RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 GOLGA8DPQ0D2H9 430 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 TROAPQ12815 778 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 MFSD10Q14728 455 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 CYP26C1Q6V0L0 522 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 INTS8Q75QN2 995 aaKnown RBP5.58□□□□□ -1.52
PHF3-210ENST00000509876 GSTA5Q7RTV2 222 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 PRRT2Q7Z6L0 340 aaPredicted RBP5.58□□□□□ -1.52
PHF3-210ENST00000509876 POLIQ9UNA4 740 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 CLIC2O15247 247 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 EVI5O60447 810 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 GADD45BO75293 160 aaPredicted RBP5.58□□□□□ -1.52
PHF3-210ENST00000509876 PRKAR2AP13861 404 aaKnown RBP5.58□□□□□ -1.52
PHF3-210ENST00000509876 GRK4P32298 578 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 MRPS9P82933 396 aaKnown RBP5.58□□□□□ -1.52
PHF3-210ENST00000509876 KLHL30Q0D2K2 578 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 DCAF4L1Q3SXM0 396 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 Q4G0T1 1027 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 NECAB2Q7Z6G3 386 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 SFR1Q86XK3 245 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 TMEM199Q8N511 208 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.58□□□□□ -1.52
PHF3-210ENST00000509876 TUBE1Q9UJT0 475 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 SPDYE16A6NNV3 312 aaPredicted RBP5.58□□□□□ -1.52
PHF3-210ENST00000509876 SPOPO43791 374 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 PLA2G6O60733 806 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 CIITAP33076 1130 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 NOTUMQ6P988 496 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 RSRC2Q7L4I2 434 aaKnown RBP5.58□□□□□ -1.52
PHF3-210ENST00000509876 SIX6OS1Q8N1H7 587 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 EXOC4Q96A65 974 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 SENP6Q9GZR1 1112 aaPredicted RBP5.58□□□□□ -1.52
PHF3-210ENST00000509876 PRMT7Q9NVM4 692 aaPredicted RBP5.58□□□□□ -1.52
PHF3-210ENST00000509876 TSKSQ9UJT2 592 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 ARFGEF2Q9Y6D5 1785 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 PVALEFA0A1B0GWK0 134 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 MUTP22033 750 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 CDC25AP30304 524 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 FANCCQ00597 558 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 FKBP3Q00688 224 aaKnown RBP5.58□□□□□ -1.52
PHF3-210ENST00000509876 LRRC63Q05C16 580 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 SEC23AQ15436 765 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 EXOC3L4Q17RC7 722 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 ZNF667Q5HYK9 610 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 CFAP58Q5T655 872 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 MSL3Q8N5Y2 521 aaKnown RBP5.58□□□□□ -1.52
PHF3-210ENST00000509876 EPSTI1Q96J88 318 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 TSNARE1Q96NA8 513 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 IL17RBQ9NRM6 502 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 ABCA3Q99758 1704 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 CARNS1A5YM72 827 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 SFI1A8K8P3 1242 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 TADA2AO75478 443 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 CKAP4Q07065 602 aaKnown RBP5.58□□□□□ -1.52
PHF3-210ENST00000509876 SPATA1Q5VX52 437 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 SLC30A10Q6XR72 485 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 UBL4BQ8N7F7 174 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 PDCD2LQ9BRP1 358 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 NXF1Q9UBU9 619 aaKnown RBP5.58□□□□□ -1.52
PHF3-210ENST00000509876 C4AP0C0L4 1744 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 PLCB3Q01970 1234 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 VEPH1Q14D04 833 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 PDZD4Q76G19 769 aaPredicted RBP5.58□□□□□ -1.52
PHF3-210ENST00000509876 NIPA1Q7RTP0 329 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 OTUD6BQ8N6M0 293 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 OR6B3Q8NGW1 331 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 AFG1LQ8WV93 481 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 CNOT6LQ96LI5 555 aaKnown RBP5.58□□□□□ -1.52
PHF3-210ENST00000509876 UNC45AQ9H3U1 944 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 AGO4Q9HCK5 861 aaKnown RBP5.58□□□□□ -1.52
PHF3-210ENST00000509876 CTTNBP2NLQ9P2B4 639 aa5.58□□□□□ -1.52
PHF3-210ENST00000509876 THAP12O43422 761 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 PSEN2P49810 448 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 MXI1P50539 228 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 PTGISQ16647 500 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 GPD1LQ8N335 351 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 XXYLT1Q8NBI6 393 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 TMEM143Q96AN5 459 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 TRIM11Q96F44 468 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 POLR3CQ9BUI4 534 aaPredicted RBP5.57□□□□□ -1.52
PHF3-210ENST00000509876 SLITRK6Q9H5Y7 841 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 LRRC4Q9HBW1 653 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 RWDD2AQ9UIY3 292 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 MTUS1Q9ULD2 1270 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 PLS3P13797 630 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 EEF1GP26641 437 aaKnown RBP5.57□□□□□ -1.52
PHF3-210ENST00000509876 ERCC5P28715 1186 aaPredicted RBP5.57□□□□□ -1.52
PHF3-210ENST00000509876 FLT3LGP49771 235 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 TMEM62Q0P6H9 643 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 COASYQ13057 564 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 RASAL3Q86YV0 1011 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 CCDC97Q96F63 343 aaPredicted RBP5.57□□□□□ -1.52
PHF3-210ENST00000509876 KIF12Q96FN5 646 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 IFT122Q9HBG6 1241 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 SENP2Q9HC62 589 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.57□□□□□ -1.52
PHF3-210ENST00000509876 COL18A1P39060 1754 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 THSD7AQ9UPZ6 1657 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 GOLGA8IPA6NC78 632 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 GOLGA8JA6NMD2 632 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 STK25O00506 426 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms