RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 MAP7D2Q96T17 732 aa17.38■□□□□ 0.37
TPM3-219ENST00000509409 UPF3BQ9BZI7 483 aaKnown RBP17.38■□□□□ 0.37
TPM3-219ENST00000509409 CD320Q9NPF0 282 aa17.38■□□□□ 0.37
TPM3-219ENST00000509409 RGS18Q9NS28 235 aa17.38■□□□□ 0.37
TPM3-219ENST00000509409 PDRG1Q9NUG6 133 aa17.38■□□□□ 0.37
TPM3-219ENST00000509409 PCDHA4Q9UN74 947 aa17.38■□□□□ 0.37
TPM3-219ENST00000509409 BDP1A6H8Y1 2624 aa17.38■□□□□ 0.37
TPM3-219ENST00000509409 COL4A6Q14031 1691 aa17.37■□□□□ 0.37
TPM3-219ENST00000509409 GPR32O75388 356 aa17.37■□□□□ 0.37
TPM3-219ENST00000509409 DEXIO95424 95 aa17.37■□□□□ 0.37
TPM3-219ENST00000509409 MMP1P03956 469 aa17.37■□□□□ 0.37
TPM3-219ENST00000509409 OATP04181 439 aa17.37■□□□□ 0.37
TPM3-219ENST00000509409 ITGB1P05556 798 aa17.37■□□□□ 0.37
TPM3-219ENST00000509409 NLRP11P59045 1033 aaKnown RBP17.37■□□□□ 0.37
TPM3-219ENST00000509409 HYAL1Q12794 435 aa17.37■□□□□ 0.37
TPM3-219ENST00000509409 CLUL1Q15846 466 aa17.37■□□□□ 0.37
TPM3-219ENST00000509409 TMEM31Q5JXX7 168 aa17.37■□□□□ 0.37
TPM3-219ENST00000509409 FAM228AQ86W67 206 aa17.37■□□□□ 0.37
TPM3-219ENST00000509409 BLIDQ8IZY5 108 aa17.37■□□□□ 0.37
TPM3-219ENST00000509409 LRRC71Q8N4P6 559 aa17.37■□□□□ 0.37
TPM3-219ENST00000509409 SPPL3Q8TCT6 385 aa17.37■□□□□ 0.37
TPM3-219ENST00000509409 POF1BQ8WVV4 589 aa17.37■□□□□ 0.37
TPM3-219ENST00000509409 KHSRPQ92945 711 aaKnown RBP eCLIP17.37■□□□□ 0.37
TPM3-219ENST00000509409 GJA10Q969M2 543 aa17.37■□□□□ 0.37
TPM3-219ENST00000509409 RIT2Q99578 217 aa17.37■□□□□ 0.37
TPM3-219ENST00000509409 TM6SF1Q9BZW5 370 aa17.37■□□□□ 0.37
TPM3-219ENST00000509409 UNC45AQ9H3U1 944 aa17.37■□□□□ 0.37
TPM3-219ENST00000509409 ATP6V0A4Q9HBG4 840 aa17.37■□□□□ 0.37
TPM3-219ENST00000509409 AAASQ9NRG9 546 aa17.37■□□□□ 0.37
TPM3-219ENST00000509409 PCDHB12Q9Y5F1 795 aa17.37■□□□□ 0.37
TPM3-219ENST00000509409 TTC3P53804 2025 aa17.37■□□□□ 0.37
TPM3-219ENST00000509409 EDIL3O43854 480 aa17.36■□□□□ 0.37
TPM3-219ENST00000509409 ZSCAN20P17040 1043 aaPredicted RBP17.36■□□□□ 0.37
TPM3-219ENST00000509409 SFNP31947 248 aa17.36■□□□□ 0.37
TPM3-219ENST00000509409 GTF2F1P35269 517 aaKnown RBP eCLIP17.36■□□□□ 0.37
TPM3-219ENST00000509409 JAK3P52333 1124 aa17.36■□□□□ 0.37
TPM3-219ENST00000509409 FAM102BQ5T8I3 360 aa17.36■□□□□ 0.37
TPM3-219ENST00000509409 MIER3Q7Z3K6 550 aa17.36■□□□□ 0.37
TPM3-219ENST00000509409 MICAL1Q8TDZ2 1067 aa17.36■□□□□ 0.37
TPM3-219ENST00000509409 SLC5A5Q92911 643 aa17.36■□□□□ 0.37
TPM3-219ENST00000509409 ZNF668Q96K58 619 aaPredicted RBP17.36■□□□□ 0.37
TPM3-219ENST00000509409 SCLT1Q96NL6 688 aa17.36■□□□□ 0.37
TPM3-219ENST00000509409 BRWD1Q9NSI6 2320 aa17.35■□□□□ 0.37
TPM3-219ENST00000509409 C9IYK1 514 aa17.35■□□□□ 0.37
TPM3-219ENST00000509409 ZNF862O60290 1169 aa17.35■□□□□ 0.37
TPM3-219ENST00000509409 DNAJB1P25685 340 aa17.35■□□□□ 0.37
TPM3-219ENST00000509409 PRKCEQ02156 737 aa17.35■□□□□ 0.37
TPM3-219ENST00000509409 Q4G0T1 1027 aa17.35■□□□□ 0.37
TPM3-219ENST00000509409 LRFN3Q9BTN0 628 aa17.35■□□□□ 0.37
TPM3-219ENST00000509409 PI4K2BG5E9Z4 385 aa17.34■□□□□ 0.37
TPM3-219ENST00000509409 TDP2O95551 362 aa17.34■□□□□ 0.37
TPM3-219ENST00000509409 LTBRP36941 435 aa17.34■□□□□ 0.37
TPM3-219ENST00000509409 FAM189BP81408 668 aa17.34■□□□□ 0.37
TPM3-219ENST00000509409 TBC1D8BQ0IIM8 1120 aa17.34■□□□□ 0.37
TPM3-219ENST00000509409 CAMK1Q14012 370 aa17.34■□□□□ 0.37
TPM3-219ENST00000509409 COL19A1Q14993 1142 aa17.34■□□□□ 0.37
TPM3-219ENST00000509409 UGCGQ16739 394 aa17.34■□□□□ 0.37
TPM3-219ENST00000509409 CTC1Q2NKJ3 1217 aa17.34■□□□□ 0.37
TPM3-219ENST00000509409 GALNT17Q6IS24 598 aa17.34■□□□□ 0.37
TPM3-219ENST00000509409 RBM23Q86U06 439 aaKnown RBP17.34■□□□□ 0.37
TPM3-219ENST00000509409 ZNF710Q8N1W2 664 aa17.34■□□□□ 0.37
TPM3-219ENST00000509409 AIFM3Q96NN9 605 aa17.34■□□□□ 0.37
TPM3-219ENST00000509409 ADAMTS10Q9H324 1103 aa17.34■□□□□ 0.37
TPM3-219ENST00000509409 TYW1Q9NV66 732 aaKnown RBP17.34■□□□□ 0.37
TPM3-219ENST00000509409 TMEM161AQ9NX61 479 aa17.34■□□□□ 0.37
TPM3-219ENST00000509409 CYP3A7-CYP3A51PA0A087WV96 503 aa17.33■□□□□ 0.36
TPM3-219ENST00000509409 FAM86C2PA6NEL3 165 aa17.33■□□□□ 0.36
TPM3-219ENST00000509409 LINC01565O15544 149 aa17.33■□□□□ 0.36
TPM3-219ENST00000509409 CDKL5O76039 1030 aa17.33■□□□□ 0.36
TPM3-219ENST00000509409 FGFR1P11362 822 aa17.33■□□□□ 0.36
TPM3-219ENST00000509409 EIF4BP23588 611 aaKnown RBP17.33■□□□□ 0.36
TPM3-219ENST00000509409 CYP3A7P24462 503 aa17.33■□□□□ 0.36
TPM3-219ENST00000509409 IRS1P35568 1242 aa17.33■□□□□ 0.36
TPM3-219ENST00000509409 NDUFV1P49821 464 aa17.33■□□□□ 0.36
TPM3-219ENST00000509409 DLX2Q07687 328 aaPredicted RBP17.33■□□□□ 0.36
TPM3-219ENST00000509409 ADAM15Q13444 863 aa17.33■□□□□ 0.36
TPM3-219ENST00000509409 NONOQ15233 471 aaKnown RBP eCLIP17.33■□□□□ 0.361e-7■■■■□ 26.2
TPM3-219ENST00000509409 MTERF2Q49AM1 385 aa17.33■□□□□ 0.36
TPM3-219ENST00000509409 THNSL1Q8IYQ7 743 aa17.33■□□□□ 0.36
TPM3-219ENST00000509409 RDM1Q8NG50 284 aa17.33■□□□□ 0.36
TPM3-219ENST00000509409 NLRP7Q8WX94 980 aa17.33■□□□□ 0.36
TPM3-219ENST00000509409 SLKQ9H2G2 1235 aaPredicted RBP17.33■□□□□ 0.36
TPM3-219ENST00000509409 ELAC1Q9H777 363 aaKnown RBP17.33■□□□□ 0.36
TPM3-219ENST00000509409 SEPT9Q9UHD8 586 aaPredicted RBP17.33■□□□□ 0.36
TPM3-219ENST00000509409 KCNJ14Q9UNX9 436 aa17.33■□□□□ 0.36
TPM3-219ENST00000509409 MYO7AQ13402 2215 aa17.33■□□□□ 0.36
TPM3-219ENST00000509409 DDX11L8A8MPP1 907 aa17.32■□□□□ 0.36
TPM3-219ENST00000509409 GPR37L1O60883 481 aa17.32■□□□□ 0.36
TPM3-219ENST00000509409 PSMD10O75832 226 aa17.32■□□□□ 0.36
TPM3-219ENST00000509409 ALADP13716 330 aa17.32■□□□□ 0.36
TPM3-219ENST00000509409 XBP1P17861 261 aa17.32■□□□□ 0.36
TPM3-219ENST00000509409 NRIP1P48552 1158 aa17.32■□□□□ 0.36
TPM3-219ENST00000509409 DNM2P50570 870 aa17.32■□□□□ 0.36
TPM3-219ENST00000509409 C1QBPQ07021 282 aaKnown RBP17.32■□□□□ 0.36
TPM3-219ENST00000509409 DSC3Q14574 896 aa17.32■□□□□ 0.36
TPM3-219ENST00000509409 INF2Q27J81 1249 aa17.32■□□□□ 0.36
TPM3-219ENST00000509409 KRT25Q7Z3Z0 450 aa17.32■□□□□ 0.36
TPM3-219ENST00000509409 ADGRD2Q7Z7M1 963 aa17.32■□□□□ 0.36
TPM3-219ENST00000509409 ABI1Q8IZP0 508 aa17.32■□□□□ 0.36
TPM3-219ENST00000509409 LINC01465Q8N7H1 131 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms