RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 DAXXQ9UER7 740 aaPredicted RBP16.74■□□□□ 0.27
RNF4-210ENST00000508235 DBR1Q9UK59 544 aaKnown RBP16.74■□□□□ 0.27
RNF4-210ENST00000508235 AKT3Q9Y243 479 aa16.74■□□□□ 0.27
RNF4-210ENST00000508235 SIP14410 1827 aa16.74■□□□□ 0.27
RNF4-210ENST00000508235 ABHD14A-ACY1A0A1B0GW23 586 aa16.73■□□□□ 0.27
RNF4-210ENST00000508235 DGAT1O75907 488 aa16.73■□□□□ 0.27
RNF4-210ENST00000508235 RARRES1P49788 294 aa16.73■□□□□ 0.27
RNF4-210ENST00000508235 NPEPPSP55786 919 aa16.73■□□□□ 0.27
RNF4-210ENST00000508235 IKBKEQ14164 716 aa16.73■□□□□ 0.27
RNF4-210ENST00000508235 MBTPS1Q14703 1052 aa16.73■□□□□ 0.27
RNF4-210ENST00000508235 GPNMBQ14956 572 aa16.73■□□□□ 0.27
RNF4-210ENST00000508235 PTPAQ15257 358 aa16.73■□□□□ 0.27
RNF4-210ENST00000508235 C9orf50Q5SZB4 431 aa16.73■□□□□ 0.27
RNF4-210ENST00000508235 FAM173BQ6P4H8 233 aa16.73■□□□□ 0.27
RNF4-210ENST00000508235 POTEGQ6S5H5 508 aa16.73■□□□□ 0.27
RNF4-210ENST00000508235 LRRC71Q8N4P6 559 aa16.73■□□□□ 0.27
RNF4-210ENST00000508235 LINC01465Q8N7H1 131 aa16.73■□□□□ 0.27
RNF4-210ENST00000508235 TCP11Q8WWU5 503 aa16.73■□□□□ 0.27
RNF4-210ENST00000508235 SH2D3AQ9BRG2 576 aa16.73■□□□□ 0.27
RNF4-210ENST00000508235 DHX33Q9H6R0 707 aaKnown RBP16.73■□□□□ 0.27
RNF4-210ENST00000508235 ATP6V1DQ9Y5K8 247 aa16.73■□□□□ 0.27
RNF4-210ENST00000508235 ANP32AP39687 249 aaKnown RBP16.72■□□□□ 0.27
RNF4-210ENST00000508235 NASPP49321 788 aaPredicted RBP16.72■□□□□ 0.27
RNF4-210ENST00000508235 CRYBB1P53674 252 aaPredicted RBP16.72■□□□□ 0.27
RNF4-210ENST00000508235 CEBPZQ03701 1054 aaKnown RBP16.72■□□□□ 0.27
RNF4-210ENST00000508235 TMEM62Q0P6H9 643 aa16.72■□□□□ 0.27
RNF4-210ENST00000508235 PKP1Q13835 747 aa16.72■□□□□ 0.27
RNF4-210ENST00000508235 SLC39A14Q15043 492 aa16.72■□□□□ 0.27
RNF4-210ENST00000508235 LRIT3Q3SXY7 679 aa16.72■□□□□ 0.27
RNF4-210ENST00000508235 PLEKHG4Q58EX7 1191 aa16.72■□□□□ 0.27
RNF4-210ENST00000508235 HABP4Q5JVS0 413 aaKnown RBP16.72■□□□□ 0.27
RNF4-210ENST00000508235 FOXD4L5Q5VV16 416 aaPredicted RBP16.72■□□□□ 0.27
RNF4-210ENST00000508235 TSHZ1Q6ZSZ6 1077 aa16.72■□□□□ 0.27
RNF4-210ENST00000508235 OTOP2Q7RTS6 562 aa16.72■□□□□ 0.27
RNF4-210ENST00000508235 PIGOQ8TEQ8 1089 aa16.72■□□□□ 0.27
RNF4-210ENST00000508235 FOXD4L4Q8WXT5 416 aaPredicted RBP16.72■□□□□ 0.27
RNF4-210ENST00000508235 CDK5RAP3Q96JB5 506 aa16.72■□□□□ 0.27
RNF4-210ENST00000508235 USP28Q96RU2 1077 aa16.72■□□□□ 0.27
RNF4-210ENST00000508235 MTRQ99707 1265 aa16.72■□□□□ 0.27
RNF4-210ENST00000508235 ATP6V0A4Q9HBG4 840 aa16.72■□□□□ 0.27
RNF4-210ENST00000508235 CFAP45Q9UL16 551 aa16.72■□□□□ 0.27
RNF4-210ENST00000508235 KIAA1024Q9UPX6 916 aa16.72■□□□□ 0.27
RNF4-210ENST00000508235 TET1Q8NFU7 2136 aa16.72■□□□□ 0.27
RNF4-210ENST00000508235 ARHGEF35A5YM69 484 aa16.71■□□□□ 0.27
RNF4-210ENST00000508235 ZBBXA8MT70 800 aa16.71■□□□□ 0.27
RNF4-210ENST00000508235 YEATS4O95619 227 aa16.71■□□□□ 0.27
RNF4-210ENST00000508235 BRD1O95696 1058 aa16.71■□□□□ 0.27
RNF4-210ENST00000508235 VTNP04004 478 aa16.71■□□□□ 0.27
RNF4-210ENST00000508235 GHRP10912 638 aa16.71■□□□□ 0.27
RNF4-210ENST00000508235 UBA7P41226 1012 aa16.71■□□□□ 0.27
RNF4-210ENST00000508235 EMC2Q15006 297 aa16.71■□□□□ 0.27
RNF4-210ENST00000508235 STK38Q15208 465 aa16.71■□□□□ 0.27
RNF4-210ENST00000508235 FBXO47Q5MNV8 452 aa16.71■□□□□ 0.27
RNF4-210ENST00000508235 RASIP1Q5U651 963 aa16.71■□□□□ 0.27
RNF4-210ENST00000508235 PSPC1Q8WXF1 523 aaKnown RBP16.71■□□□□ 0.27
RNF4-210ENST00000508235 VWCEQ96DN2 955 aa16.71■□□□□ 0.27
RNF4-210ENST00000508235 CALML4Q96GE6 196 aa16.71■□□□□ 0.27
RNF4-210ENST00000508235 SCLT1Q96NL6 688 aa16.71■□□□□ 0.27
RNF4-210ENST00000508235 IFIH1Q9BYX4 1025 aaKnown RBP16.71■□□□□ 0.27
RNF4-210ENST00000508235 DDX19AQ9NUU7 478 aaKnown RBP16.71■□□□□ 0.27
RNF4-210ENST00000508235 SUCLA2Q9P2R7 463 aaPredicted RBP16.71■□□□□ 0.27
RNF4-210ENST00000508235 DNM3Q9UQ16 869 aa16.71■□□□□ 0.27
RNF4-210ENST00000508235 GINS2Q9Y248 185 aa16.71■□□□□ 0.27
RNF4-210ENST00000508235 SRPRBQ9Y5M8 271 aaKnown RBP16.71■□□□□ 0.27
RNF4-210ENST00000508235 SLC4A7Q9Y6M7 1214 aa16.71■□□□□ 0.27
RNF4-210ENST00000508235 PP2D1A8MPX8 630 aa16.7■□□□□ 0.26
RNF4-210ENST00000508235 ZBTB39O15060 712 aa16.7■□□□□ 0.26
RNF4-210ENST00000508235 ASAP2O43150 1006 aa16.7■□□□□ 0.26
RNF4-210ENST00000508235 GPR32O75388 356 aa16.7■□□□□ 0.26
RNF4-210ENST00000508235 MARCKSP29966 332 aaPredicted RBP16.7■□□□□ 0.26
RNF4-210ENST00000508235 KCNJ6P48051 423 aa16.7■□□□□ 0.26
RNF4-210ENST00000508235 NLRP11P59045 1033 aaKnown RBP16.7■□□□□ 0.26
RNF4-210ENST00000508235 LPIN1Q14693 890 aa16.7■□□□□ 0.26
RNF4-210ENST00000508235 HYIQ5T013 277 aa16.7■□□□□ 0.26
RNF4-210ENST00000508235 CABP7Q86V35 215 aa16.7■□□□□ 0.26
RNF4-210ENST00000508235 ZNF410Q86VK4 478 aa16.7■□□□□ 0.26
RNF4-210ENST00000508235 KRI1Q8N9T8 703 aaKnown RBP16.7■□□□□ 0.26
RNF4-210ENST00000508235 ZNF579Q8NAF0 562 aaKnown RBP16.7■□□□□ 0.26
RNF4-210ENST00000508235 LINC00301Q8NCQ3 95 aa16.7■□□□□ 0.26
RNF4-210ENST00000508235 MCPH1Q8NEM0 835 aa16.7■□□□□ 0.26
RNF4-210ENST00000508235 DBF4BQ8NFT6 615 aa16.7■□□□□ 0.26
RNF4-210ENST00000508235 NLRP7Q8WX94 980 aa16.7■□□□□ 0.26
RNF4-210ENST00000508235 MMTAG2Q9BU76 263 aaKnown RBP16.7■□□□□ 0.26
RNF4-210ENST00000508235 FBXO2Q9UK22 296 aaPredicted RBP16.7■□□□□ 0.26
RNF4-210ENST00000508235 MICAL3Q7RTP6 2002 aa16.69■□□□□ 0.26
RNF4-210ENST00000508235 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.69■□□□□ 0.26
RNF4-210ENST00000508235 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.69■□□□□ 0.26
RNF4-210ENST00000508235 GPR182O15218 404 aa16.69■□□□□ 0.26
RNF4-210ENST00000508235 SPTLC2O15270 562 aa16.69■□□□□ 0.26
RNF4-210ENST00000508235 PPP6R2O75170 966 aa16.69■□□□□ 0.26
RNF4-210ENST00000508235 EYA4O95677 639 aa16.69■□□□□ 0.26
RNF4-210ENST00000508235 CDC25AP30304 524 aa16.69■□□□□ 0.26
RNF4-210ENST00000508235 TXLNAP40222 546 aa16.69■□□□□ 0.26
RNF4-210ENST00000508235 GPC3P51654 580 aa16.69■□□□□ 0.26
RNF4-210ENST00000508235 NUCB2P80303 420 aa16.69■□□□□ 0.26
RNF4-210ENST00000508235 PAK2Q13177 524 aa16.69■□□□□ 0.26
RNF4-210ENST00000508235 MXD4Q14582 209 aaPredicted RBP16.69■□□□□ 0.26
RNF4-210ENST00000508235 KIZQ2M2Z5 673 aa16.69■□□□□ 0.26
RNF4-210ENST00000508235 RHPN2Q8IUC4 686 aa16.69■□□□□ 0.26
RNF4-210ENST00000508235 RASSF8Q8NHQ8 419 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms