RNA–Protein interactions for RNA: ENST00000502404.5

UBE2D3-211, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-211ENST00000502404 CMTR2Q8IYT2 770 aaKnown RBP12.68□□□□□ -0.38
UBE2D3-211ENST00000502404 P2RX5Q93086 422 aa12.68□□□□□ -0.38
UBE2D3-211ENST00000502404 ZNF689Q96CS4 500 aaPredicted RBP12.68□□□□□ -0.38
UBE2D3-211ENST00000502404 NEK1Q96PY6 1258 aa12.68□□□□□ -0.38
UBE2D3-211ENST00000502404 CD320Q9NPF0 282 aa12.68□□□□□ -0.38
UBE2D3-211ENST00000502404 LRFN2Q9ULH4 789 aa12.68□□□□□ -0.38
UBE2D3-211ENST00000502404 SLC27A5Q9Y2P5 690 aa12.68□□□□□ -0.38
UBE2D3-211ENST00000502404 CCDC196A0A1B0GTZ2 297 aa12.67□□□□□ -0.38
UBE2D3-211ENST00000502404 SMIM35A0A1B0GVV1 85 aa12.67□□□□□ -0.38
UBE2D3-211ENST00000502404 BACH1O14867 736 aa12.67□□□□□ -0.38
UBE2D3-211ENST00000502404 ZBTB43O43298 467 aa12.67□□□□□ -0.38
UBE2D3-211ENST00000502404 DCXO43602 365 aa12.67□□□□□ -0.38
UBE2D3-211ENST00000502404 HBP1O60381 514 aa12.67□□□□□ -0.38
UBE2D3-211ENST00000502404 NR1I2O75469 434 aa12.67□□□□□ -0.38
UBE2D3-211ENST00000502404 HMGB1P09429 215 aaKnown RBP12.67□□□□□ -0.38
UBE2D3-211ENST00000502404 CD52P31358 61 aa12.67□□□□□ -0.38
UBE2D3-211ENST00000502404 FGD1P98174 961 aa12.67□□□□□ -0.38
UBE2D3-211ENST00000502404 KRT76Q01546 638 aa12.67□□□□□ -0.38
UBE2D3-211ENST00000502404 AP3B2Q13367 1082 aa12.67□□□□□ -0.38
UBE2D3-211ENST00000502404 APOA5Q6Q788 366 aa12.67□□□□□ -0.38
UBE2D3-211ENST00000502404 DHX32Q7L7V1 743 aaKnown RBP12.67□□□□□ -0.38
UBE2D3-211ENST00000502404 NIPA1Q7RTP0 329 aa12.67□□□□□ -0.38
UBE2D3-211ENST00000502404 RAB11FIP4Q86YS3 637 aa12.67□□□□□ -0.38
UBE2D3-211ENST00000502404 ADHFE1Q8IWW8 467 aa12.67□□□□□ -0.38
UBE2D3-211ENST00000502404 LRRC2Q9BYS8 371 aa12.67□□□□□ -0.38
UBE2D3-211ENST00000502404 CELF4Q9BZC1 486 aaKnown RBP12.67□□□□□ -0.38
UBE2D3-211ENST00000502404 TCEAL9Q9UHQ7 104 aa12.67□□□□□ -0.38
UBE2D3-211ENST00000502404 V9GY48 417 aaPredicted RBP12.67□□□□□ -0.38
UBE2D3-211ENST00000502404 FAM86C2PA6NEL3 165 aa12.66□□□□□ -0.38
UBE2D3-211ENST00000502404 SMCO2A6NFE2 343 aa12.66□□□□□ -0.38
UBE2D3-211ENST00000502404 MEIS1O00470 390 aa12.66□□□□□ -0.38
UBE2D3-211ENST00000502404 GRM6O15303 877 aa12.66□□□□□ -0.38
UBE2D3-211ENST00000502404 MMP1P03956 469 aa12.66□□□□□ -0.38
UBE2D3-211ENST00000502404 PLCB4Q15147 1175 aa12.66□□□□□ -0.38
UBE2D3-211ENST00000502404 WWC2Q6AWC2 1192 aa12.66□□□□□ -0.38
UBE2D3-211ENST00000502404 UIMC1Q96RL1 719 aa12.66□□□□□ -0.38
UBE2D3-211ENST00000502404 ANO3Q9BYT9 981 aa12.66□□□□□ -0.38
UBE2D3-211ENST00000502404 AGO3Q9H9G7 860 aaKnown RBP12.66□□□□□ -0.38
UBE2D3-211ENST00000502404 AGO4Q9HCK5 861 aaKnown RBP12.66□□□□□ -0.38
UBE2D3-211ENST00000502404 AAASQ9NRG9 546 aa12.66□□□□□ -0.38
UBE2D3-211ENST00000502404 BARHL2Q9NY43 387 aa12.66□□□□□ -0.38
UBE2D3-211ENST00000502404 PADI3Q9ULW8 664 aa12.66□□□□□ -0.38
UBE2D3-211ENST00000502404 PLAGL2Q9UPG8 496 aa12.66□□□□□ -0.38
UBE2D3-211ENST00000502404 PCDHB7Q9Y5E2 793 aa12.66□□□□□ -0.38
UBE2D3-211ENST00000502404 IGSF9BQ9UPX0 1349 aa12.65□□□□□ -0.38
UBE2D3-211ENST00000502404 KDM3AQ9Y4C1 1321 aa12.65□□□□□ -0.38
UBE2D3-211ENST00000502404 FSD2A1L4K1 749 aa12.65□□□□□ -0.38
UBE2D3-211ENST00000502404 LILRB3O75022 631 aa12.65□□□□□ -0.38
UBE2D3-211ENST00000502404 ATG7O95352 703 aa12.65□□□□□ -0.38
UBE2D3-211ENST00000502404 ARP10275 920 aa12.65□□□□□ -0.38
UBE2D3-211ENST00000502404 SCG2P13521 617 aa12.65□□□□□ -0.38
UBE2D3-211ENST00000502404 KLRC1P26715 233 aa12.65□□□□□ -0.38
UBE2D3-211ENST00000502404 SREBF1P36956 1147 aa12.65□□□□□ -0.38
UBE2D3-211ENST00000502404 RCAN1P53805 252 aa12.65□□□□□ -0.38
UBE2D3-211ENST00000502404 IRX6P78412 446 aaPredicted RBP12.65□□□□□ -0.38
UBE2D3-211ENST00000502404 HYAL1Q12794 435 aa12.65□□□□□ -0.38
UBE2D3-211ENST00000502404 NFX1Q12986 1120 aaKnown RBP12.65□□□□□ -0.38
UBE2D3-211ENST00000502404 CTC1Q2NKJ3 1217 aa12.65□□□□□ -0.38
UBE2D3-211ENST00000502404 ZNF484Q5JVG2 852 aa12.65□□□□□ -0.38
UBE2D3-211ENST00000502404 MIS18BP1Q6P0N0 1132 aa12.65□□□□□ -0.38
UBE2D3-211ENST00000502404 MTHFD1LQ6UB35 978 aa12.65□□□□□ -0.38
UBE2D3-211ENST00000502404 CCDC12Q8WUD4 166 aaPredicted RBP12.65□□□□□ -0.38
UBE2D3-211ENST00000502404 PCYT2Q99447 389 aa12.65□□□□□ -0.38
UBE2D3-211ENST00000502404 MTRQ99707 1265 aa12.65□□□□□ -0.38
UBE2D3-211ENST00000502404 IGFLR1Q9H665 355 aa12.65□□□□□ -0.38
UBE2D3-211ENST00000502404 RC3H2Q9HBD1 1191 aaKnown RBP12.65□□□□□ -0.38
UBE2D3-211ENST00000502404 C1orf112Q9NSG2 853 aa12.65□□□□□ -0.38
UBE2D3-211ENST00000502404 PCDHB12Q9Y5F1 795 aa12.65□□□□□ -0.38
UBE2D3-211ENST00000502404 CNTNAP5Q8WYK1 1306 aa12.64□□□□□ -0.39
UBE2D3-211ENST00000502404 TTC3P53804 2025 aa12.64□□□□□ -0.39
UBE2D3-211ENST00000502404 DENND3A2RUS2 1198 aa12.64□□□□□ -0.39
UBE2D3-211ENST00000502404 GOLGA8AA7E2F4 631 aa12.64□□□□□ -0.39
UBE2D3-211ENST00000502404 GOLGA8BA8MQT2 603 aa12.64□□□□□ -0.39
UBE2D3-211ENST00000502404 GPR182O15218 404 aa12.64□□□□□ -0.39
UBE2D3-211ENST00000502404 SARSP49591 514 aaKnown RBP12.64□□□□□ -0.39
UBE2D3-211ENST00000502404 NDUFV1P49821 464 aa12.64□□□□□ -0.39
UBE2D3-211ENST00000502404 EXOSC10Q01780 885 aaKnown RBP12.64□□□□□ -0.39
UBE2D3-211ENST00000502404 ZP2Q05996 745 aa12.64□□□□□ -0.39
UBE2D3-211ENST00000502404 TMEM62Q0P6H9 643 aa12.64□□□□□ -0.39
UBE2D3-211ENST00000502404 SMAD4Q13485 552 aaKnown RBP12.64□□□□□ -0.39
UBE2D3-211ENST00000502404 SMAD2Q15796 467 aaKnown RBP12.64□□□□□ -0.39
UBE2D3-211ENST00000502404 TSGA10IPQ3SY00 556 aa12.64□□□□□ -0.39
UBE2D3-211ENST00000502404 BMP2KLQ5H9B9 411 aa12.64□□□□□ -0.39
UBE2D3-211ENST00000502404 SPOUT1Q5T280 376 aaKnown RBP12.64□□□□□ -0.39
UBE2D3-211ENST00000502404 PDXDC2PQ6P474 469 aa12.64□□□□□ -0.39
UBE2D3-211ENST00000502404 PLA2G4DQ86XP0 818 aa12.64□□□□□ -0.39
UBE2D3-211ENST00000502404 SCUBE3Q8IX30 993 aa12.64□□□□□ -0.39
UBE2D3-211ENST00000502404 CKAP2LQ8IYA6 745 aa12.64□□□□□ -0.39
UBE2D3-211ENST00000502404 CYP2W1Q8TAV3 490 aa12.64□□□□□ -0.39
UBE2D3-211ENST00000502404 ATP8B4Q8TF62 1192 aa12.64□□□□□ -0.39
UBE2D3-211ENST00000502404 KCNH6Q9H252 994 aa12.64□□□□□ -0.39
UBE2D3-211ENST00000502404 ALG13Q9NP73 1137 aaKnown RBP12.64□□□□□ -0.39
UBE2D3-211ENST00000502404 C11orf16Q9NQ32 467 aa12.64□□□□□ -0.39
UBE2D3-211ENST00000502404 ZNF302Q9NR11 478 aa12.64□□□□□ -0.39
UBE2D3-211ENST00000502404 TBC1D22BQ9NU19 505 aa12.64□□□□□ -0.39
UBE2D3-211ENST00000502404 CD207Q9UJ71 328 aa12.64□□□□□ -0.39
UBE2D3-211ENST00000502404 NAP1L2Q9ULW6 460 aaPredicted RBP12.64□□□□□ -0.39
UBE2D3-211ENST00000502404 MRPL42Q9Y6G3 142 aaKnown RBP12.64□□□□□ -0.39
UBE2D3-211ENST00000502404 COL1A2P08123 1366 aa12.64□□□□□ -0.39
UBE2D3-211ENST00000502404 RALGAPA2Q2PPJ7 1873 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms