RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 ZEB2O60315 1214 aa5.04□□□□□ -1.6
RFC1-208ENST00000504849 EFCAB14O75071 495 aa5.04□□□□□ -1.6
RFC1-208ENST00000504849 FOSP01100 380 aaPredicted RBP5.04□□□□□ -1.6
RFC1-208ENST00000504849 MORC3Q14149 939 aa5.04□□□□□ -1.6
RFC1-208ENST00000504849 STAT4Q14765 748 aa5.04□□□□□ -1.6
RFC1-208ENST00000504849 SURF1Q15526 300 aa5.04□□□□□ -1.6
RFC1-208ENST00000504849 CSRP2Q16527 193 aa5.04□□□□□ -1.6
RFC1-208ENST00000504849 SV2CQ496J9 727 aa5.04□□□□□ -1.6
RFC1-208ENST00000504849 PRR31Q5SQ13 230 aa5.04□□□□□ -1.6
RFC1-208ENST00000504849 NGEFQ8N5V2 710 aa5.04□□□□□ -1.6
RFC1-208ENST00000504849 PPM1EQ8WY54 764 aa5.04□□□□□ -1.6
RFC1-208ENST00000504849 FRAT1Q92837 279 aaPredicted RBP5.04□□□□□ -1.6
RFC1-208ENST00000504849 HOOK2Q96ED9 719 aa5.04□□□□□ -1.6
RFC1-208ENST00000504849 SEMA4AQ9H3S1 761 aa5.04□□□□□ -1.6
RFC1-208ENST00000504849 CHST12Q9NRB3 414 aa5.04□□□□□ -1.6
RFC1-208ENST00000504849 PCDHB10Q9UN67 800 aa5.04□□□□□ -1.6
RFC1-208ENST00000504849 TCAF1Q9Y4C2 921 aa5.04□□□□□ -1.6
RFC1-208ENST00000504849 PBRM1Q86U86 1689 aa5.04□□□□□ -1.6
RFC1-208ENST00000504849 CCDC144AA2RUR9 1427 aa5.04□□□□□ -1.6
RFC1-208ENST00000504849 PTPRGP23470 1445 aa5.04□□□□□ -1.6
RFC1-208ENST00000504849 TARBP1Q13395 1621 aaKnown RBP5.04□□□□□ -1.6
RFC1-208ENST00000504849 ZMYM3Q14202 1370 aa5.04□□□□□ -1.6
RFC1-208ENST00000504849 GPRASP1Q5JY77 1395 aa5.04□□□□□ -1.6
RFC1-208ENST00000504849 ZNF644Q9H582 1327 aaPredicted RBP5.03□□□□□ -1.6
RFC1-208ENST00000504849 FAM83GA6ND36 823 aa5.03□□□□□ -1.6
RFC1-208ENST00000504849 WDHD1O75717 1129 aaPredicted RBP5.03□□□□□ -1.6
RFC1-208ENST00000504849 DNAJC8O75937 253 aaPredicted RBP5.03□□□□□ -1.6
RFC1-208ENST00000504849 ABLIM3O94929 683 aa5.03□□□□□ -1.6
RFC1-208ENST00000504849 ZNF202O95125 648 aa5.03□□□□□ -1.6
RFC1-208ENST00000504849 ASLP04424 464 aa5.03□□□□□ -1.6
RFC1-208ENST00000504849 C8BP07358 591 aa5.03□□□□□ -1.6
RFC1-208ENST00000504849 FLT3P36888 993 aa5.03□□□□□ -1.6
RFC1-208ENST00000504849 KRTAP10-11P60412 298 aa5.03□□□□□ -1.6
RFC1-208ENST00000504849 PPP2R2AP63151 447 aa5.03□□□□□ -1.6
RFC1-208ENST00000504849 POU5F1BQ06416 359 aa5.03□□□□□ -1.6
RFC1-208ENST00000504849 SLC4A10Q6U841 1118 aa5.03□□□□□ -1.6
RFC1-208ENST00000504849 KSR2Q6VAB6 950 aa5.03□□□□□ -1.6
RFC1-208ENST00000504849 USP33Q8TEY7 942 aa5.03□□□□□ -1.6
RFC1-208ENST00000504849 SMARCC1Q92922 1105 aaPredicted RBP5.03□□□□□ -1.6
RFC1-208ENST00000504849 TTC1Q99614 292 aa5.03□□□□□ -1.6
RFC1-208ENST00000504849 SMAD5Q99717 465 aaKnown RBP5.03□□□□□ -1.6
RFC1-208ENST00000504849 NAP1L4Q99733 375 aaKnown RBP5.03□□□□□ -1.6
RFC1-208ENST00000504849 C11orf84Q9BUA3 381 aaPredicted RBP5.03□□□□□ -1.6
RFC1-208ENST00000504849 RTFDC1Q9BY42 306 aaPredicted RBP5.03□□□□□ -1.6
RFC1-208ENST00000504849 TRIM39Q9HCM9 518 aa5.03□□□□□ -1.6
RFC1-208ENST00000504849 PRDM11Q9NQV5 511 aa5.03□□□□□ -1.6
RFC1-208ENST00000504849 ZNF180Q9UJW8 692 aa5.03□□□□□ -1.6
RFC1-208ENST00000504849 DBR1Q9UK59 544 aaKnown RBP5.03□□□□□ -1.6
RFC1-208ENST00000504849 APOBEC2Q9Y235 224 aaKnown RBP5.03□□□□□ -1.6
RFC1-208ENST00000504849 PRAG1Q86YV5 1406 aa5.03□□□□□ -1.6
RFC1-208ENST00000504849 ERBINQ96RT1 1412 aa5.03□□□□□ -1.6
RFC1-208ENST00000504849 IQSEC2Q5JU85 1478 aa5.02□□□□□ -1.61
RFC1-208ENST00000504849 PABPC1P11940 636 aaKnown RBP5.02□□□□□ -1.61
RFC1-208ENST00000504849 PMS1P54277 932 aaKnown RBP5.02□□□□□ -1.61
RFC1-208ENST00000504849 EPHB4P54760 987 aa5.02□□□□□ -1.61
RFC1-208ENST00000504849 GABREP78334 506 aa5.02□□□□□ -1.61
RFC1-208ENST00000504849 SYDE2Q5VT97 1194 aa5.02□□□□□ -1.61
RFC1-208ENST00000504849 HLA-DQA1Q5Y7H0 255 aa5.02□□□□□ -1.61
RFC1-208ENST00000504849 PKN3Q6P5Z2 889 aa5.02□□□□□ -1.61
RFC1-208ENST00000504849 GSTCDQ8NEC7 633 aa5.02□□□□□ -1.61
RFC1-208ENST00000504849 Q8TCH9 128 aa5.02□□□□□ -1.61
RFC1-208ENST00000504849 MBD6Q96DN6 1003 aa5.02□□□□□ -1.61
RFC1-208ENST00000504849 PTPN18Q99952 460 aa5.02□□□□□ -1.61
RFC1-208ENST00000504849 ARPC5LQ9BPX5 153 aa5.02□□□□□ -1.61
RFC1-208ENST00000504849 YIPF4Q9BSR8 244 aa5.02□□□□□ -1.61
RFC1-208ENST00000504849 IFT22Q9H7X7 185 aa5.02□□□□□ -1.61
RFC1-208ENST00000504849 GFOD1Q9NXC2 390 aa5.02□□□□□ -1.61
RFC1-208ENST00000504849 LRP2BPQ9P2M1 347 aa5.02□□□□□ -1.61
RFC1-208ENST00000504849 FBLN5Q9UBX5 448 aa5.02□□□□□ -1.61
RFC1-208ENST00000504849 DISP1Q96F81 1524 aa5.02□□□□□ -1.61
RFC1-208ENST00000504849 MAGI1Q96QZ7 1491 aaPredicted RBP5.01□□□□□ -1.61
RFC1-208ENST00000504849 CGNL1Q0VF96 1302 aa5.01□□□□□ -1.61
RFC1-208ENST00000504849 ARHGEF5Q12774 1597 aa5.01□□□□□ -1.61
RFC1-208ENST00000504849 PRG4Q92954 1404 aaPredicted RBP5.01□□□□□ -1.61
RFC1-208ENST00000504849 A0A087X1B8 175 aa5.01□□□□□ -1.61
RFC1-208ENST00000504849 B4E1Z4 1266 aa5.01□□□□□ -1.61
RFC1-208ENST00000504849 GABRDO14764 452 aa5.01□□□□□ -1.61
RFC1-208ENST00000504849 ZNF623O75123 536 aa5.01□□□□□ -1.61
RFC1-208ENST00000504849 FBXO21O94952 628 aa5.01□□□□□ -1.61
RFC1-208ENST00000504849 FGAP02671 866 aa5.01□□□□□ -1.61
RFC1-208ENST00000504849 CAPNS1P04632 268 aa5.01□□□□□ -1.61
RFC1-208ENST00000504849 TRIM27P14373 513 aa5.01□□□□□ -1.61
RFC1-208ENST00000504849 RAG1P15918 1043 aa5.01□□□□□ -1.61
RFC1-208ENST00000504849 ZSCAN20P17040 1043 aaPredicted RBP5.01□□□□□ -1.61
RFC1-208ENST00000504849 BPIP17213 487 aa5.01□□□□□ -1.61
RFC1-208ENST00000504849 IGFALSP35858 605 aa5.01□□□□□ -1.61
RFC1-208ENST00000504849 NEK4P51957 841 aa5.01□□□□□ -1.61
RFC1-208ENST00000504849 CORO7P57737 925 aa5.01□□□□□ -1.61
RFC1-208ENST00000504849 RAPGEF1Q13905 1077 aa5.01□□□□□ -1.61
RFC1-208ENST00000504849 YOD1Q5VVQ6 348 aaPredicted RBP5.01□□□□□ -1.61
RFC1-208ENST00000504849 PCSK4Q6UW60 755 aa5.01□□□□□ -1.61
RFC1-208ENST00000504849 NSMFQ6X4W1 530 aa5.01□□□□□ -1.61
RFC1-208ENST00000504849 RNF207Q6ZRF8 634 aa5.01□□□□□ -1.61
RFC1-208ENST00000504849 IFNL3Q8IZI9 196 aa5.01□□□□□ -1.61
RFC1-208ENST00000504849 CNTD1Q8N815 330 aa5.01□□□□□ -1.61
RFC1-208ENST00000504849 USP7Q93009 1102 aa5.01□□□□□ -1.61
RFC1-208ENST00000504849 LCORQ96JN0 433 aaPredicted RBP5.01□□□□□ -1.61
RFC1-208ENST00000504849 CRAMP1Q96RY5 1269 aa5.01□□□□□ -1.61
RFC1-208ENST00000504849 SENP7Q9BQF6 1050 aa5.01□□□□□ -1.61
RFC1-208ENST00000504849 SLC12A9Q9BXP2 914 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms