RNA–Protein interactions for RNA: ENST00000505450.5

PROM1-206, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,349 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-206ENST00000505450 GDF3Q9NR23 364 aa8.65□□□□□ -1.03
PROM1-206ENST00000505450 CHORDC1Q9UHD1 332 aaPredicted RBP8.65□□□□□ -1.03
PROM1-206ENST00000505450 MINPP1Q9UNW1 487 aa8.65□□□□□ -1.03
PROM1-206ENST00000505450 SIK3Q9Y2K2 1263 aa8.65□□□□□ -1.03
PROM1-206ENST00000505450 BZW2Q9Y6E2 419 aaKnown RBP8.65□□□□□ -1.03
PROM1-206ENST00000505450 EXOC3O60645 756 aa8.64□□□□□ -1.03
PROM1-206ENST00000505450 GCFC2P16383 781 aaKnown RBP8.64□□□□□ -1.03
PROM1-206ENST00000505450 ITIH3Q06033 890 aa8.64□□□□□ -1.03
PROM1-206ENST00000505450 ITGB3BPQ13352 177 aaPredicted RBP8.64□□□□□ -1.03
PROM1-206ENST00000505450 USH1GQ495M9 461 aa8.64□□□□□ -1.03
PROM1-206ENST00000505450 ANKRD20A8PQ5CZ79 823 aa8.64□□□□□ -1.03
PROM1-206ENST00000505450 MFSD14BQ5SR56 506 aa8.64□□□□□ -1.03
PROM1-206ENST00000505450 NAIF1Q69YI7 327 aaPredicted RBP8.64□□□□□ -1.03
PROM1-206ENST00000505450 CNKSR2Q8WXI2 1034 aa8.64□□□□□ -1.03
PROM1-206ENST00000505450 ARHGEF2Q92974 986 aaKnown RBP8.64□□□□□ -1.03
PROM1-206ENST00000505450 PKD2L1Q9P0L9 805 aa8.64□□□□□ -1.03
PROM1-206ENST00000505450 ARHGAP23Q9P227 1491 aa8.64□□□□□ -1.03
PROM1-206ENST00000505450 EEF2P13639 858 aaKnown RBP8.64□□□□□ -1.03
PROM1-206ENST00000505450 USP11P51784 963 aa8.64□□□□□ -1.03
PROM1-206ENST00000505450 ZNF157P51786 506 aaPredicted RBP8.64□□□□□ -1.03
PROM1-206ENST00000505450 ZNF131P52739 623 aa8.64□□□□□ -1.03
PROM1-206ENST00000505450 EIF3BP55884 814 aaKnown RBP8.64□□□□□ -1.03
PROM1-206ENST00000505450 GRB10Q13322 594 aa8.64□□□□□ -1.03
PROM1-206ENST00000505450 TNFRSF25Q93038 417 aa8.64□□□□□ -1.03
PROM1-206ENST00000505450 NUDT12Q9BQG2 462 aa8.64□□□□□ -1.03
PROM1-206ENST00000505450 SPATS2LQ9NUQ6 558 aaKnown RBP8.64□□□□□ -1.03
PROM1-206ENST00000505450 ANAPC4Q9UJX5 808 aa8.64□□□□□ -1.03
PROM1-206ENST00000505450 FRMD4BQ9Y2L6 1034 aa8.64□□□□□ -1.03
PROM1-206ENST00000505450 ZBTB12Q9Y330 459 aaPredicted RBP8.64□□□□□ -1.03
PROM1-206ENST00000505450 ERVV-1B6SEH8 477 aa8.64□□□□□ -1.03
PROM1-206ENST00000505450 CELF2O95319 508 aaKnown RBP8.64□□□□□ -1.03
PROM1-206ENST00000505450 KLRK1P26718 216 aa8.64□□□□□ -1.03
PROM1-206ENST00000505450 STAT3P40763 770 aa8.64□□□□□ -1.03
PROM1-206ENST00000505450 GALCP54803 685 aa8.64□□□□□ -1.03
PROM1-206ENST00000505450 PSMD2Q13200 908 aa8.64□□□□□ -1.03
PROM1-206ENST00000505450 SLC29A2Q14542 456 aa8.64□□□□□ -1.03
PROM1-206ENST00000505450 MEI1Q5TIA1 1274 aa8.64□□□□□ -1.03
PROM1-206ENST00000505450 ZNF449Q6P9G9 518 aa8.64□□□□□ -1.03
PROM1-206ENST00000505450 LRIG3Q6UXM1 1119 aa8.64□□□□□ -1.03
PROM1-206ENST00000505450 CLEC10AQ8IUN9 316 aa8.64□□□□□ -1.03
PROM1-206ENST00000505450 CUL5Q93034 780 aa8.64□□□□□ -1.03
PROM1-206ENST00000505450 NRXN3Q9Y4C0 1643 aa8.64□□□□□ -1.03
PROM1-206ENST00000505450 EVI5O60447 810 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 PDHA1P08559 390 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 CNGA1P29973 690 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 FLT3P36888 993 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 HSPA9P38646 679 aaKnown RBP8.63□□□□□ -1.03
PROM1-206ENST00000505450 PLCB3Q01970 1234 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 NPY5RQ15761 445 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 ZNF746Q6NUN9 644 aaPredicted RBP8.63□□□□□ -1.03
PROM1-206ENST00000505450 PHLDB2Q86SQ0 1253 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 TPH2Q8IWU9 490 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 LMNTD2Q8IXW0 634 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 PLVAPQ9BX97 442 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 EDEM3Q9BZQ6 932 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 ECT2Q9H8V3 914 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 NMRK2Q9NPI5 230 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 CPSF2Q9P2I0 782 aaKnown RBP8.63□□□□□ -1.03
PROM1-206ENST00000505450 RIC1Q4ADV7 1423 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 POTEFA5A3E0 1075 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 DCDC2CA8MYV0 355 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 TCP11X1B4DZS4 312 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 DNM1LO00429 736 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 BBOX1O75936 387 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 POTEIP0CG38 1075 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 UCHL3P15374 230 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 PLCG2P16885 1265 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 KRT15P19012 456 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 PDE6CP51160 858 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 BIRC2Q13490 618 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 ZRSR2Q15696 482 aaKnown RBP8.63□□□□□ -1.03
PROM1-206ENST00000505450 CC2D2BQ6DHV5 1058 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 CYP4F22Q6NT55 531 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 POTEGQ6S5H5 508 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 POTEEQ6S8J3 1075 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 KCTD1Q719H9 257 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 PROM2Q8N271 834 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 WDR66Q8TBY9 1149 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 FGFR1OP2Q9NVK5 253 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 USP17L15C9J2P7 530 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 USP17L13C9JLJ4 530 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 USP17L11C9JVI0 530 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 USP17L18D6R9N7 530 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 USP17L22D6RA61 530 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 USP17L17D6RBQ6 530 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 USP17L19D6RCP7 530 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 USP17L20D6RJB6 530 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 THAP12O43422 761 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 TRAPPC3O43617 180 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 MYBL1P10243 752 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 FERP16591 822 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 ALDH3A1P30838 453 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 GBP1P32455 592 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 BTDP43251 543 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 KCNJ1P48048 391 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 CDK8P49336 464 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 MXRA7P84157 204 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 USP17L24Q0WX57 530 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 GNPTABQ3T906 1256 aa8.63□□□□□ -1.03
PROM1-206ENST00000505450 C6orf118Q5T5N4 469 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms