RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 UPP2O95045 317 aa18.1■□□□□ 0.49
PDLIM5-212ENST00000509333 MCM7P33993 719 aa18.1■□□□□ 0.49
PDLIM5-212ENST00000509333 TRAPPC10P48553 1259 aa18.1■□□□□ 0.49
PDLIM5-212ENST00000509333 NPEPPSP55786 919 aa18.1■□□□□ 0.49
PDLIM5-212ENST00000509333 NLRP11P59045 1033 aaKnown RBP18.1■□□□□ 0.49
PDLIM5-212ENST00000509333 TBC1D8BQ0IIM8 1120 aa18.1■□□□□ 0.49
PDLIM5-212ENST00000509333 DRP2Q13474 957 aa18.1■□□□□ 0.49
PDLIM5-212ENST00000509333 KIZQ2M2Z5 673 aa18.1■□□□□ 0.49
PDLIM5-212ENST00000509333 TMEM266Q2M3C6 531 aa18.1■□□□□ 0.49
PDLIM5-212ENST00000509333 MTERF2Q49AM1 385 aa18.1■□□□□ 0.49
PDLIM5-212ENST00000509333 NCAPH2Q6IBW4 605 aa18.1■□□□□ 0.49
PDLIM5-212ENST00000509333 FAM43BQ6ZT52 329 aaPredicted RBP18.1■□□□□ 0.49
PDLIM5-212ENST00000509333 CRIPAKQ8N1N5 446 aa18.1■□□□□ 0.49
PDLIM5-212ENST00000509333 ZNF710Q8N1W2 664 aa18.1■□□□□ 0.49
PDLIM5-212ENST00000509333 DYDC2Q96IM9 177 aa18.1■□□□□ 0.49
PDLIM5-212ENST00000509333 FTHL17Q9BXU8 183 aa18.1■□□□□ 0.49
PDLIM5-212ENST00000509333 ZSWIM4Q9H7M6 989 aa18.1■□□□□ 0.49
PDLIM5-212ENST00000509333 CERS4Q9HA82 394 aa18.1■□□□□ 0.49
PDLIM5-212ENST00000509333 ERVK-5Q9HDB9 667 aa18.1■□□□□ 0.49
PDLIM5-212ENST00000509333 SEPT9Q9UHD8 586 aaPredicted RBP18.1■□□□□ 0.49
PDLIM5-212ENST00000509333 ST3GAL5Q9UNP4 418 aa18.1■□□□□ 0.49
PDLIM5-212ENST00000509333 GINS2Q9Y248 185 aa18.1■□□□□ 0.49
PDLIM5-212ENST00000509333 RFXAPO00287 272 aa18.09■□□□□ 0.49
PDLIM5-212ENST00000509333 RPS6KA5O75582 802 aa18.09■□□□□ 0.49
PDLIM5-212ENST00000509333 FOSL2P15408 326 aa18.09■□□□□ 0.49
PDLIM5-212ENST00000509333 GJB2P29033 226 aa18.09■□□□□ 0.49
PDLIM5-212ENST00000509333 NFX1Q12986 1120 aaKnown RBP18.09■□□□□ 0.49
PDLIM5-212ENST00000509333 CTTNQ14247 550 aaKnown RBP18.09■□□□□ 0.49
PDLIM5-212ENST00000509333 SPRED2Q7Z698 418 aa18.09■□□□□ 0.49
PDLIM5-212ENST00000509333 TPH2Q8IWU9 490 aa18.09■□□□□ 0.49
PDLIM5-212ENST00000509333 LINC01599Q8WXQ3 324 aa18.09■□□□□ 0.49
PDLIM5-212ENST00000509333 EIF2AK1Q9BQI3 630 aaKnown RBP18.09■□□□□ 0.49
PDLIM5-212ENST00000509333 TSPYL2Q9H2G4 693 aaPredicted RBP18.09■□□□□ 0.49
PDLIM5-212ENST00000509333 CYP26B1Q9NR63 512 aa18.09■□□□□ 0.49
PDLIM5-212ENST00000509333 GBF1Q92538 1859 aa18.09■□□□□ 0.49
PDLIM5-212ENST00000509333 CHD7Q9P2D1 2997 aa18.09■□□□□ 0.49
PDLIM5-212ENST00000509333 TTC3P53804 2025 aa18.08■□□□□ 0.49
PDLIM5-212ENST00000509333 PTPRSQ13332 1948 aa18.08■□□□□ 0.49
PDLIM5-212ENST00000509333 CDH23Q9H251 3354 aa18.08■□□□□ 0.48
PDLIM5-212ENST00000509333 EPOPA6NHQ4 379 aa18.08■□□□□ 0.48
PDLIM5-212ENST00000509333 LYPLA2O95372 231 aa18.08■□□□□ 0.48
PDLIM5-212ENST00000509333 EIF4BP23588 611 aaKnown RBP18.08■□□□□ 0.48
PDLIM5-212ENST00000509333 ERVK-21P61565 698 aa18.08■□□□□ 0.48
PDLIM5-212ENST00000509333 CDC42EP1Q00587 391 aa18.08■□□□□ 0.48
PDLIM5-212ENST00000509333 PAK2Q13177 524 aa18.08■□□□□ 0.48
PDLIM5-212ENST00000509333 ORC2Q13416 577 aaPredicted RBP18.08■□□□□ 0.48
PDLIM5-212ENST00000509333 CUL4AQ13619 759 aa18.08■□□□□ 0.48
PDLIM5-212ENST00000509333 SP7Q8TDD2 431 aaPredicted RBP18.08■□□□□ 0.48
PDLIM5-212ENST00000509333 MAP7D2Q96T17 732 aa18.08■□□□□ 0.48
PDLIM5-212ENST00000509333 PPP1R16BQ96T49 567 aa18.08■□□□□ 0.48
PDLIM5-212ENST00000509333 OSMRQ99650 979 aa18.08■□□□□ 0.48
PDLIM5-212ENST00000509333 LXNQ9BS40 222 aa18.08■□□□□ 0.48
PDLIM5-212ENST00000509333 AKT3Q9Y243 479 aa18.08■□□□□ 0.48
PDLIM5-212ENST00000509333 KIF3AQ9Y496 699 aa18.08■□□□□ 0.48
PDLIM5-212ENST00000509333 MICAL3Q7RTP6 2002 aa18.07■□□□□ 0.48
PDLIM5-212ENST00000509333 LINC01553A4QN01 128 aa18.07■□□□□ 0.48
PDLIM5-212ENST00000509333 GPR182O15218 404 aa18.07■□□□□ 0.48
PDLIM5-212ENST00000509333 XRCC6P12956 609 aaKnown RBP eCLIP18.07■□□□□ 0.48
PDLIM5-212ENST00000509333 POU3F3P20264 500 aaPredicted RBP18.07■□□□□ 0.48
PDLIM5-212ENST00000509333 GPC3P51654 580 aa18.07■□□□□ 0.48
PDLIM5-212ENST00000509333 FAM189BP81408 668 aa18.07■□□□□ 0.48
PDLIM5-212ENST00000509333 GNL2Q13823 731 aaKnown RBP18.07■□□□□ 0.48
PDLIM5-212ENST00000509333 TTC38Q5R3I4 469 aa18.07■□□□□ 0.48
PDLIM5-212ENST00000509333 PLA2G4FQ68DD2 849 aa18.07■□□□□ 0.48
PDLIM5-212ENST00000509333 OTUD6AQ7L8S5 288 aa18.07■□□□□ 0.48
PDLIM5-212ENST00000509333 CEP170P1Q96L14 293 aa18.07■□□□□ 0.48
PDLIM5-212ENST00000509333 DHX33Q9H6R0 707 aaKnown RBP18.07■□□□□ 0.48
PDLIM5-212ENST00000509333 SUCLA2Q9P2R7 463 aaPredicted RBP18.07■□□□□ 0.48
PDLIM5-212ENST00000509333 SMC3Q9UQE7 1217 aa18.07■□□□□ 0.48
PDLIM5-212ENST00000509333 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.07■□□□□ 0.48
PDLIM5-212ENST00000509333 A0A087WWV3 80 aa18.06■□□□□ 0.48
PDLIM5-212ENST00000509333 MGEA5O60502 916 aa18.06■□□□□ 0.48
PDLIM5-212ENST00000509333 SPATA31C1P0DKV0 1188 aa18.06■□□□□ 0.48
PDLIM5-212ENST00000509333 YWHABP31946 246 aaKnown RBP18.06■□□□□ 0.48
PDLIM5-212ENST00000509333 TECP42680 631 aa18.06■□□□□ 0.48
PDLIM5-212ENST00000509333 DNM2P50570 870 aa18.06■□□□□ 0.48
PDLIM5-212ENST00000509333 CYP4A11Q02928 519 aa18.06■□□□□ 0.48
PDLIM5-212ENST00000509333 ODR4Q5SWX8 454 aa18.06■□□□□ 0.48
PDLIM5-212ENST00000509333 FAM228AQ86W67 206 aa18.06■□□□□ 0.48
PDLIM5-212ENST00000509333 ARNTL2Q8WYA1 636 aa18.06■□□□□ 0.48
PDLIM5-212ENST00000509333 ZNF668Q96K58 619 aaPredicted RBP18.06■□□□□ 0.48
PDLIM5-212ENST00000509333 GAS2L1Q99501 681 aaPredicted RBP18.06■□□□□ 0.48
PDLIM5-212ENST00000509333 RGS18Q9NS28 235 aa18.06■□□□□ 0.48
PDLIM5-212ENST00000509333 PPME1Q9Y570 386 aa18.06■□□□□ 0.48
PDLIM5-212ENST00000509333 LOXHD1Q8IVV2 1947 aa18.06■□□□□ 0.48
PDLIM5-212ENST00000509333 LPXNO60711 386 aa18.05■□□□□ 0.48
PDLIM5-212ENST00000509333 DGKIO75912 1065 aa18.05■□□□□ 0.48
PDLIM5-212ENST00000509333 DSC3Q14574 896 aa18.05■□□□□ 0.48
PDLIM5-212ENST00000509333 NBR1Q14596 966 aa18.05■□□□□ 0.48
PDLIM5-212ENST00000509333 XKR9Q5GH70 373 aa18.05■□□□□ 0.48
PDLIM5-212ENST00000509333 LARP1BQ659C4 914 aaKnown RBP18.05■□□□□ 0.48
PDLIM5-212ENST00000509333 CATSPER3Q86XQ3 398 aa18.05■□□□□ 0.48
PDLIM5-212ENST00000509333 EXOC8Q8IYI6 725 aa18.05■□□□□ 0.48
PDLIM5-212ENST00000509333 MAFAQ8NHW3 353 aaPredicted RBP18.05■□□□□ 0.48
PDLIM5-212ENST00000509333 ZNF689Q96CS4 500 aaPredicted RBP18.05■□□□□ 0.48
PDLIM5-212ENST00000509333 TGS1Q96RS0 853 aaKnown RBP18.05■□□□□ 0.48
PDLIM5-212ENST00000509333 ADAM2Q99965 735 aa18.05■□□□□ 0.48
PDLIM5-212ENST00000509333 JPH2Q9BR39 696 aaPredicted RBP18.05■□□□□ 0.48
PDLIM5-212ENST00000509333 ANKEF1Q9NU02 776 aa18.05■□□□□ 0.48
PDLIM5-212ENST00000509333 NOL7Q9UMY1 257 aaKnown RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms