RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 C1orf112Q9NSG2 853 aa11.38□□□□□ -0.59
UBE2D3-227ENST00000508818 FAM50BQ9Y247 325 aa11.38□□□□□ -0.59
UBE2D3-227ENST00000508818 BDP1A6H8Y1 2624 aa11.38□□□□□ -0.59
UBE2D3-227ENST00000508818 COL4A4P53420 1690 aaPredicted RBP11.37□□□□□ -0.59
UBE2D3-227ENST00000508818 ZBTB42B2RXF5 422 aa11.37□□□□□ -0.59
UBE2D3-227ENST00000508818 C5orf67F2Z3F1 127 aa11.37□□□□□ -0.59
UBE2D3-227ENST00000508818 GRM6O15303 877 aa11.37□□□□□ -0.59
UBE2D3-227ENST00000508818 CSPG5O95196 566 aa11.37□□□□□ -0.59
UBE2D3-227ENST00000508818 ZSCAN20P17040 1043 aaPredicted RBP11.37□□□□□ -0.59
UBE2D3-227ENST00000508818 SARSP49591 514 aaKnown RBP11.37□□□□□ -0.59
UBE2D3-227ENST00000508818 CLCN3P51790 818 aa11.37□□□□□ -0.59
UBE2D3-227ENST00000508818 NLRP11P59045 1033 aaKnown RBP11.37□□□□□ -0.59
UBE2D3-227ENST00000508818 PRKCEQ02156 737 aa11.37□□□□□ -0.59
UBE2D3-227ENST00000508818 TBC1D8BQ0IIM8 1120 aa11.37□□□□□ -0.59
UBE2D3-227ENST00000508818 LEXMQ3ZCV2 418 aa11.37□□□□□ -0.59
UBE2D3-227ENST00000508818 Q4G0T1 1027 aa11.37□□□□□ -0.59
UBE2D3-227ENST00000508818 NAALADL2Q58DX5 795 aa11.37□□□□□ -0.59
UBE2D3-227ENST00000508818 ERICH6BQ5W0A0 696 aa11.37□□□□□ -0.59
UBE2D3-227ENST00000508818 SLC24A5Q71RS6 500 aa11.37□□□□□ -0.59
UBE2D3-227ENST00000508818 RDM1Q8NG50 284 aa11.37□□□□□ -0.59
UBE2D3-227ENST00000508818 LINC01599Q8WXQ3 324 aa11.37□□□□□ -0.59
UBE2D3-227ENST00000508818 WASF1Q92558 559 aa11.37□□□□□ -0.59
UBE2D3-227ENST00000508818 CLP1Q92989 425 aaKnown RBP11.37□□□□□ -0.59
UBE2D3-227ENST00000508818 LENG9Q96B70 501 aa11.37□□□□□ -0.59
UBE2D3-227ENST00000508818 TMX1Q9H3N1 280 aa11.37□□□□□ -0.59
UBE2D3-227ENST00000508818 UNC45AQ9H3U1 944 aa11.37□□□□□ -0.59
UBE2D3-227ENST00000508818 ERVK-5Q9HDB9 667 aa11.37□□□□□ -0.59
UBE2D3-227ENST00000508818 ALG13Q9NP73 1137 aaKnown RBP11.37□□□□□ -0.59
UBE2D3-227ENST00000508818 AAASQ9NRG9 546 aa11.37□□□□□ -0.59
UBE2D3-227ENST00000508818 CLDND1Q9NY35 253 aa11.37□□□□□ -0.59
UBE2D3-227ENST00000508818 KCNJ14Q9UNX9 436 aa11.37□□□□□ -0.59
UBE2D3-227ENST00000508818 MRPL42Q9Y6G3 142 aaKnown RBP11.37□□□□□ -0.59
UBE2D3-227ENST00000508818 MYH9P35579 1960 aaKnown RBP11.37□□□□□ -0.59
UBE2D3-227ENST00000508818 TTC3P53804 2025 aa11.36□□□□□ -0.59
UBE2D3-227ENST00000508818 CYP3A7-CYP3A51PA0A087WV96 503 aa11.36□□□□□ -0.59
UBE2D3-227ENST00000508818 DDX11L8A8MPP1 907 aa11.36□□□□□ -0.59
UBE2D3-227ENST00000508818 TDP2O95551 362 aa11.36□□□□□ -0.59
UBE2D3-227ENST00000508818 CYP3A7P24462 503 aa11.36□□□□□ -0.59
UBE2D3-227ENST00000508818 DNM2P50570 870 aa11.36□□□□□ -0.59
UBE2D3-227ENST00000508818 ANAPC15P60006 121 aa11.36□□□□□ -0.59
UBE2D3-227ENST00000508818 CDC42EP1Q00587 391 aa11.36□□□□□ -0.59
UBE2D3-227ENST00000508818 INF2Q27J81 1249 aa11.36□□□□□ -0.59
UBE2D3-227ENST00000508818 LETM2Q2VYF4 491 aa11.36□□□□□ -0.59
UBE2D3-227ENST00000508818 PTCRAQ6ISU1 281 aaPredicted RBP11.36□□□□□ -0.59
UBE2D3-227ENST00000508818 LRRC71Q8N4P6 559 aa11.36□□□□□ -0.59
UBE2D3-227ENST00000508818 DAGLBQ8NCG7 672 aa11.36□□□□□ -0.59
UBE2D3-227ENST00000508818 GJA10Q969M2 543 aa11.36□□□□□ -0.59
UBE2D3-227ENST00000508818 PABPC5Q96DU9 382 aaKnown RBP11.36□□□□□ -0.59
UBE2D3-227ENST00000508818 AIFM3Q96NN9 605 aa11.36□□□□□ -0.59
UBE2D3-227ENST00000508818 C1QTNF1Q9BXJ1 281 aa11.36□□□□□ -0.59
UBE2D3-227ENST00000508818 IGFLR1Q9H665 355 aa11.36□□□□□ -0.59
UBE2D3-227ENST00000508818 RC3H2Q9HBD1 1191 aaKnown RBP11.36□□□□□ -0.59
UBE2D3-227ENST00000508818 ATP6V0A4Q9HBG4 840 aa11.36□□□□□ -0.59
UBE2D3-227ENST00000508818 RGS18Q9NS28 235 aa11.36□□□□□ -0.59
UBE2D3-227ENST00000508818 SEPT9Q9UHD8 586 aaPredicted RBP11.36□□□□□ -0.59
UBE2D3-227ENST00000508818 DDX25Q9UHL0 483 aaKnown RBP11.36□□□□□ -0.59
UBE2D3-227ENST00000508818 PLAGL2Q9UPG8 496 aa11.36□□□□□ -0.59
UBE2D3-227ENST00000508818 PCDHB12Q9Y5F1 795 aa11.36□□□□□ -0.59
UBE2D3-227ENST00000508818 BRWD1Q9NSI6 2320 aa11.35□□□□□ -0.59
UBE2D3-227ENST00000508818 TBKBP1A7MCY6 615 aa11.35□□□□□ -0.59
UBE2D3-227ENST00000508818 H3BQ06 376 aaPredicted RBP11.35□□□□□ -0.59
UBE2D3-227ENST00000508818 ZNF862O60290 1169 aa11.35□□□□□ -0.59
UBE2D3-227ENST00000508818 PFKFB2O60825 505 aa11.35□□□□□ -0.59
UBE2D3-227ENST00000508818 GPR32O75388 356 aa11.35□□□□□ -0.59
UBE2D3-227ENST00000508818 PSMD10O75832 226 aa11.35□□□□□ -0.59
UBE2D3-227ENST00000508818 SSTR3P32745 418 aaPredicted RBP11.35□□□□□ -0.59
UBE2D3-227ENST00000508818 SCRN1Q12765 414 aa11.35□□□□□ -0.59
UBE2D3-227ENST00000508818 MTERF2Q49AM1 385 aa11.35□□□□□ -0.59
UBE2D3-227ENST00000508818 XKR3Q5GH77 459 aa11.35□□□□□ -0.59
UBE2D3-227ENST00000508818 MOXD1Q6UVY6 613 aa11.35□□□□□ -0.59
UBE2D3-227ENST00000508818 ABI1Q8IZP0 508 aa11.35□□□□□ -0.59
UBE2D3-227ENST00000508818 KLHL23Q8NBE8 558 aa11.35□□□□□ -0.59
UBE2D3-227ENST00000508818 MICAL1Q8TDZ2 1067 aa11.35□□□□□ -0.59
UBE2D3-227ENST00000508818 TMEM40Q8WWA1 233 aa11.35□□□□□ -0.59
UBE2D3-227ENST00000508818 NLRP7Q8WX94 980 aa11.35□□□□□ -0.59
UBE2D3-227ENST00000508818 P2RX5Q93086 422 aa11.35□□□□□ -0.59
UBE2D3-227ENST00000508818 MS4A3Q96HJ5 214 aa11.35□□□□□ -0.59
UBE2D3-227ENST00000508818 NAP1L4Q99733 375 aaKnown RBP11.35□□□□□ -0.59
UBE2D3-227ENST00000508818 BRMS1Q9HCU9 246 aa11.35□□□□□ -0.59
UBE2D3-227ENST00000508818 TPCN1Q9ULQ1 816 aa11.35□□□□□ -0.59
UBE2D3-227ENST00000508818 COL4A6Q14031 1691 aa11.35□□□□□ -0.59
UBE2D3-227ENST00000508818 EVPLQ92817 2033 aa11.35□□□□□ -0.59
UBE2D3-227ENST00000508818 HOXA2O43364 376 aa11.34□□□□□ -0.59
UBE2D3-227ENST00000508818 EDIL3O43854 480 aa11.34□□□□□ -0.59
UBE2D3-227ENST00000508818 MGEA5O60502 916 aa11.34□□□□□ -0.59
UBE2D3-227ENST00000508818 CCNT1O60563 726 aaKnown RBP11.34□□□□□ -0.59
UBE2D3-227ENST00000508818 DKC1O60832 514 aaKnown RBP eCLIP11.34□□□□□ -0.59
UBE2D3-227ENST00000508818 BAG4O95429 457 aaKnown RBP11.34□□□□□ -0.59
UBE2D3-227ENST00000508818 MMP1P03956 469 aa11.34□□□□□ -0.59
UBE2D3-227ENST00000508818 EIF4BP23588 611 aaKnown RBP11.34□□□□□ -0.59
UBE2D3-227ENST00000508818 GATMP50440 423 aa11.34□□□□□ -0.59
UBE2D3-227ENST00000508818 UGCGQ16739 394 aa11.34□□□□□ -0.59
UBE2D3-227ENST00000508818 FAM102BQ5T8I3 360 aa11.34□□□□□ -0.59
UBE2D3-227ENST00000508818 NEK8Q86SG6 692 aa11.34□□□□□ -0.59
UBE2D3-227ENST00000508818 FAM228AQ86W67 206 aa11.34□□□□□ -0.59
UBE2D3-227ENST00000508818 CRIPAKQ8N1N5 446 aa11.34□□□□□ -0.59
UBE2D3-227ENST00000508818 RNF169Q8NCN4 708 aa11.34□□□□□ -0.59
UBE2D3-227ENST00000508818 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.34□□□□□ -0.59
UBE2D3-227ENST00000508818 NEK9Q8TD19 979 aa11.34□□□□□ -0.59
UBE2D3-227ENST00000508818 ZNF668Q96K58 619 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms