RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 KIAA0319LQ8IZA0 1049 aa14.31□□□□□ -0.12
TCOF1-210ENST00000506767 SYT2Q8N9I0 419 aaPredicted RBP14.31□□□□□ -0.12
TCOF1-210ENST00000506767 RETREG2Q8NC44 543 aa14.31□□□□□ -0.12
TCOF1-210ENST00000506767 CAGE1Q8TC20 777 aa14.31□□□□□ -0.12
TCOF1-210ENST00000506767 JPH2Q9BR39 696 aaPredicted RBP14.31□□□□□ -0.12
TCOF1-210ENST00000506767 XPNPEP1Q9NQW7 623 aa14.31□□□□□ -0.12
TCOF1-210ENST00000506767 FAM13BQ9NYF5 915 aa14.31□□□□□ -0.12
TCOF1-210ENST00000506767 HPSEQ9Y251 543 aa14.31□□□□□ -0.12
TCOF1-210ENST00000506767 PITPNM1O00562 1244 aa14.3□□□□□ -0.12
TCOF1-210ENST00000506767 GAS2O43903 313 aaKnown RBP14.3□□□□□ -0.12
TCOF1-210ENST00000506767 RPLP2P05387 115 aaKnown RBP14.3□□□□□ -0.12
TCOF1-210ENST00000506767 PLA2G4BP0C869 781 aa14.3□□□□□ -0.12
TCOF1-210ENST00000506767 CKBP12277 381 aa14.3□□□□□ -0.12
TCOF1-210ENST00000506767 ITGB8P26012 769 aa14.3□□□□□ -0.12
TCOF1-210ENST00000506767 POLGP54098 1239 aaPredicted RBP14.3□□□□□ -0.12
TCOF1-210ENST00000506767 SLC12A3P55017 1021 aa14.3□□□□□ -0.12
TCOF1-210ENST00000506767 DRP2Q13474 957 aa14.3□□□□□ -0.12
TCOF1-210ENST00000506767 BFSP2Q13515 415 aa14.3□□□□□ -0.12
TCOF1-210ENST00000506767 EMC2Q15006 297 aa14.3□□□□□ -0.12
TCOF1-210ENST00000506767 CSPP1Q1MSJ5 1256 aa14.3□□□□□ -0.12
TCOF1-210ENST00000506767 RRAGBQ5VZM2 374 aa14.3□□□□□ -0.12
TCOF1-210ENST00000506767 TRAF7Q6Q0C0 670 aa14.3□□□□□ -0.12
TCOF1-210ENST00000506767 PADI6Q6TGC4 694 aa14.3□□□□□ -0.12
TCOF1-210ENST00000506767 CCDC73Q6ZRK6 1079 aa14.3□□□□□ -0.12
TCOF1-210ENST00000506767 NME8Q8N427 588 aa14.3□□□□□ -0.12
TCOF1-210ENST00000506767 LRRC71Q8N4P6 559 aa14.3□□□□□ -0.12
TCOF1-210ENST00000506767 RASSF8Q8NHQ8 419 aa14.3□□□□□ -0.12
TCOF1-210ENST00000506767 DNAJB3Q8WWF6 145 aa14.3□□□□□ -0.12
TCOF1-210ENST00000506767 SLC7A3Q8WY07 619 aa14.3□□□□□ -0.12
TCOF1-210ENST00000506767 RAD54LQ92698 747 aa14.3□□□□□ -0.12
TCOF1-210ENST00000506767 PANK2Q9BZ23 570 aa14.3□□□□□ -0.12
TCOF1-210ENST00000506767 HIPK3Q9H422 1215 aa14.3□□□□□ -0.12
TCOF1-210ENST00000506767 STK17AQ9UEE5 414 aa14.3□□□□□ -0.12
TCOF1-210ENST00000506767 A0A1B0GVL5 298 aa14.29□□□□□ -0.12
TCOF1-210ENST00000506767 ARHGEF35A5YM69 484 aa14.29□□□□□ -0.12
TCOF1-210ENST00000506767 TIMP1P01033 207 aa14.29□□□□□ -0.12
TCOF1-210ENST00000506767 PFKFB1P16118 471 aa14.29□□□□□ -0.12
TCOF1-210ENST00000506767 CYP11B2P19099 503 aa14.29□□□□□ -0.12
TCOF1-210ENST00000506767 TMOD1P28289 359 aa14.29□□□□□ -0.12
TCOF1-210ENST00000506767 CLCN3P51790 818 aa14.29□□□□□ -0.12
TCOF1-210ENST00000506767 MCM6Q14566 821 aa14.29□□□□□ -0.12
TCOF1-210ENST00000506767 HABP4Q5JVS0 413 aaKnown RBP14.29□□□□□ -0.12
TCOF1-210ENST00000506767 FAM26DQ5JW98 314 aa14.29□□□□□ -0.12
TCOF1-210ENST00000506767 ZNF618Q5T7W0 954 aa14.29□□□□□ -0.12
TCOF1-210ENST00000506767 RINT1Q6NUQ1 792 aa14.29□□□□□ -0.12
TCOF1-210ENST00000506767 C1orf186Q6ZWK4 172 aa14.29□□□□□ -0.12
TCOF1-210ENST00000506767 CCDC155Q8N6L0 562 aa14.29□□□□□ -0.12
TCOF1-210ENST00000506767 METTL13Q8N6R0 699 aa14.29□□□□□ -0.12
TCOF1-210ENST00000506767 PDILTQ8N807 584 aa14.29□□□□□ -0.12
TCOF1-210ENST00000506767 LARP4BQ92615 738 aaKnown RBP14.29□□□□□ -0.12
TCOF1-210ENST00000506767 CCDC43Q96MW1 224 aaKnown RBP14.29□□□□□ -0.12
TCOF1-210ENST00000506767 MTRQ99707 1265 aa14.29□□□□□ -0.12
TCOF1-210ENST00000506767 FAM49AQ9H0Q0 323 aaPredicted RBP14.29□□□□□ -0.12
TCOF1-210ENST00000506767 SUGCTQ9HAC7 445 aa14.29□□□□□ -0.12
TCOF1-210ENST00000506767 ATP6V0A4Q9HBG4 840 aa14.29□□□□□ -0.12
TCOF1-210ENST00000506767 PRDM5Q9NQX1 630 aaPredicted RBP14.29□□□□□ -0.12
TCOF1-210ENST00000506767 KCNH3Q9ULD8 1083 aa14.29□□□□□ -0.12
TCOF1-210ENST00000506767 UMODL1Q5DID0 1318 aa14.29□□□□□ -0.12
TCOF1-210ENST00000506767 LTBP2Q14767 1821 aa14.29□□□□□ -0.12
TCOF1-210ENST00000506767 H0YGN5 161 aa14.28□□□□□ -0.12
TCOF1-210ENST00000506767 USO1O60763 962 aaKnown RBP14.28□□□□□ -0.12
TCOF1-210ENST00000506767 SIP14410 1827 aa14.28□□□□□ -0.12
TCOF1-210ENST00000506767 ARL2P36404 184 aa14.28□□□□□ -0.12
TCOF1-210ENST00000506767 THPOP40225 353 aa14.28□□□□□ -0.12
TCOF1-210ENST00000506767 STAT6P42226 847 aa14.28□□□□□ -0.12
TCOF1-210ENST00000506767 MGAT3Q09327 533 aa14.28□□□□□ -0.12
TCOF1-210ENST00000506767 ARSHQ5FYA8 562 aa14.28□□□□□ -0.12
TCOF1-210ENST00000506767 IER5Q5VY09 327 aa14.28□□□□□ -0.12
TCOF1-210ENST00000506767 RSPH3Q86UC2 560 aa14.28□□□□□ -0.12
TCOF1-210ENST00000506767 MCPH1Q8NEM0 835 aa14.28□□□□□ -0.12
TCOF1-210ENST00000506767 TCP11Q8WWU5 503 aa14.28□□□□□ -0.12
TCOF1-210ENST00000506767 MRPS27Q92552 414 aaKnown RBP14.28□□□□□ -0.12
TCOF1-210ENST00000506767 PYM1Q9BRP8 204 aaKnown RBP14.28□□□□□ -0.12
TCOF1-210ENST00000506767 TANC1Q9C0D5 1861 aa14.28□□□□□ -0.12
TCOF1-210ENST00000506767 WNT8AQ9H1J5 351 aa14.28□□□□□ -0.12
TCOF1-210ENST00000506767 CUEDC2Q9H467 287 aa14.28□□□□□ -0.12
TCOF1-210ENST00000506767 GOLPH3LQ9H4A5 285 aa14.28□□□□□ -0.12
TCOF1-210ENST00000506767 KCND2Q9NZV8 630 aa14.28□□□□□ -0.12
TCOF1-210ENST00000506767 NR2E3Q9Y5X4 410 aa14.28□□□□□ -0.12
TCOF1-210ENST00000506767 POLR2DO15514 142 aaKnown RBP14.27□□□□□ -0.13
TCOF1-210ENST00000506767 GPR32O75388 356 aa14.27□□□□□ -0.13
TCOF1-210ENST00000506767 CHRNA1P02708 482 aa14.27□□□□□ -0.13
TCOF1-210ENST00000506767 IQCF3P0C7M6 154 aa14.27□□□□□ -0.13
TCOF1-210ENST00000506767 SELPP16109 830 aa14.27□□□□□ -0.13
TCOF1-210ENST00000506767 GUCY2CP25092 1073 aa14.27□□□□□ -0.13
TCOF1-210ENST00000506767 CYP2C18P33260 490 aa14.27□□□□□ -0.13
TCOF1-210ENST00000506767 DNM2P50570 870 aa14.27□□□□□ -0.13
TCOF1-210ENST00000506767 NDUFA8P51970 172 aa14.27□□□□□ -0.13
TCOF1-210ENST00000506767 MRPS6P82932 125 aaKnown RBP14.27□□□□□ -0.13
TCOF1-210ENST00000506767 GPNMBQ14956 572 aa14.27□□□□□ -0.13
TCOF1-210ENST00000506767 MFSD5Q6N075 450 aa14.27□□□□□ -0.13
TCOF1-210ENST00000506767 ZNF710Q8N1W2 664 aa14.27□□□□□ -0.13
TCOF1-210ENST00000506767 FSIP1Q8NA03 581 aa14.27□□□□□ -0.13
TCOF1-210ENST00000506767 IQUBQ8NA54 791 aa14.27□□□□□ -0.13
TCOF1-210ENST00000506767 TMEM143Q96AN5 459 aa14.27□□□□□ -0.13
TCOF1-210ENST00000506767 MAP7D2Q96T17 732 aa14.27□□□□□ -0.13
TCOF1-210ENST00000506767 RUSC1Q9BVN2 902 aa14.27□□□□□ -0.13
TCOF1-210ENST00000506767 TIPINQ9BVW5 301 aa14.27□□□□□ -0.13
TCOF1-210ENST00000506767 PPP1R12CQ9BZL4 782 aa14.27□□□□□ -0.13
TCOF1-210ENST00000506767 BMP2KQ9NSY1 1161 aaPredicted RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms