RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 KLHL7Q8IXQ5 586 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 RASGEF1CQ8N431 466 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 KCTD17Q8N5Z5 321 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 PROCA1Q8NCQ7 364 aaPredicted RBP5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 CCDC197Q8NCU1 140 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 TBCKQ8TEA7 893 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 SNX29Q8TEQ0 813 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 SCFD2Q8WU76 684 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 PIK3R5Q8WYR1 880 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 TBC1D5Q92609 795 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 VTI1AQ96AJ9 217 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 ZBTB9Q96C00 473 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 CHMP6Q96FZ7 201 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 RSRC1Q96IZ7 334 aaKnown RBP5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 MTMR9Q96QG7 549 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 SPAG5Q96R06 1193 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 PSMB7Q99436 277 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 PSMD1Q99460 953 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 JPH2Q9BR39 696 aaPredicted RBP5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 MOV10L1Q9BXT6 1211 aaKnown RBP5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 NYXQ9GZU5 481 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 EHD4Q9H223 541 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 TAOK3Q9H2K8 898 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 CENPHQ9H3R5 247 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 VEZTQ9HBM0 779 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 SLC40A1Q9NP59 571 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 BATF3Q9NR55 127 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 PANK4Q9NVE7 773 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 FAM153AQ9UHL3 310 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 MCM8Q9UJA3 840 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 FBXL5Q9UKA1 691 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 TTC7AQ9ULT0 858 aaPredicted RBP5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 MINPP1Q9UNW1 487 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 CEP83Q9Y592 693 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 A0A1B0GUL6 1792 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 PITPNM2Q9BZ72 1349 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 NHSL1Q5SYE7 1610 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 ITGB4P16144 1822 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 GTPBP10A4D1E9 387 aaKnown RBP5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 J3QL48 77 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 MYO1FO00160 1098 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 SNAP23O00161 211 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 CLGNO14967 610 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 AXIN1O15169 862 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 EPHB6O15197 1021 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 SLC16A3O15427 465 aaKnown RBP5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 ASAP2O43150 1006 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 CALUO43852 315 aaPredicted RBP5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 AFPP02771 609 aaKnown RBP5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 KRT18P05783 430 aaKnown RBP5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 LDHBP07195 334 aaKnown RBP5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 H2AFZP0C0S5 128 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 LMNB1P20700 586 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 ELF1P32519 619 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 MMP14P50281 582 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 MRPL12P52815 198 aaKnown RBP5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 SLC8A3P57103 927 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 ADCY2Q08462 1091 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 ZNF844Q08AG5 666 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 KCNMA1Q12791 1236 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 COASYQ13057 564 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 XRCC4Q13426 336 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 RIPK1Q13546 671 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 DHX34Q14147 1143 aaKnown RBP5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 CRYMQ14894 314 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 AGERQ15109 404 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 KRT71Q3SY84 523 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 ZCWPW2Q504Y3 356 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 ANKRD20A8PQ5CZ79 823 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 SLC10A5Q5PT55 438 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 HYIQ5T013 277 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 C6orf118Q5T5N4 469 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 PPP2R2DQ66LE6 453 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 INTS5Q6P9B9 1019 aaKnown RBP5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 CYB5D1Q6P9G0 228 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 BTNL9Q6UXG8 535 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 CRELD2Q6UXH1 353 aaPredicted RBP5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 BICDL1Q6ZP65 573 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 H2AFVQ71UI9 128 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 TAOK1Q7L7X3 1001 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 DYMQ7RTS9 669 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 TMC3Q7Z5M5 1100 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 ZC3H3Q8IXZ2 948 aaKnown RBP5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 CRIPAKQ8N1N5 446 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 ANKRD13CQ8N6S4 541 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 GBP7Q8N8V2 638 aaPredicted RBP5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 NEDD1Q8NHV4 660 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 ERMNQ8TAM6 284 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 UBLCP1Q8WVY7 318 aaPredicted RBP5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 SEC14L1Q92503 715 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 ZKSCAN4Q969J2 545 aaPredicted RBP5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 PGM2Q96G03 612 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 MS4A14Q96JA4 679 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 SEC16BQ96JE7 1060 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 PNMA5Q96PV4 448 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 TMEM47Q9BQJ4 181 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 MMTAG2Q9BU76 263 aaKnown RBP5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 GANQ9H2C0 597 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 RABEP2Q9H5N1 569 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 ATP6V0A4Q9HBG4 840 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms