RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 GPC5P78333 572 aa17.74■□□□□ 0.43
PCDHA1-203ENST00000504120 CEP95Q96GE4 821 aa17.74■□□□□ 0.43
PCDHA1-203ENST00000504120 KRT10P13645 584 aa17.74■□□□□ 0.43
PCDHA1-203ENST00000504120 ADRA2BP18089 450 aa17.74■□□□□ 0.43
PCDHA1-203ENST00000504120 STXBP2Q15833 593 aa17.74■□□□□ 0.43
PCDHA1-203ENST00000504120 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.74■□□□□ 0.43
PCDHA1-203ENST00000504120 TMEM35BQ8NCS4 154 aa17.74■□□□□ 0.43
PCDHA1-203ENST00000504120 RMDN3Q96TC7 470 aa17.74■□□□□ 0.43
PCDHA1-203ENST00000504120 CNOT8Q9UFF9 292 aaKnown RBP17.74■□□□□ 0.43
PCDHA1-203ENST00000504120 PNMA3Q9UL41 463 aa17.74■□□□□ 0.43
PCDHA1-203ENST00000504120 ABCB11O95342 1321 aa17.74■□□□□ 0.43
PCDHA1-203ENST00000504120 E9PMD0 336 aa17.74■□□□□ 0.43
PCDHA1-203ENST00000504120 TOM1L1O75674 476 aa17.74■□□□□ 0.43
PCDHA1-203ENST00000504120 CYP19A1P11511 503 aaPredicted RBP17.74■□□□□ 0.43
PCDHA1-203ENST00000504120 PLS3P13797 630 aa17.74■□□□□ 0.43
PCDHA1-203ENST00000504120 GCKP35557 465 aa17.74■□□□□ 0.43
PCDHA1-203ENST00000504120 KCNH2Q12809 1159 aa17.74■□□□□ 0.43
PCDHA1-203ENST00000504120 DEPDC1BQ8WUY9 529 aa17.74■□□□□ 0.43
PCDHA1-203ENST00000504120 CFAP36Q96G28 342 aa17.74■□□□□ 0.43
PCDHA1-203ENST00000504120 SEL1LQ9UBV2 794 aa17.74■□□□□ 0.43
PCDHA1-203ENST00000504120 CA4P22748 312 aa17.74■□□□□ 0.43
PCDHA1-203ENST00000504120 KNOP1Q1ED39 458 aaKnown RBP17.74■□□□□ 0.43
PCDHA1-203ENST00000504120 HSP90AA5PQ58FG0 334 aa17.74■□□□□ 0.43
PCDHA1-203ENST00000504120 ATG16L1Q676U5 607 aa17.74■□□□□ 0.43
PCDHA1-203ENST00000504120 GSG1L2A8MUP6 293 aa17.73■□□□□ 0.43
PCDHA1-203ENST00000504120 USP17L15C9J2P7 530 aa17.73■□□□□ 0.43
PCDHA1-203ENST00000504120 USP17L13C9JLJ4 530 aa17.73■□□□□ 0.43
PCDHA1-203ENST00000504120 USP17L11C9JVI0 530 aa17.73■□□□□ 0.43
PCDHA1-203ENST00000504120 USP17L18D6R9N7 530 aa17.73■□□□□ 0.43
PCDHA1-203ENST00000504120 USP17L22D6RA61 530 aa17.73■□□□□ 0.43
PCDHA1-203ENST00000504120 USP17L17D6RBQ6 530 aa17.73■□□□□ 0.43
PCDHA1-203ENST00000504120 USP17L19D6RCP7 530 aa17.73■□□□□ 0.43
PCDHA1-203ENST00000504120 USP17L20D6RJB6 530 aa17.73■□□□□ 0.43
PCDHA1-203ENST00000504120 USP17L24Q0WX57 530 aa17.73■□□□□ 0.43
PCDHA1-203ENST00000504120 USP17L6PQ6QN14 398 aa17.73■□□□□ 0.43
PCDHA1-203ENST00000504120 ZNF710Q8N1W2 664 aa17.73■□□□□ 0.43
PCDHA1-203ENST00000504120 PDZD8Q8NEN9 1154 aa17.73■□□□□ 0.43
PCDHA1-203ENST00000504120 RNF139Q8WU17 664 aa17.73■□□□□ 0.43
PCDHA1-203ENST00000504120 ANAPC7Q9UJX3 599 aa17.73■□□□□ 0.43
PCDHA1-203ENST00000504120 CASP1P29466 404 aa17.73■□□□□ 0.43
PCDHA1-203ENST00000504120 TTC13Q8NBP0 860 aa17.73■□□□□ 0.43
PCDHA1-203ENST00000504120 USP17L10C9JJH3 530 aa17.73■□□□□ 0.43
PCDHA1-203ENST00000504120 CLDN3O15551 220 aa17.73■□□□□ 0.43
PCDHA1-203ENST00000504120 ORC4O43929 436 aa17.73■□□□□ 0.43
PCDHA1-203ENST00000504120 NMT2O60551 498 aa17.73■□□□□ 0.43
PCDHA1-203ENST00000504120 TNFAIP2Q03169 654 aa17.73■□□□□ 0.43
PCDHA1-203ENST00000504120 TXNRD1Q16881 649 aa17.73■□□□□ 0.43
PCDHA1-203ENST00000504120 EFHD1Q9BUP0 239 aa17.73■□□□□ 0.43
PCDHA1-203ENST00000504120 HOXC10Q9NYD6 342 aa17.73■□□□□ 0.43
PCDHA1-203ENST00000504120 MGEA5O60502 916 aa17.73■□□□□ 0.43
PCDHA1-203ENST00000504120 CACNB3P54284 484 aa17.73■□□□□ 0.43
PCDHA1-203ENST00000504120 CLEC17AQ6ZS10 378 aa17.73■□□□□ 0.43
PCDHA1-203ENST00000504120 CELF1Q92879 486 aaKnown RBP17.73■□□□□ 0.43
PCDHA1-203ENST00000504120 ZWILCHQ9H900 591 aa17.73■□□□□ 0.43
PCDHA1-203ENST00000504120 PLAAQ9Y263 795 aa17.73■□□□□ 0.43
PCDHA1-203ENST00000504120 PNPLA7Q6ZV29 1317 aa17.73■□□□□ 0.43
PCDHA1-203ENST00000504120 ZRANB2O95218 330 aaKnown RBP eCLIP17.72■□□□□ 0.43
PCDHA1-203ENST00000504120 ANXA13P27216 316 aa17.72■□□□□ 0.43
PCDHA1-203ENST00000504120 RASIP1Q5U651 963 aa17.72■□□□□ 0.43
PCDHA1-203ENST00000504120 SPOPLQ6IQ16 392 aa17.72■□□□□ 0.43
PCDHA1-203ENST00000504120 NRKQ7Z2Y5 1582 aa17.72■□□□□ 0.43
PCDHA1-203ENST00000504120 MARK3P27448 753 aa17.72■□□□□ 0.43
PCDHA1-203ENST00000504120 SFNP31947 248 aa17.72■□□□□ 0.43
PCDHA1-203ENST00000504120 FAM133BQ5BKY9 247 aaKnown RBP17.72■□□□□ 0.43
PCDHA1-203ENST00000504120 GDAP1Q8TB36 358 aa17.72■□□□□ 0.43
PCDHA1-203ENST00000504120 GINM1Q9NU53 330 aa17.72■□□□□ 0.43
PCDHA1-203ENST00000504120 THEGQ9P2T0 379 aa17.72■□□□□ 0.43
PCDHA1-203ENST00000504120 SNAP23O00161 211 aa17.72■□□□□ 0.43
PCDHA1-203ENST00000504120 HSPA8P11142 646 aaKnown RBP17.72■□□□□ 0.43
PCDHA1-203ENST00000504120 GUF1Q8N442 669 aaKnown RBP17.72■□□□□ 0.43
PCDHA1-203ENST00000504120 BANK1Q8NDB2 785 aa17.72■□□□□ 0.43
PCDHA1-203ENST00000504120 FBXO41Q8TF61 875 aa17.72■□□□□ 0.43
PCDHA1-203ENST00000504120 KLC2Q9H0B6 622 aa17.72■□□□□ 0.43
PCDHA1-203ENST00000504120 KRT37O76014 449 aa17.72■□□□□ 0.43
PCDHA1-203ENST00000504120 CAV1Q03135 178 aa17.72■□□□□ 0.43
PCDHA1-203ENST00000504120 TFDP2Q14188 446 aa17.72■□□□□ 0.43
PCDHA1-203ENST00000504120 MAPK6Q16659 721 aa17.72■□□□□ 0.43
PCDHA1-203ENST00000504120 KRT39Q6A163 491 aa17.72■□□□□ 0.43
PCDHA1-203ENST00000504120 SRRM1Q8IYB3 904 aaKnown RBP17.72■□□□□ 0.43
PCDHA1-203ENST00000504120 THNSL1Q8IYQ7 743 aa17.72■□□□□ 0.43
PCDHA1-203ENST00000504120 ACSL3O95573 720 aa17.71■□□□□ 0.43
PCDHA1-203ENST00000504120 CALB1P05937 261 aa17.71■□□□□ 0.43
PCDHA1-203ENST00000504120 PRR29P0C7W0 189 aa17.71■□□□□ 0.43
PCDHA1-203ENST00000504120 SYNE4Q8N205 404 aa17.71■□□□□ 0.43
PCDHA1-203ENST00000504120 OR6B3Q8NGW1 331 aa17.71■□□□□ 0.43
PCDHA1-203ENST00000504120 SPDL1Q96EA4 605 aa17.71■□□□□ 0.43
PCDHA1-203ENST00000504120 DYDC2Q96IM9 177 aa17.71■□□□□ 0.43
PCDHA1-203ENST00000504120 PIK3C2BO00750 1634 aa17.71■□□□□ 0.43
PCDHA1-203ENST00000504120 ZNF18P17022 549 aa17.71■□□□□ 0.43
PCDHA1-203ENST00000504120 ARL4CP56559 192 aa17.71■□□□□ 0.43
PCDHA1-203ENST00000504120 FOXO4P98177 505 aa17.71■□□□□ 0.43
PCDHA1-203ENST00000504120 KIAA1841Q6NSI8 718 aa17.71■□□□□ 0.43
PCDHA1-203ENST00000504120 MYLK4Q86YV6 388 aaPredicted RBP17.71■□□□□ 0.43
PCDHA1-203ENST00000504120 RYBPQ8N488 228 aaPredicted RBP17.71■□□□□ 0.43
PCDHA1-203ENST00000504120 NSUN6Q8TEA1 469 aaKnown RBP17.71■□□□□ 0.43
PCDHA1-203ENST00000504120 HSPH1Q92598 858 aa17.71■□□□□ 0.43
PCDHA1-203ENST00000504120 CPVLQ9H3G5 476 aa17.71■□□□□ 0.43
PCDHA1-203ENST00000504120 STRIP2Q9ULQ0 834 aa17.71■□□□□ 0.43
PCDHA1-203ENST00000504120 NRXN1Q9ULB1 1477 aa17.71■□□□□ 0.43
PCDHA1-203ENST00000504120 GCLMP48507 274 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms