RNA–Protein interactions for RNA: ENST00000505066.5

DDR1-256, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-256	ENST00000505066	MIER3	Q7Z3K6	550 aa		18.47	■□□□□ 0.55
DDR1-256	ENST00000505066	RTN4RL1	Q86UN2	441 aa	Predicted RBP	18.47	■□□□□ 0.55
DDR1-256	ENST00000505066	ADHFE1	Q8IWW8	467 aa		18.47	■□□□□ 0.55
DDR1-256	ENST00000505066	TMEM87A	Q8NBN3	555 aa		18.47	■□□□□ 0.55
DDR1-256	ENST00000505066	RDM1	Q8NG50	284 aa		18.47	■□□□□ 0.55
DDR1-256	ENST00000505066	NLRP7	Q8WX94	980 aa		18.47	■□□□□ 0.55
DDR1-256	ENST00000505066	JPH2	Q9BR39	696 aa	Predicted RBP	18.47	■□□□□ 0.55
DDR1-256	ENST00000505066	TLE6	Q9H808	572 aa		18.47	■□□□□ 0.55
DDR1-256	ENST00000505066	RC3H2	Q9HBD1	1191 aa	Known RBP	18.47	■□□□□ 0.55
DDR1-256	ENST00000505066	TMEM161A	Q9NX61	479 aa		18.47	■□□□□ 0.55
DDR1-256	ENST00000505066	ARIH1	Q9Y4X5	557 aa	Predicted RBP	18.47	■□□□□ 0.55
DDR1-256	ENST00000505066	COL4A4	P53420	1690 aa	Predicted RBP	18.47	■□□□□ 0.55
DDR1-256	ENST00000505066	CHD7	Q9P2D1	2997 aa		18.46	■□□□□ 0.55
DDR1-256	ENST00000505066	NID2	Q14112	1375 aa		18.46	■□□□□ 0.55
DDR1-256	ENST00000505066	MICAL3	Q7RTP6	2002 aa		18.46	■□□□□ 0.55
DDR1-256	ENST00000505066	EIF5B	O60841	1220 aa	Known RBP	18.46	■□□□□ 0.55
DDR1-256	ENST00000505066	VTN	P04004	478 aa		18.46	■□□□□ 0.55
DDR1-256	ENST00000505066	ITGB1	P05556	798 aa		18.46	■□□□□ 0.55
DDR1-256	ENST00000505066	PLA2G5	P39877	138 aa		18.46	■□□□□ 0.55
DDR1-256	ENST00000505066	NLRP11	P59045	1033 aa	Known RBP	18.46	■□□□□ 0.55
DDR1-256	ENST00000505066	HYAL1	Q12794	435 aa		18.46	■□□□□ 0.55
DDR1-256	ENST00000505066	PKN1	Q16512	942 aa		18.46	■□□□□ 0.55
DDR1-256	ENST00000505066	RNF169	Q8NCN4	708 aa		18.46	■□□□□ 0.55
DDR1-256	ENST00000505066	RASGRP4	Q8TDF6	673 aa		18.46	■□□□□ 0.55
DDR1-256	ENST00000505066	LINC01599	Q8WXQ3	324 aa		18.46	■□□□□ 0.55
DDR1-256	ENST00000505066	INO80B	Q9C086	356 aa	Predicted RBP	18.46	■□□□□ 0.55
DDR1-256	ENST00000505066	ELAC1	Q9H777	363 aa	Known RBP	18.46	■□□□□ 0.55
DDR1-256	ENST00000505066	DACT1	Q9NYF0	836 aa		18.46	■□□□□ 0.55
DDR1-256	ENST00000505066	PCDHA4	Q9UN74	947 aa		18.46	■□□□□ 0.55
DDR1-256	ENST00000505066	KAT6A	Q92794	2004 aa		18.45	■□□□□ 0.54
DDR1-256	ENST00000505066	SI	P14410	1827 aa		18.45	■□□□□ 0.54
DDR1-256	ENST00000505066	CARNS1	A5YM72	827 aa		18.45	■□□□□ 0.54
DDR1-256	ENST00000505066	PRR33	A8MZF0	331 aa		18.45	■□□□□ 0.54
DDR1-256	ENST00000505066	PPM1A	P35813	382 aa		18.45	■□□□□ 0.54
DDR1-256	ENST00000505066	CLCN3	P51790	818 aa		18.45	■□□□□ 0.54
DDR1-256	ENST00000505066	PRKCE	Q02156	737 aa		18.45	■□□□□ 0.54
DDR1-256	ENST00000505066	EFHB	Q8N7U6	833 aa		18.45	■□□□□ 0.54
DDR1-256	ENST00000505066	SPPL3	Q8TCT6	385 aa		18.45	■□□□□ 0.54
DDR1-256	ENST00000505066	TBCK	Q8TEA7	893 aa		18.45	■□□□□ 0.54
DDR1-256	ENST00000505066	CRYGN	Q8WXF5	182 aa		18.45	■□□□□ 0.54
DDR1-256	ENST00000505066	ZNF274	Q96GC6	653 aa	Predicted RBP	18.45	■□□□□ 0.54
DDR1-256	ENST00000505066	CDCA3	Q99618	268 aa	Predicted RBP	18.45	■□□□□ 0.54
DDR1-256	ENST00000505066	NAP1L4	Q99733	375 aa	Known RBP	18.45	■□□□□ 0.54
DDR1-256	ENST00000505066	SLK	Q9H2G2	1235 aa	Predicted RBP	18.45	■□□□□ 0.54
DDR1-256	ENST00000505066	TLR9	Q9NR96	1032 aa		18.45	■□□□□ 0.54
DDR1-256	ENST00000505066	CCDC194	A0A1B0GVG4	234 aa		18.44	■□□□□ 0.54
DDR1-256	ENST00000505066	EIF4B	P23588	611 aa	Known RBP	18.44	■□□□□ 0.54
DDR1-256	ENST00000505066	NRIP1	P48552	1158 aa		18.44	■□□□□ 0.54
DDR1-256	ENST00000505066	COL19A1	Q14993	1142 aa		18.44	■□□□□ 0.54
DDR1-256	ENST00000505066	NONO	Q15233	471 aa	Known RBP eCLIP	18.44	■□□□□ 0.54
DDR1-256	ENST00000505066	SMAD2	Q15796	467 aa	Known RBP	18.44	■□□□□ 0.54
DDR1-256	ENST00000505066	XKR3	Q5GH77	459 aa		18.44	■□□□□ 0.54
DDR1-256	ENST00000505066	KRT25	Q7Z3Z0	450 aa		18.44	■□□□□ 0.54
DDR1-256	ENST00000505066	RBM23	Q86U06	439 aa	Known RBP	18.44	■□□□□ 0.54
DDR1-256	ENST00000505066	EXOC8	Q8IYI6	725 aa		18.44	■□□□□ 0.54
DDR1-256	ENST00000505066	BLID	Q8IZY5	108 aa		18.44	■□□□□ 0.54
DDR1-256	ENST00000505066	AGXT2	Q9BYV1	514 aa		18.44	■□□□□ 0.54
DDR1-256	ENST00000505066	GCOM2	Q9BZD3	368 aa	Predicted RBP	18.44	■□□□□ 0.54
DDR1-256	ENST00000505066	TMEM117	Q9H0C3	514 aa		18.44	■□□□□ 0.54
DDR1-256	ENST00000505066	TMX1	Q9H3N1	280 aa		18.44	■□□□□ 0.54
DDR1-256	ENST00000505066	NCOA5	Q9HCD5	579 aa	Known RBP	18.44	■□□□□ 0.54
DDR1-256	ENST00000505066	PDRG1	Q9NUG6	133 aa		18.44	■□□□□ 0.54
DDR1-256	ENST00000505066	SEPT9	Q9UHD8	586 aa	Predicted RBP	18.44	■□□□□ 0.54
DDR1-256	ENST00000505066	TCF20	Q9UGU0	1960 aa	Known RBP	18.43	■□□□□ 0.54
DDR1-256	ENST00000505066	FAM86C2P	A6NEL3	165 aa		18.43	■□□□□ 0.54
DDR1-256	ENST00000505066		C9IYK1	514 aa		18.43	■□□□□ 0.54
DDR1-256	ENST00000505066	MSH4	O15457	936 aa		18.43	■□□□□ 0.54
DDR1-256	ENST00000505066	FGF18	O76093	207 aa		18.43	■□□□□ 0.54
DDR1-256	ENST00000505066	SKI	P12755	728 aa		18.43	■□□□□ 0.54
DDR1-256	ENST00000505066	SFPQ	P23246	707 aa	Known RBP eCLIP	18.43	■□□□□ 0.54
DDR1-256	ENST00000505066	ADAM15	Q13444	863 aa		18.43	■□□□□ 0.54
DDR1-256	ENST00000505066	CTC1	Q2NKJ3	1217 aa		18.43	■□□□□ 0.54
DDR1-256	ENST00000505066	FAM228A	Q86W67	206 aa		18.43	■□□□□ 0.54
DDR1-256	ENST00000505066	LRRC43	Q8N309	656 aa		18.43	■□□□□ 0.54
DDR1-256	ENST00000505066	RSPH1	Q8WYR4	309 aa		18.43	■□□□□ 0.54
DDR1-256	ENST00000505066	WASF1	Q92558	559 aa		18.43	■□□□□ 0.54
DDR1-256	ENST00000505066	ZNF558	Q96NG5	402 aa		18.43	■□□□□ 0.54
DDR1-256	ENST00000505066	TM6SF1	Q9BZW5	370 aa		18.43	■□□□□ 0.54
DDR1-256	ENST00000505066	CDHR5	Q9HBB8	845 aa		18.43	■□□□□ 0.54
DDR1-256	ENST00000505066	ZSWIM6	Q9HCJ5	1215 aa		18.43	■□□□□ 0.54
DDR1-256	ENST00000505066	ENTPD7	Q9NQZ7	604 aa		18.43	■□□□□ 0.54
DDR1-256	ENST00000505066	BDP1	A6H8Y1	2624 aa		18.43	■□□□□ 0.54
DDR1-256	ENST00000505066	ATP4A	P20648	1035 aa		18.42	■□□□□ 0.54
DDR1-256	ENST00000505066	CA8	P35219	290 aa		18.42	■□□□□ 0.54
DDR1-256	ENST00000505066	EVC	P57679	992 aa		18.42	■□□□□ 0.54
DDR1-256	ENST00000505066	ZP2	Q05996	745 aa		18.42	■□□□□ 0.54
DDR1-256	ENST00000505066	STK3	Q13188	491 aa		18.42	■□□□□ 0.54
DDR1-256	ENST00000505066	NTRK3	Q16288	839 aa		18.42	■□□□□ 0.54
DDR1-256	ENST00000505066		Q4G0T1	1027 aa		18.42	■□□□□ 0.54
DDR1-256	ENST00000505066	LRRC71	Q8N4P6	559 aa		18.42	■□□□□ 0.54
DDR1-256	ENST00000505066	COLGALT1	Q8NBJ5	622 aa		18.42	■□□□□ 0.54
DDR1-256	ENST00000505066	TMEM40	Q8WWA1	233 aa		18.42	■□□□□ 0.54
DDR1-256	ENST00000505066	SLC5A5	Q92911	643 aa		18.42	■□□□□ 0.54
DDR1-256	ENST00000505066	MRPL9	Q9BYD2	267 aa	Known RBP	18.42	■□□□□ 0.54
DDR1-256	ENST00000505066	BRMS1	Q9HCU9	246 aa		18.42	■□□□□ 0.54
DDR1-256	ENST00000505066	TYW1	Q9NV66	732 aa	Known RBP	18.42	■□□□□ 0.54
DDR1-256	ENST00000505066	DDX25	Q9UHL0	483 aa	Known RBP	18.42	■□□□□ 0.54
DDR1-256	ENST00000505066	PTPRS	Q13332	1948 aa		18.42	■□□□□ 0.54
DDR1-256	ENST00000505066	SPTBN5	Q9NRC6	3674 aa	Known RBP	18.42	■□□□□ 0.54
DDR1-256	ENST00000505066	DDX11L8	A8MPP1	907 aa		18.41	■□□□□ 0.54

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