11.19	□□□□□ -0.62
PTPN20-223	ENST00000509900	MRPL43	Q8N983	215 aa	Known RBP	11.19	□□□□□ -0.62
PTPN20-223	ENST00000509900	PJA1	Q8NG27	643 aa		11.19	□□□□□ -0.62
PTPN20-223	ENST00000509900	ATRIP	Q8WXE1	791 aa		11.19	□□□□□ -0.62
PTPN20-223	ENST00000509900	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	11.19	□□□□□ -0.62
PTPN20-223	ENST00000509900	CLUAP1	Q96AJ1	413 aa		11.19	□□□□□ -0.62
PTPN20-223	ENST00000509900	FTHL17	Q9BXU8	183 aa		11.19	□□□□□ -0.62
PTPN20-223	ENST00000509900	FOXQ1	Q9C009	403 aa		11.19	□□□□□ -0.62
PTPN20-223	ENST00000509900	CWH43	Q9H720	699 aa		11.19	□□□□□ -0.62
PTPN20-223	ENST00000509900	TYW1	Q9NV66	732 aa	Known RBP	11.19	□□□□□ -0.62
PTPN20-223	ENST00000509900	FBXO4	Q9UKT5	387 aa		11.19	□□□□□ -0.62
PTPN20-223	ENST00000509900	AKAP13	Q12802	2813 aa		11.19	□□□□□ -0.62
PTPN20-223	ENST00000509900	ITPR1	Q14643	2758 aa		11.19	□□□□□ -0.62
PTPN20-223	ENST00000509900	DMXL2	Q8TDJ6	3036 aa		11.19	□□□□□ -0.62
PTPN20-223	ENST00000509900	UNC79	Q9P2D8	2635 aa		11.19	□□□□□ -0.62
PTPN20-223	ENST00000509900	CCDC171	Q6TFL3	1326 aa		11.18	□□□□□ -0.62
PTPN20-223	ENST00000509900	GREB1	Q4ZG55	1949 aa		11.18	□□□□□ -0.62
PTPN20-223	ENST00000509900	N4BP1	O75113	896 aa	Known RBP	11.18	□□□□□ -0.62
PTPN20-223	ENST00000509900	FAM102B	Q5T8I3	360 aa		11.18	□□□□□ -0.62
PTPN20-223	ENST00000509900	ARHGEF16	Q5VV41	709 aa		11.18	□□□□□ -0.62
PTPN20-223	ENST00000509900	TAF2	Q6P1X5	1199 aa		11.18	□□□□□ -0.62
PTPN20-223	ENST00000509900	UNQ6494/PRO21346	Q6UXR6	183 aa		11.18	□□□□□ -0.62
PTPN20-223	ENST00000509900	TMC5	Q6UXY8	1006 aa		11.18	□□□□□ -0.62
PTPN20-223	ENST00000509900	TMC7	Q7Z402	723 aa		11.18	□□□□□ -0.62
PTPN20-223	ENST00000509900	KDF1	Q8NAX2	398 aa	Predicted RBP	11.18	□□□□□ -0.62
PTPN20-223	ENST00000509900	RHPN1	Q8TCX5	695 aa		11.18	□□□□□ -0.62
PTPN20-223	ENST00000509900	GPR152	Q8TDT2	470 aa		11.18	□□□□□ -0.62
PTPN20-223	ENST00000509900	NELL1	Q92832	810 aa		11.18	□□□□□ -0.62
PTPN20-223	ENST00000509900	OSBP2	Q969R2	916 aa		11.18	□□□□□ -0.62
PTPN20-223	ENST00000509900	GPR20	Q99678	358 aa		11.18	□□□□□ -0.62
PTPN20-223	ENST00000509900	TMX1	Q9H3N1	280 aa		11.18	□□□□□ -0.62
PTPN20-223	ENST00000509900	PXMP2	Q9NR77	195 aa		11.18	□□□□□ -0.62
PTPN20-223	ENST00000509900	ARHGEF3	Q9NR81	526 aa		11.18	□□□□□ -0.62
PTPN20-223	ENST00000509900	PUF60	Q9UHX1	559 aa	Known RBP	11.18	□□□□□ -0.62
PTPN20-223	ENST00000509900	LRFN2	Q9ULH4	789 aa		11.18	□□□□□ -0.62
PTPN20-223	ENST00000509900	DOCK6	Q96HP0	2047 aa		11.18	□□□□□ -0.62
PTPN20-223	ENST00000509900	ADAMTS20	P59510	1910 aa		11.17	□□□□□ -0.62
PTPN20-223	ENST00000509900	LOC400499	M0QZD8	3231 aa		11.17	□□□□□ -0.62
PTPN20-223	ENST00000509900	NRCAM	Q92823	1304 aa		11.17	□□□□□ -0.62
PTPN20-223	ENST00000509900	SRF	P11831	508 aa		11.17	□□□□□ -0.62
PTPN20-223	ENST00000509900	EPCAM	P16422	314 aa		11.17	□□□□□ -0.62
PTPN20-223	ENST00000509900	ATP5J	P18859	108 aa		11.17	□□□□□ -0.62
PTPN20-223	ENST00000509900	IBSP	P21815	317 aa	Predicted RBP	11.17	□□□□□ -0.62
PTPN20-223	ENST00000509900	SARS	P49591	514 aa	Known RBP	11.17	□□□□□ -0.62
PTPN20-223	ENST00000509900	CSTF1	Q05048	431 aa	Known RBP	11.17	□□□□□ -0.62
PTPN20-223	ENST00000509900	RING1	Q06587	406 aa		11.17	□□□□□ -0.62
PTPN20-223	ENST00000509900	KCNV1	Q6PIU1	500 aa		11.17	□□□□□ -0.62
PTPN20-223	ENST00000509900	CCDC149	Q6ZUS6	474 aa		11.17	□□□□□ -0.62
PTPN20-223	ENST00000509900	FAM9B	Q8IZU0	186 aa		11.17	□□□□□ -0.62
PTPN20-223	ENST00000509900	TMEM57	Q8N5G2	664 aa		11.17	□□□□□ -0.62
PTPN20-223	ENST00000509900	DNAJB3	Q8WWF6	145 aa		11.17	□□□□□ -0.62
PTPN20-223	ENST00000509900	USP26	Q9BXU7	913 aa		11.17	□□□□□ -0.62
PTPN20-223	ENST00000509900	MAF1	Q9H063	256 aa		11.17	□□□□□ -0.62
PTPN20-223	ENST00000509900	MLXIP	Q9HAP2	919 aa		11.17	□□□□□ -0.62
PTPN20-223	ENST00000509900	DZANK1	Q9NVP4	752 aa		11.17	□□□□□ -0.62
PTPN20-223	ENST00000509900	SPATA6	Q9NWH7	488 aa	Predicted RBP	11.17	□□□□□ -0.62
PTPN20-223	ENST00000509900	ZSCAN32	Q9NX65	697 aa		11.17	□□□□□ -0.62
PTPN20-223	ENST00000509900	GMEB2	Q9UKD1	530 aa		11.17	□□□□□ -0.62
PTPN20-223	ENST00000509900	PADI3	Q9ULW8	664 aa		11.17	□□□□□ -0.62
PTPN20-223	ENST00000509900	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
PTPN20-223	ENST00000509900	FCF1	Q9Y324	198 aa	Known RBP	11.17	□□□□□ -0.62
PTPN20-223	ENST00000509900	WDFY3	Q8IZQ1	3526 aa		11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms