RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 DRG2P55039 364 aaKnown RBP16.3■□□□□ 0.2
SNF8-203ENST00000504000 HADHBP55084 474 aaKnown RBP16.3■□□□□ 0.2
SNF8-203ENST00000504000 PSMC6P62333 389 aa16.3■□□□□ 0.2
SNF8-203ENST00000504000 PPP2R2AP63151 447 aa16.3■□□□□ 0.2
SNF8-203ENST00000504000 PPATQ06203 517 aa16.3■□□□□ 0.2
SNF8-203ENST00000504000 ACTN3Q08043 901 aaPredicted RBP16.3■□□□□ 0.2
SNF8-203ENST00000504000 PABPC4Q13310 644 aaKnown RBP eCLIP16.3■□□□□ 0.24e-8■■□□□ 14.5
SNF8-203ENST00000504000 KCNV1Q6PIU1 500 aa16.3■□□□□ 0.2
SNF8-203ENST00000504000 DAAM2Q86T65 1068 aa16.3■□□□□ 0.2
SNF8-203ENST00000504000 SP8Q8IXZ3 490 aa16.3■□□□□ 0.2
SNF8-203ENST00000504000 CENPTQ96BT3 561 aa16.3■□□□□ 0.2
SNF8-203ENST00000504000 AMNQ9BXJ7 453 aa16.3■□□□□ 0.2
SNF8-203ENST00000504000 TXLNGYQ9BZA5 131 aa16.3■□□□□ 0.2
SNF8-203ENST00000504000 DDX47Q9H0S4 455 aaKnown RBP16.3■□□□□ 0.2
SNF8-203ENST00000504000 NEUROG2Q9H2A3 272 aa16.3■□□□□ 0.2
SNF8-203ENST00000504000 VCPKMTQ9H867 229 aa16.3■□□□□ 0.2
SNF8-203ENST00000504000 CNOT10Q9H9A5 744 aaKnown RBP16.3■□□□□ 0.2
SNF8-203ENST00000504000 USP40Q9NVE5 1235 aa16.3■□□□□ 0.2
SNF8-203ENST00000504000 KDM4FA0A1W2PPD8 638 aa16.29■□□□□ 0.2
SNF8-203ENST00000504000 E7EVH7 732 aa16.29■□□□□ 0.2
SNF8-203ENST00000504000 PPFIA2O75334 1257 aa16.29■□□□□ 0.2
SNF8-203ENST00000504000 TRIM37O94972 964 aa16.29■□□□□ 0.2
SNF8-203ENST00000504000 MUTP22033 750 aa16.29■□□□□ 0.2
SNF8-203ENST00000504000 RFX1P22670 979 aa16.29■□□□□ 0.2
SNF8-203ENST00000504000 SOX5P35711 763 aa16.29■□□□□ 0.2
SNF8-203ENST00000504000 PSMC2P35998 433 aaKnown RBP16.29■□□□□ 0.2
SNF8-203ENST00000504000 SMTNP53814 917 aa16.29■□□□□ 0.2
SNF8-203ENST00000504000 SEC24CP53992 1094 aa16.29■□□□□ 0.2
SNF8-203ENST00000504000 PTENP60484 403 aa16.29■□□□□ 0.2
SNF8-203ENST00000504000 TCEAL1Q15170 157 aa16.29■□□□□ 0.2
SNF8-203ENST00000504000 OLIG1Q8TAK6 271 aa16.29■□□□□ 0.2
SNF8-203ENST00000504000 CYFIP2Q96F07 1278 aa16.29■□□□□ 0.2
SNF8-203ENST00000504000 AP1M1Q9BXS5 423 aa16.29■□□□□ 0.2
SNF8-203ENST00000504000 AMACRQ9UHK6 382 aa16.29■□□□□ 0.2
SNF8-203ENST00000504000 DAPK3O43293 454 aa16.29■□□□□ 0.2
SNF8-203ENST00000504000 TBCAO75347 108 aaKnown RBP16.29■□□□□ 0.2
SNF8-203ENST00000504000 GALCP54803 685 aa16.29■□□□□ 0.2
SNF8-203ENST00000504000 HDLBPQ00341 1268 aaKnown RBP16.29■□□□□ 0.2
SNF8-203ENST00000504000 PRR16Q569H4 304 aa16.29■□□□□ 0.2
SNF8-203ENST00000504000 DCAF17Q5H9S7 520 aaPredicted RBP16.29■□□□□ 0.2
SNF8-203ENST00000504000 SEL1LQ9UBV2 794 aa16.29■□□□□ 0.2
SNF8-203ENST00000504000 VAV3Q9UKW4 847 aa16.29■□□□□ 0.2
SNF8-203ENST00000504000 FAM187AA6NFU0 413 aa16.28■□□□□ 0.2
SNF8-203ENST00000504000 SPDYE3A6NKU9 549 aa16.28■□□□□ 0.2
SNF8-203ENST00000504000 F8VZ95 297 aa16.28■□□□□ 0.2
SNF8-203ENST00000504000 C6orf229H3BNL8 230 aa16.28■□□□□ 0.2
SNF8-203ENST00000504000 TGFB1I1O43294 461 aa16.28■□□□□ 0.2
SNF8-203ENST00000504000 EVI5O60447 810 aa16.28■□□□□ 0.2
SNF8-203ENST00000504000 SERPINB2P05120 415 aa16.28■□□□□ 0.2
SNF8-203ENST00000504000 NUDT17P0C025 328 aa16.28■□□□□ 0.2
SNF8-203ENST00000504000 GBP1P32455 592 aa16.28■□□□□ 0.2
SNF8-203ENST00000504000 CDR1P51861 262 aa16.28■□□□□ 0.2
SNF8-203ENST00000504000 PPP2R5AQ15172 486 aa16.28■□□□□ 0.2
SNF8-203ENST00000504000 TCERG1LQ5VWI1 586 aa16.28■□□□□ 0.2
SNF8-203ENST00000504000 FBXW10Q5XX13 1052 aa16.28■□□□□ 0.2
SNF8-203ENST00000504000 CDC42EP5Q6NZY7 148 aa16.28■□□□□ 0.2
SNF8-203ENST00000504000 CROCCP2Q86T23 111 aa16.28■□□□□ 0.2
SNF8-203ENST00000504000 DDX42Q86XP3 938 aaKnown RBP eCLIP16.28■□□□□ 0.2
SNF8-203ENST00000504000 VTI1AQ96AJ9 217 aa16.28■□□□□ 0.2
SNF8-203ENST00000504000 MRIQ9BWK5 157 aa16.28■□□□□ 0.2
SNF8-203ENST00000504000 GOLPH3Q9H4A6 298 aa16.28■□□□□ 0.2
SNF8-203ENST00000504000 TUFT1Q9NNX1 390 aa16.28■□□□□ 0.2
SNF8-203ENST00000504000 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.28■□□□□ 0.2
SNF8-203ENST00000504000 RABGAP1Q9Y3P9 1069 aa16.28■□□□□ 0.2
SNF8-203ENST00000504000 FRMPD4Q14CM0 1322 aa16.27■□□□□ 0.2
SNF8-203ENST00000504000 FAM86B1E9PN63 330 aa16.27■□□□□ 0.2
SNF8-203ENST00000504000 H0YHG0 523 aa16.27■□□□□ 0.2
SNF8-203ENST00000504000 MPHOSPH10O00566 681 aaKnown RBP16.27■□□□□ 0.2
SNF8-203ENST00000504000 DDX3YO15523 660 aaKnown RBP16.27■□□□□ 0.2
SNF8-203ENST00000504000 GCNT3O95395 438 aa16.27■□□□□ 0.2
SNF8-203ENST00000504000 FAM86B2P0C5J1 330 aa16.27■□□□□ 0.2
SNF8-203ENST00000504000 HSPA6P17066 643 aa16.27■□□□□ 0.2
SNF8-203ENST00000504000 HPDP32754 393 aaPredicted RBP16.27■□□□□ 0.2
SNF8-203ENST00000504000 CASP4P49662 377 aa16.27■□□□□ 0.2
SNF8-203ENST00000504000 SETQ01105 290 aaPredicted RBP16.27■□□□□ 0.2
SNF8-203ENST00000504000 DHX34Q14147 1143 aaKnown RBP16.27■□□□□ 0.2
SNF8-203ENST00000504000 PLS1Q14651 629 aa16.27■□□□□ 0.2
SNF8-203ENST00000504000 SLFN13Q68D06 897 aa16.27■□□□□ 0.2
SNF8-203ENST00000504000 FAM196AQ6ZSG2 479 aa16.27■□□□□ 0.2
SNF8-203ENST00000504000 CERS5Q8N5B7 392 aa16.27■□□□□ 0.2
SNF8-203ENST00000504000 GMCL1P1Q8NEA9 526 aa16.27■□□□□ 0.2
SNF8-203ENST00000504000 LNX1Q8TBB1 728 aaPredicted RBP16.27■□□□□ 0.2
SNF8-203ENST00000504000 U2AF1L4Q8WU68 220 aaKnown RBP16.27■□□□□ 0.2
SNF8-203ENST00000504000 UBLCP1Q8WVY7 318 aaPredicted RBP16.27■□□□□ 0.2
SNF8-203ENST00000504000 TLCD1Q96CP7 247 aa16.27■□□□□ 0.2
SNF8-203ENST00000504000 GMCL1Q96IK5 515 aa16.27■□□□□ 0.2
SNF8-203ENST00000504000 BHMT2Q9H2M3 363 aa16.27■□□□□ 0.2
SNF8-203ENST00000504000 KCND2Q9NZV8 630 aa16.27■□□□□ 0.2
SNF8-203ENST00000504000 AJAP1Q9UKB5 411 aaPredicted RBP16.27■□□□□ 0.2
SNF8-203ENST00000504000 PIK3CDO00329 1044 aa16.27■□□□□ 0.19
SNF8-203ENST00000504000 MSH4O15457 936 aa16.27■□□□□ 0.19
SNF8-203ENST00000504000 TTI1O43156 1089 aa16.27■□□□□ 0.19
SNF8-203ENST00000504000 NPM3O75607 178 aaKnown RBP16.27■□□□□ 0.19
SNF8-203ENST00000504000 ITGA4P13612 1032 aa16.27■□□□□ 0.19
SNF8-203ENST00000504000 MYBPC2Q14324 1141 aa16.27■□□□□ 0.19
SNF8-203ENST00000504000 APOBEC3HQ6NTF7 200 aaKnown RBP16.27■□□□□ 0.19
SNF8-203ENST00000504000 RPAINQ86UA6 219 aa16.27■□□□□ 0.19
SNF8-203ENST00000504000 FAM186BQ8IYM0 893 aa16.27■□□□□ 0.19
SNF8-203ENST00000504000 SLC35G2Q8TBE7 412 aa16.27■□□□□ 0.19
SNF8-203ENST00000504000 CTNNBL1Q8WYA6 563 aaPredicted RBP16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms