RNA–Protein interactions for RNA: ENST00000504386.1

SKP2-203, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5

Gene SKP2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-203ENST00000504386 ZBTB42B2RXF5 422 aa8.7□□□□□ -1.02
SKP2-203ENST00000504386 EML1O00423 815 aa8.7□□□□□ -1.02
SKP2-203ENST00000504386 STX6O43752 255 aa8.7□□□□□ -1.02
SKP2-203ENST00000504386 MAFO75444 373 aaPredicted RBP8.7□□□□□ -1.02
SKP2-203ENST00000504386 RPS6KA5O75582 802 aa8.7□□□□□ -1.02
SKP2-203ENST00000504386 CHRNA1P02708 482 aa8.7□□□□□ -1.02
SKP2-203ENST00000504386 GHRP10912 638 aa8.7□□□□□ -1.02
SKP2-203ENST00000504386 ZSCAN20P17040 1043 aaPredicted RBP8.7□□□□□ -1.02
SKP2-203ENST00000504386 ATP4AP20648 1035 aa8.7□□□□□ -1.02
SKP2-203ENST00000504386 SFPQP23246 707 aaKnown RBP eCLIP8.7□□□□□ -1.02
SKP2-203ENST00000504386 DNAJB2P25686 324 aa8.7□□□□□ -1.02
SKP2-203ENST00000504386 TECP42680 631 aa8.7□□□□□ -1.02
SKP2-203ENST00000504386 WDR5P61964 334 aaKnown RBP8.7□□□□□ -1.02
SKP2-203ENST00000504386 SPIRE1Q08AE8 756 aa8.7□□□□□ -1.02
SKP2-203ENST00000504386 MGAT3Q09327 533 aa8.7□□□□□ -1.02
SKP2-203ENST00000504386 HIC1Q14526 733 aa8.7□□□□□ -1.02
SKP2-203ENST00000504386 UGCGQ16739 394 aa8.7□□□□□ -1.02
SKP2-203ENST00000504386 XKR9Q5GH70 373 aa8.7□□□□□ -1.02
SKP2-203ENST00000504386 FBXO47Q5MNV8 452 aa8.7□□□□□ -1.02
SKP2-203ENST00000504386 TRAF7Q6Q0C0 670 aa8.7□□□□□ -1.02
SKP2-203ENST00000504386 TRMT1LQ7Z2T5 733 aaKnown RBP8.7□□□□□ -1.02
SKP2-203ENST00000504386 KIAA0319LQ8IZA0 1049 aa8.7□□□□□ -1.02
SKP2-203ENST00000504386 DBF4BQ8NFT6 615 aa8.7□□□□□ -1.02
SKP2-203ENST00000504386 TRAPPC12Q8WVT3 735 aa8.7□□□□□ -1.02
SKP2-203ENST00000504386 NLRP7Q8WX94 980 aa8.7□□□□□ -1.02
SKP2-203ENST00000504386 TIFAQ96CG3 184 aa8.7□□□□□ -1.02
SKP2-203ENST00000504386 CDK5RAP3Q96JB5 506 aa8.7□□□□□ -1.02
SKP2-203ENST00000504386 MTRQ99707 1265 aa8.7□□□□□ -1.02
SKP2-203ENST00000504386 ATP6V0A4Q9HBG4 840 aa8.7□□□□□ -1.02
SKP2-203ENST00000504386 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.7□□□□□ -1.02
SKP2-203ENST00000504386 DACT1Q9NYF0 836 aa8.7□□□□□ -1.02
SKP2-203ENST00000504386 DBR1Q9UK59 544 aaKnown RBP8.7□□□□□ -1.02
SKP2-203ENST00000504386 RWDD3Q9Y3V2 267 aa8.7□□□□□ -1.02
SKP2-203ENST00000504386 INSL6Q9Y581 213 aa8.7□□□□□ -1.02
SKP2-203ENST00000504386 PHLPP2Q6ZVD8 1323 aa8.7□□□□□ -1.02
SKP2-203ENST00000504386 MYH9P35579 1960 aaKnown RBP8.7□□□□□ -1.02
SKP2-203ENST00000504386 DOCK5Q9H7D0 1870 aa8.69□□□□□ -1.02
SKP2-203ENST00000504386 IGKV6-21A0A0C4DH24 114 aa8.69□□□□□ -1.02
SKP2-203ENST00000504386 DENND3A2RUS2 1198 aa8.69□□□□□ -1.02
SKP2-203ENST00000504386 ARHGEF35A5YM69 484 aa8.69□□□□□ -1.02
SKP2-203ENST00000504386 HOXA2O43364 376 aa8.69□□□□□ -1.02
SKP2-203ENST00000504386 TLL1O43897 1013 aa8.69□□□□□ -1.02
SKP2-203ENST00000504386 SLITRK3O94933 977 aa8.69□□□□□ -1.02
SKP2-203ENST00000504386 SKIP12755 728 aa8.69□□□□□ -1.02
SKP2-203ENST00000504386 SYT1P21579 422 aa8.69□□□□□ -1.02
SKP2-203ENST00000504386 EIF4BP23588 611 aaKnown RBP8.69□□□□□ -1.02
SKP2-203ENST00000504386 TXLNAP40222 546 aa8.69□□□□□ -1.02
SKP2-203ENST00000504386 CCT6AP40227 531 aaKnown RBP8.69□□□□□ -1.02
SKP2-203ENST00000504386 CLCN3P51790 818 aa8.69□□□□□ -1.02
SKP2-203ENST00000504386 ATP2C1P98194 919 aaPredicted RBP8.69□□□□□ -1.02
SKP2-203ENST00000504386 CYP4A11Q02928 519 aa8.69□□□□□ -1.02
SKP2-203ENST00000504386 CTTNQ14247 550 aaKnown RBP8.69□□□□□ -1.02
SKP2-203ENST00000504386 LPIN1Q14693 890 aa8.69□□□□□ -1.02
SKP2-203ENST00000504386 EMC2Q15006 297 aa8.69□□□□□ -1.02
SKP2-203ENST00000504386 PPP2R5AQ15172 486 aa8.69□□□□□ -1.02
SKP2-203ENST00000504386 ATL3Q6DD88 541 aa8.69□□□□□ -1.02
SKP2-203ENST00000504386 ANO5Q75V66 913 aa8.69□□□□□ -1.02
SKP2-203ENST00000504386 HERC6Q8IVU3 1022 aa8.69□□□□□ -1.02
SKP2-203ENST00000504386 MYOCDQ8IZQ8 938 aa8.69□□□□□ -1.02
SKP2-203ENST00000504386 DEFB123Q8N688 67 aa8.69□□□□□ -1.02
SKP2-203ENST00000504386 IGSF22Q8N9C0 903 aa8.69□□□□□ -1.02
SKP2-203ENST00000504386 WNT8BQ93098 351 aa8.69□□□□□ -1.02
SKP2-203ENST00000504386 GJA10Q969M2 543 aa8.69□□□□□ -1.02
SKP2-203ENST00000504386 DYDC2Q96IM9 177 aa8.69□□□□□ -1.02
SKP2-203ENST00000504386 ZNF396Q96N95 335 aaPredicted RBP8.69□□□□□ -1.02
SKP2-203ENST00000504386 SAMD11Q96NU1 681 aa8.69□□□□□ -1.02
SKP2-203ENST00000504386 RAD9AQ99638 391 aa8.69□□□□□ -1.02
SKP2-203ENST00000504386 TIPINQ9BVW5 301 aa8.69□□□□□ -1.02
SKP2-203ENST00000504386 TMEM60Q9H2L4 133 aa8.69□□□□□ -1.02
SKP2-203ENST00000504386 DHX33Q9H6R0 707 aaKnown RBP8.69□□□□□ -1.02
SKP2-203ENST00000504386 CHST12Q9NRB3 414 aa8.69□□□□□ -1.02
SKP2-203ENST00000504386 SUCLA2Q9P2R7 463 aaPredicted RBP8.69□□□□□ -1.02
SKP2-203ENST00000504386 LRFN2Q9ULH4 789 aa8.69□□□□□ -1.02
SKP2-203ENST00000504386 DNM3Q9UQ16 869 aa8.69□□□□□ -1.02
SKP2-203ENST00000504386 GINS2Q9Y248 185 aa8.69□□□□□ -1.02
SKP2-203ENST00000504386 PCDHB6Q9Y5E3 794 aa8.69□□□□□ -1.02
SKP2-203ENST00000504386 ATP6V1DQ9Y5K8 247 aa8.69□□□□□ -1.02
SKP2-203ENST00000504386 MORC2Q9Y6X9 1032 aaPredicted RBP8.69□□□□□ -1.02
SKP2-203ENST00000504386 POTEMA6NI47 508 aa8.68□□□□□ -1.02
SKP2-203ENST00000504386 C19orf67A6NJJ6 358 aa8.68□□□□□ -1.02
SKP2-203ENST00000504386 DTNBO60941 627 aa8.68□□□□□ -1.02
SKP2-203ENST00000504386 GJB5O95377 273 aa8.68□□□□□ -1.02
SKP2-203ENST00000504386 SCP2P22307 547 aa8.68□□□□□ -1.02
SKP2-203ENST00000504386 LONP1P36776 959 aaKnown RBP8.68□□□□□ -1.02
SKP2-203ENST00000504386 PHKA2P46019 1235 aa8.68□□□□□ -1.02
SKP2-203ENST00000504386 GPC3P51654 580 aa8.68□□□□□ -1.02
SKP2-203ENST00000504386 NLRP11P59045 1033 aaKnown RBP8.68□□□□□ -1.02
SKP2-203ENST00000504386 POU5F1BQ06416 359 aa8.68□□□□□ -1.02
SKP2-203ENST00000504386 NFX1Q12986 1120 aaKnown RBP8.68□□□□□ -1.02
SKP2-203ENST00000504386 MBTPS1Q14703 1052 aa8.68□□□□□ -1.02
SKP2-203ENST00000504386 PPP2R2DQ66LE6 453 aa8.68□□□□□ -1.02
SKP2-203ENST00000504386 APBB1IPQ7Z5R6 666 aaPredicted RBP8.68□□□□□ -1.02
SKP2-203ENST00000504386 SRGAP1Q7Z6B7 1085 aa8.68□□□□□ -1.02
SKP2-203ENST00000504386 NPAS4Q8IUM7 802 aa8.68□□□□□ -1.02
SKP2-203ENST00000504386 LINC01465Q8N7H1 131 aa8.68□□□□□ -1.02
SKP2-203ENST00000504386 RASSF8Q8NHQ8 419 aa8.68□□□□□ -1.02
SKP2-203ENST00000504386 SNX29Q8TEQ0 813 aa8.68□□□□□ -1.02
SKP2-203ENST00000504386 CALML4Q96GE6 196 aa8.68□□□□□ -1.02
SKP2-203ENST00000504386 YME1L1Q96TA2 773 aa8.68□□□□□ -1.02
SKP2-203ENST00000504386 TSPYL2Q9H2G4 693 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms