RNA–Protein interactions for RNA: ENST00000508602.5

PTPN20-219, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-219ENST00000508602 N4BP2L1Q5TBK1 243 aaPredicted RBP11.21□□□□□ -0.61
PTPN20-219ENST00000508602 PHLDB3Q6NSJ2 640 aa11.21□□□□□ -0.61
PTPN20-219ENST00000508602 RMDN3Q96TC7 470 aa11.21□□□□□ -0.61
PTPN20-219ENST00000508602 BOLA2Q9H3K6 86 aa11.21□□□□□ -0.61
PTPN20-219ENST00000508602 BCAS3Q9H6U6 928 aa11.21□□□□□ -0.61
PTPN20-219ENST00000508602 GPCPD1Q9NPB8 672 aa11.21□□□□□ -0.61
PTPN20-219ENST00000508602 NGRNQ9NPE2 291 aaKnown RBP11.21□□□□□ -0.61
PTPN20-219ENST00000508602 PNMA2Q9UL42 364 aa11.21□□□□□ -0.61
PTPN20-219ENST00000508602 PCDHGA2Q9Y5H1 932 aa11.21□□□□□ -0.61
PTPN20-219ENST00000508602 LAMA4Q16363 1823 aa11.21□□□□□ -0.62
PTPN20-219ENST00000508602 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.2□□□□□ -0.62
PTPN20-219ENST00000508602 C1QTNF9BB2RNN3 333 aa11.2□□□□□ -0.62
PTPN20-219ENST00000508602 LILRB5O75023 590 aa11.2□□□□□ -0.62
PTPN20-219ENST00000508602 CLASP2O75122 1294 aaKnown RBP11.2□□□□□ -0.62
PTPN20-219ENST00000508602 LRRN2O75325 713 aa11.2□□□□□ -0.62
PTPN20-219ENST00000508602 CT47B1P0C2W7 299 aaPredicted RBP11.2□□□□□ -0.62
PTPN20-219ENST00000508602 C1QTNF9P0C862 333 aa11.2□□□□□ -0.62
PTPN20-219ENST00000508602 EIF2AK2P19525 551 aaKnown RBP11.2□□□□□ -0.62
PTPN20-219ENST00000508602 UBA1P22314 1058 aaKnown RBP11.2□□□□□ -0.62
PTPN20-219ENST00000508602 PLCB3Q01970 1234 aa11.2□□□□□ -0.62
PTPN20-219ENST00000508602 USH1GQ495M9 461 aa11.2□□□□□ -0.62
PTPN20-219ENST00000508602 LRSAM1Q6UWE0 723 aa11.2□□□□□ -0.62
PTPN20-219ENST00000508602 OTOP3Q7RTS5 596 aa11.2□□□□□ -0.62
PTPN20-219ENST00000508602 ZBTB44Q8NCP5 570 aa11.2□□□□□ -0.62
PTPN20-219ENST00000508602 RSAD2Q8WXG1 361 aa11.2□□□□□ -0.62
PTPN20-219ENST00000508602 ZNF775Q96BV0 537 aaPredicted RBP11.2□□□□□ -0.62
PTPN20-219ENST00000508602 ACSF2Q96CM8 615 aaPredicted RBP11.2□□□□□ -0.62
PTPN20-219ENST00000508602 IGSF9Q9P2J2 1179 aa11.2□□□□□ -0.62
PTPN20-219ENST00000508602 CDY2AQ9Y6F7 541 aa11.2□□□□□ -0.62
PTPN20-219ENST00000508602 C2orf71A6NGG8 1288 aa11.19□□□□□ -0.62
PTPN20-219ENST00000508602 TBKBP1A7MCY6 615 aa11.19□□□□□ -0.62
PTPN20-219ENST00000508602 NR3C2P08235 984 aa11.19□□□□□ -0.62
PTPN20-219ENST00000508602 NOVP48745 357 aa11.19□□□□□ -0.62
PTPN20-219ENST00000508602 TDO2P48775 406 aa11.19□□□□□ -0.62
PTPN20-219ENST00000508602 SPEM2Q0P670 501 aa11.19□□□□□ -0.62
PTPN20-219ENST00000508602 FOXC1Q12948 553 aa11.19□□□□□ -0.62
PTPN20-219ENST00000508602 TRIM50Q86XT4 487 aa11.19□□□□□ -0.62
PTPN20-219ENST00000508602 ERC1Q8IUD2 1116 aa11.19□□□□□ -0.62
PTPN20-219ENST00000508602 TRMT2AQ8IZ69 625 aaKnown RBP11.19□□□□□ -0.62
PTPN20-219ENST00000508602 MRPL43Q8N983 215 aaKnown RBP11.19□□□□□ -0.62
PTPN20-219ENST00000508602 PJA1Q8NG27 643 aa11.19□□□□□ -0.62
PTPN20-219ENST00000508602 ATRIPQ8WXE1 791 aa11.19□□□□□ -0.62
PTPN20-219ENST00000508602 GPKOWQ92917 476 aaPredicted RBP eCLIP11.19□□□□□ -0.62
PTPN20-219ENST00000508602 CLUAP1Q96AJ1 413 aa11.19□□□□□ -0.62
PTPN20-219ENST00000508602 FTHL17Q9BXU8 183 aa11.19□□□□□ -0.62
PTPN20-219ENST00000508602 FOXQ1Q9C009 403 aa11.19□□□□□ -0.62
PTPN20-219ENST00000508602 CWH43Q9H720 699 aa11.19□□□□□ -0.62
PTPN20-219ENST00000508602 TYW1Q9NV66 732 aaKnown RBP11.19□□□□□ -0.62
PTPN20-219ENST00000508602 FBXO4Q9UKT5 387 aa11.19□□□□□ -0.62
PTPN20-219ENST00000508602 AKAP13Q12802 2813 aa11.19□□□□□ -0.62
PTPN20-219ENST00000508602 ITPR1Q14643 2758 aa11.19□□□□□ -0.62
PTPN20-219ENST00000508602 DMXL2Q8TDJ6 3036 aa11.19□□□□□ -0.62
PTPN20-219ENST00000508602 UNC79Q9P2D8 2635 aa11.19□□□□□ -0.62
PTPN20-219ENST00000508602 CCDC171Q6TFL3 1326 aa11.18□□□□□ -0.62
PTPN20-219ENST00000508602 GREB1Q4ZG55 1949 aa11.18□□□□□ -0.62
PTPN20-219ENST00000508602 N4BP1O75113 896 aaKnown RBP11.18□□□□□ -0.62
PTPN20-219ENST00000508602 FAM102BQ5T8I3 360 aa11.18□□□□□ -0.62
PTPN20-219ENST00000508602 ARHGEF16Q5VV41 709 aa11.18□□□□□ -0.62
PTPN20-219ENST00000508602 TAF2Q6P1X5 1199 aa11.18□□□□□ -0.62
PTPN20-219ENST00000508602 UNQ6494/PRO21346Q6UXR6 183 aa11.18□□□□□ -0.62
PTPN20-219ENST00000508602 TMC5Q6UXY8 1006 aa11.18□□□□□ -0.62
PTPN20-219ENST00000508602 TMC7Q7Z402 723 aa11.18□□□□□ -0.62
PTPN20-219ENST00000508602 KDF1Q8NAX2 398 aaPredicted RBP11.18□□□□□ -0.62
PTPN20-219ENST00000508602 RHPN1Q8TCX5 695 aa11.18□□□□□ -0.62
PTPN20-219ENST00000508602 GPR152Q8TDT2 470 aa11.18□□□□□ -0.62
PTPN20-219ENST00000508602 NELL1Q92832 810 aa11.18□□□□□ -0.62
PTPN20-219ENST00000508602 OSBP2Q969R2 916 aa11.18□□□□□ -0.62
PTPN20-219ENST00000508602 GPR20Q99678 358 aa11.18□□□□□ -0.62
PTPN20-219ENST00000508602 TMX1Q9H3N1 280 aa11.18□□□□□ -0.62
PTPN20-219ENST00000508602 PXMP2Q9NR77 195 aa11.18□□□□□ -0.62
PTPN20-219ENST00000508602 ARHGEF3Q9NR81 526 aa11.18□□□□□ -0.62
PTPN20-219ENST00000508602 PUF60Q9UHX1 559 aaKnown RBP11.18□□□□□ -0.62
PTPN20-219ENST00000508602 LRFN2Q9ULH4 789 aa11.18□□□□□ -0.62
PTPN20-219ENST00000508602 DOCK6Q96HP0 2047 aa11.18□□□□□ -0.62
PTPN20-219ENST00000508602 ADAMTS20P59510 1910 aa11.17□□□□□ -0.62
PTPN20-219ENST00000508602 LOC400499M0QZD8 3231 aa11.17□□□□□ -0.62
PTPN20-219ENST00000508602 NRCAMQ92823 1304 aa11.17□□□□□ -0.62
PTPN20-219ENST00000508602 SRFP11831 508 aa11.17□□□□□ -0.62
PTPN20-219ENST00000508602 EPCAMP16422 314 aa11.17□□□□□ -0.62
PTPN20-219ENST00000508602 ATP5JP18859 108 aa11.17□□□□□ -0.62
PTPN20-219ENST00000508602 IBSPP21815 317 aaPredicted RBP11.17□□□□□ -0.62
PTPN20-219ENST00000508602 SARSP49591 514 aaKnown RBP11.17□□□□□ -0.62
PTPN20-219ENST00000508602 CSTF1Q05048 431 aaKnown RBP11.17□□□□□ -0.62
PTPN20-219ENST00000508602 RING1Q06587 406 aa11.17□□□□□ -0.62
PTPN20-219ENST00000508602 KCNV1Q6PIU1 500 aa11.17□□□□□ -0.62
PTPN20-219ENST00000508602 CCDC149Q6ZUS6 474 aa11.17□□□□□ -0.62
PTPN20-219ENST00000508602 FAM9BQ8IZU0 186 aa11.17□□□□□ -0.62
PTPN20-219ENST00000508602 TMEM57Q8N5G2 664 aa11.17□□□□□ -0.62
PTPN20-219ENST00000508602 DNAJB3Q8WWF6 145 aa11.17□□□□□ -0.62
PTPN20-219ENST00000508602 USP26Q9BXU7 913 aa11.17□□□□□ -0.62
PTPN20-219ENST00000508602 MAF1Q9H063 256 aa11.17□□□□□ -0.62
PTPN20-219ENST00000508602 MLXIPQ9HAP2 919 aa11.17□□□□□ -0.62
PTPN20-219ENST00000508602 DZANK1Q9NVP4 752 aa11.17□□□□□ -0.62
PTPN20-219ENST00000508602 SPATA6Q9NWH7 488 aaPredicted RBP11.17□□□□□ -0.62
PTPN20-219ENST00000508602 ZSCAN32Q9NX65 697 aa11.17□□□□□ -0.62
PTPN20-219ENST00000508602 GMEB2Q9UKD1 530 aa11.17□□□□□ -0.62
PTPN20-219ENST00000508602 PADI3Q9ULW8 664 aa11.17□□□□□ -0.62
PTPN20-219ENST00000508602 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.17□□□□□ -0.62
PTPN20-219ENST00000508602 FCF1Q9Y324 198 aaKnown RBP11.17□□□□□ -0.62
PTPN20-219ENST00000508602 WDFY3Q8IZQ1 3526 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms