RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 FTOQ9C0B1 505 aaKnown RBP eCLIP8.15□□□□□ -1.1
TOPBP1-207ENST00000509162 PCDHGC3Q9UN70 934 aa8.15□□□□□ -1.1
TOPBP1-207ENST00000509162 MAFBQ9Y5Q3 323 aaPredicted RBP8.15□□□□□ -1.1
TOPBP1-207ENST00000509162 CCDC194A0A1B0GVG4 234 aa8.14□□□□□ -1.11
TOPBP1-207ENST00000509162 GRXCR1A8MXD5 290 aa8.14□□□□□ -1.11
TOPBP1-207ENST00000509162 DCDC2CA8MYV0 355 aa8.14□□□□□ -1.11
TOPBP1-207ENST00000509162 MAFGO15525 162 aa8.14□□□□□ -1.11
TOPBP1-207ENST00000509162 C22orf31O95567 290 aa8.14□□□□□ -1.11
TOPBP1-207ENST00000509162 CXCL10P02778 98 aa8.14□□□□□ -1.11
TOPBP1-207ENST00000509162 CTSHP09668 335 aa8.14□□□□□ -1.11
TOPBP1-207ENST00000509162 IQCF3P0C7M6 154 aa8.14□□□□□ -1.11
TOPBP1-207ENST00000509162 INSRRP14616 1297 aa8.14□□□□□ -1.11
TOPBP1-207ENST00000509162 RAG1P15918 1043 aa8.14□□□□□ -1.11
TOPBP1-207ENST00000509162 U2AF2P26368 475 aaKnown RBP eCLIP8.14□□□□□ -1.112e-14■■■■■ 45.6
TOPBP1-207ENST00000509162 ZNF76P36508 570 aa8.14□□□□□ -1.11
TOPBP1-207ENST00000509162 HMGN5P82970 282 aaKnown RBP8.14□□□□□ -1.11
TOPBP1-207ENST00000509162 PRKCEQ02156 737 aa8.14□□□□□ -1.11
TOPBP1-207ENST00000509162 FPGSQ05932 587 aa8.14□□□□□ -1.11
TOPBP1-207ENST00000509162 PPFIA1Q13136 1202 aa8.14□□□□□ -1.11
TOPBP1-207ENST00000509162 PTK7Q13308 1070 aa8.14□□□□□ -1.11
TOPBP1-207ENST00000509162 PPP2R5CQ13362 524 aa8.14□□□□□ -1.11
TOPBP1-207ENST00000509162 DRP2Q13474 957 aa8.14□□□□□ -1.11
TOPBP1-207ENST00000509162 LRCH2Q5VUJ6 765 aa8.14□□□□□ -1.11
TOPBP1-207ENST00000509162 MCTP2Q6DN12 878 aa8.14□□□□□ -1.11
TOPBP1-207ENST00000509162 ZNF746Q6NUN9 644 aaPredicted RBP8.14□□□□□ -1.11
TOPBP1-207ENST00000509162 LRRC8DQ7L1W4 858 aa8.14□□□□□ -1.11
TOPBP1-207ENST00000509162 TMCO2Q7Z6W1 182 aaPredicted RBP8.14□□□□□ -1.11
TOPBP1-207ENST00000509162 NOSTRINQ8IVI9 506 aa8.14□□□□□ -1.11
TOPBP1-207ENST00000509162 TDHQ8IZJ6 230 aa8.14□□□□□ -1.11
TOPBP1-207ENST00000509162 WASF1Q92558 559 aa8.14□□□□□ -1.11
TOPBP1-207ENST00000509162 RIT2Q99578 217 aa8.14□□□□□ -1.11
TOPBP1-207ENST00000509162 SH2D3AQ9BRG2 576 aa8.14□□□□□ -1.11
TOPBP1-207ENST00000509162 SDF4Q9BRK5 362 aa8.14□□□□□ -1.11
TOPBP1-207ENST00000509162 KATNAL1Q9BW62 490 aa8.14□□□□□ -1.11
TOPBP1-207ENST00000509162 UBE2OQ9C0C9 1292 aaKnown RBP8.14□□□□□ -1.11
TOPBP1-207ENST00000509162 UPF2Q9HAU5 1272 aaKnown RBP8.14□□□□□ -1.11
TOPBP1-207ENST00000509162 GABBR1Q9UBS5 961 aa8.14□□□□□ -1.11
TOPBP1-207ENST00000509162 PCDHB6Q9Y5E3 794 aa8.14□□□□□ -1.11
TOPBP1-207ENST00000509162 XIRP2A4UGR9 3374 aa8.13□□□□□ -1.11
TOPBP1-207ENST00000509162 LOXHD1Q8IVV2 1947 aa8.13□□□□□ -1.11
TOPBP1-207ENST00000509162 C17orf102A2RUQ5 167 aa8.13□□□□□ -1.11
TOPBP1-207ENST00000509162 K7ELQ4 463 aaPredicted RBP8.13□□□□□ -1.11
TOPBP1-207ENST00000509162 ZBTB39O15060 712 aa8.13□□□□□ -1.11
TOPBP1-207ENST00000509162 TLR3O15455 904 aaKnown RBP8.13□□□□□ -1.11
TOPBP1-207ENST00000509162 CCNT1O60563 726 aaKnown RBP8.13□□□□□ -1.11
TOPBP1-207ENST00000509162 GAS7O60861 476 aa8.13□□□□□ -1.11
TOPBP1-207ENST00000509162 CHRNA1P02708 482 aa8.13□□□□□ -1.11
TOPBP1-207ENST00000509162 IGBP1P78318 339 aa8.13□□□□□ -1.11
TOPBP1-207ENST00000509162 KRT76Q01546 638 aa8.13□□□□□ -1.11
TOPBP1-207ENST00000509162 RESTQ13127 1097 aa8.13□□□□□ -1.11
TOPBP1-207ENST00000509162 PKP1Q13835 747 aa8.13□□□□□ -1.11
TOPBP1-207ENST00000509162 TARBP2Q15633 366 aaKnown RBP8.13□□□□□ -1.11
TOPBP1-207ENST00000509162 ECM1Q16610 540 aa8.13□□□□□ -1.11
TOPBP1-207ENST00000509162 BRDTQ58F21 947 aaPredicted RBP8.13□□□□□ -1.11
TOPBP1-207ENST00000509162 PLA2G4FQ68DD2 849 aa8.13□□□□□ -1.11
TOPBP1-207ENST00000509162 SWSAP1Q6NVH7 229 aa8.13□□□□□ -1.11
TOPBP1-207ENST00000509162 FAM173BQ6P4H8 233 aa8.13□□□□□ -1.11
TOPBP1-207ENST00000509162 ZNF365Q70YC5 407 aa8.13□□□□□ -1.11
TOPBP1-207ENST00000509162 PLPPR4Q7Z2D5 763 aa8.13□□□□□ -1.11
TOPBP1-207ENST00000509162 C7orf31Q8N865 590 aa8.13□□□□□ -1.11
TOPBP1-207ENST00000509162 GIMAP8Q8ND71 665 aaPredicted RBP8.13□□□□□ -1.11
TOPBP1-207ENST00000509162 ATP8B4Q8TF62 1192 aa8.13□□□□□ -1.11
TOPBP1-207ENST00000509162 TMEM40Q8WWA1 233 aa8.13□□□□□ -1.11
TOPBP1-207ENST00000509162 SNX21Q969T3 373 aa8.13□□□□□ -1.11
TOPBP1-207ENST00000509162 TEKT3Q9BXF9 490 aa8.13□□□□□ -1.11
TOPBP1-207ENST00000509162 FOXP1Q9H334 677 aaPredicted RBP8.13□□□□□ -1.11
TOPBP1-207ENST00000509162 IL23AQ9NPF7 189 aa8.13□□□□□ -1.11
TOPBP1-207ENST00000509162 ZNF302Q9NR11 478 aa8.13□□□□□ -1.11
TOPBP1-207ENST00000509162 DISC1Q9NRI5 854 aa8.13□□□□□ -1.11
TOPBP1-207ENST00000509162 ERAP1Q9NZ08 941 aa8.13□□□□□ -1.11
TOPBP1-207ENST00000509162 TUBE1Q9UJT0 475 aa8.13□□□□□ -1.11
TOPBP1-207ENST00000509162 UNC80Q8N2C7 3258 aa8.13□□□□□ -1.11
TOPBP1-207ENST00000509162 ATG2AQ2TAZ0 1938 aa8.13□□□□□ -1.11
TOPBP1-207ENST00000509162 MYH9P35579 1960 aaKnown RBP8.12□□□□□ -1.11
TOPBP1-207ENST00000509162 A0A087WWV3 80 aa8.12□□□□□ -1.11
TOPBP1-207ENST00000509162 PP2D1A8MPX8 630 aa8.12□□□□□ -1.11
TOPBP1-207ENST00000509162 WDR64B1ANS9 1081 aa8.12□□□□□ -1.11
TOPBP1-207ENST00000509162 NEMFO60524 1076 aa8.12□□□□□ -1.11
TOPBP1-207ENST00000509162 NR1I2O75469 434 aa8.12□□□□□ -1.11
TOPBP1-207ENST00000509162 SELPP16109 830 aa8.12□□□□□ -1.11
TOPBP1-207ENST00000509162 GCFC2P16383 781 aaKnown RBP8.12□□□□□ -1.11
TOPBP1-207ENST00000509162 STAT5BP51692 787 aa8.12□□□□□ -1.11
TOPBP1-207ENST00000509162 DEFB103AP81534 67 aa8.12□□□□□ -1.11
TOPBP1-207ENST00000509162 GRIN1Q05586 938 aa8.12□□□□□ -1.11
TOPBP1-207ENST00000509162 FAM26DQ5JW98 314 aa8.12□□□□□ -1.11
TOPBP1-207ENST00000509162 TTC38Q5R3I4 469 aa8.12□□□□□ -1.11
TOPBP1-207ENST00000509162 ANO5Q75V66 913 aa8.12□□□□□ -1.11
TOPBP1-207ENST00000509162 DEFB128Q7Z7B8 93 aa8.12□□□□□ -1.11
TOPBP1-207ENST00000509162 SMAP1Q8IYB5 467 aaPredicted RBP8.12□□□□□ -1.11
TOPBP1-207ENST00000509162 RDH13Q8NBN7 331 aa8.12□□□□□ -1.11
TOPBP1-207ENST00000509162 CAGE1Q8TC20 777 aa8.12□□□□□ -1.11
TOPBP1-207ENST00000509162 GLG1Q92896 1179 aa8.12□□□□□ -1.11
TOPBP1-207ENST00000509162 ATP6V0A1Q93050 837 aa8.12□□□□□ -1.11
TOPBP1-207ENST00000509162 CHAMP1Q96JM3 812 aa8.12□□□□□ -1.11
TOPBP1-207ENST00000509162 TTYH1Q9H313 450 aaPredicted RBP8.12□□□□□ -1.11
TOPBP1-207ENST00000509162 SMARCAD1Q9H4L7 1026 aa8.12□□□□□ -1.11
TOPBP1-207ENST00000509162 AGO3Q9H9G7 860 aaKnown RBP8.12□□□□□ -1.11
TOPBP1-207ENST00000509162 TBC1D22BQ9NU19 505 aa8.12□□□□□ -1.11
TOPBP1-207ENST00000509162 RGL1Q9NZL6 768 aa8.12□□□□□ -1.11
TOPBP1-207ENST00000509162 ZNF215Q9UL58 517 aaPredicted RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms