RNA–Protein interactions for RNA: ENST00000502254.5

PTPN20-212, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-212ENST00000502254 DEFB115Q30KQ5 88 aa6.32□□□□□ -1.4
PTPN20-212ENST00000502254 TKFCQ3LXA3 575 aa6.32□□□□□ -1.4
PTPN20-212ENST00000502254 RILPL1Q5EBL4 403 aa6.32□□□□□ -1.4
PTPN20-212ENST00000502254 TTC38Q5R3I4 469 aa6.32□□□□□ -1.4
PTPN20-212ENST00000502254 WDR78Q5VTH9 848 aa6.32□□□□□ -1.4
PTPN20-212ENST00000502254 ANO1Q5XXA6 986 aa6.32□□□□□ -1.4
PTPN20-212ENST00000502254 ATL3Q6DD88 541 aa6.32□□□□□ -1.4
PTPN20-212ENST00000502254 CLEC17AQ6ZS10 378 aa6.32□□□□□ -1.4
PTPN20-212ENST00000502254 ERMP1Q7Z2K6 904 aa6.32□□□□□ -1.4
PTPN20-212ENST00000502254 MCF2L2Q86YR7 1114 aa6.32□□□□□ -1.4
PTPN20-212ENST00000502254 CCNJLQ8IV13 435 aa6.32□□□□□ -1.4
PTPN20-212ENST00000502254 MB21D1Q8N884 522 aa6.32□□□□□ -1.4
PTPN20-212ENST00000502254 SREK1Q8WXA9 508 aaKnown RBP6.32□□□□□ -1.4
PTPN20-212ENST00000502254 BHMTQ93088 406 aa6.32□□□□□ -1.4
PTPN20-212ENST00000502254 PTPN18Q99952 460 aa6.32□□□□□ -1.4
PTPN20-212ENST00000502254 TINF2Q9BSI4 451 aa6.32□□□□□ -1.4
PTPN20-212ENST00000502254 NOC4LQ9BVI4 516 aaKnown RBP6.32□□□□□ -1.4
PTPN20-212ENST00000502254 TEX13BQ9BXU2 312 aa6.32□□□□□ -1.4
PTPN20-212ENST00000502254 ANO3Q9BYT9 981 aa6.32□□□□□ -1.4
PTPN20-212ENST00000502254 SCAND2PQ9GZW5 306 aaPredicted RBP6.32□□□□□ -1.4
PTPN20-212ENST00000502254 SPATC1LQ9H0A9 340 aa6.32□□□□□ -1.4
PTPN20-212ENST00000502254 ABCB6Q9NP58 842 aa6.32□□□□□ -1.4
PTPN20-212ENST00000502254 DZANK1Q9NVP4 752 aa6.32□□□□□ -1.4
PTPN20-212ENST00000502254 RTEL1Q9NZ71 1219 aa6.32□□□□□ -1.4
PTPN20-212ENST00000502254 RBPJLQ9UBG7 517 aa6.32□□□□□ -1.4
PTPN20-212ENST00000502254 ZNF214Q9UL59 606 aaPredicted RBP6.32□□□□□ -1.4
PTPN20-212ENST00000502254 ADAMTS5Q9UNA0 930 aa6.32□□□□□ -1.4
PTPN20-212ENST00000502254 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.32□□□□□ -1.4
PTPN20-212ENST00000502254 RABGAP1Q9Y3P9 1069 aa6.32□□□□□ -1.4
PTPN20-212ENST00000502254 PCDHB6Q9Y5E3 794 aa6.32□□□□□ -1.4
PTPN20-212ENST00000502254 TMEM238LA0A1B0GVL6 79 aa6.31□□□□□ -1.4
PTPN20-212ENST00000502254 GOLGA6L4A6NEF3 574 aa6.31□□□□□ -1.4
PTPN20-212ENST00000502254 FAM155AB1AL88 458 aaPredicted RBP6.31□□□□□ -1.4
PTPN20-212ENST00000502254 IGF2BP3O00425 579 aaKnown RBP eCLIP6.31□□□□□ -1.4
PTPN20-212ENST00000502254 LCE2BO14633 110 aa6.31□□□□□ -1.4
PTPN20-212ENST00000502254 ATP2A1O14983 1001 aa6.31□□□□□ -1.4
PTPN20-212ENST00000502254 SPTLC2O15270 562 aa6.31□□□□□ -1.4
PTPN20-212ENST00000502254 MARCH6O60337 910 aa6.31□□□□□ -1.4
PTPN20-212ENST00000502254 CCNT1O60563 726 aaKnown RBP6.31□□□□□ -1.4
PTPN20-212ENST00000502254 FOSP01100 380 aaPredicted RBP6.31□□□□□ -1.4
PTPN20-212ENST00000502254 ME1P48163 572 aa6.31□□□□□ -1.4
PTPN20-212ENST00000502254 TRAPPC10P48553 1259 aa6.31□□□□□ -1.4
PTPN20-212ENST00000502254 RACK1P63244 317 aaKnown RBP6.31□□□□□ -1.4
PTPN20-212ENST00000502254 GPLD1P80108 840 aa6.31□□□□□ -1.4
PTPN20-212ENST00000502254 HTRA3P83110 453 aa6.31□□□□□ -1.4
PTPN20-212ENST00000502254 SREBF2Q12772 1141 aa6.31□□□□□ -1.4
PTPN20-212ENST00000502254 AP3B2Q13367 1082 aa6.31□□□□□ -1.4
PTPN20-212ENST00000502254 BAATQ14032 418 aaPredicted RBP6.31□□□□□ -1.4
PTPN20-212ENST00000502254 SLC39A14Q15043 492 aa6.31□□□□□ -1.4
PTPN20-212ENST00000502254 MCTP2Q6DN12 878 aa6.31□□□□□ -1.4
PTPN20-212ENST00000502254 SLC30A10Q6XR72 485 aa6.31□□□□□ -1.4
PTPN20-212ENST00000502254 RNF207Q6ZRF8 634 aa6.31□□□□□ -1.4
PTPN20-212ENST00000502254 NEK8Q86SG6 692 aa6.31□□□□□ -1.4
PTPN20-212ENST00000502254 RIOX2Q8IUF8 465 aa6.31□□□□□ -1.4
PTPN20-212ENST00000502254 CCAR1Q8IX12 1150 aaKnown RBP6.31□□□□□ -1.4
PTPN20-212ENST00000502254 ANKRD35Q8N283 1001 aa6.31□□□□□ -1.4
PTPN20-212ENST00000502254 ANKRD13CQ8N6S4 541 aa6.31□□□□□ -1.4
PTPN20-212ENST00000502254 LINC00301Q8NCQ3 95 aa6.31□□□□□ -1.4
PTPN20-212ENST00000502254 CHST13Q8NET6 341 aa6.31□□□□□ -1.4
PTPN20-212ENST00000502254 DRC1Q96MC2 740 aa6.31□□□□□ -1.4
PTPN20-212ENST00000502254 UIMC1Q96RL1 719 aa6.31□□□□□ -1.4
PTPN20-212ENST00000502254 PARK7Q99497 189 aaKnown RBP6.31□□□□□ -1.4
PTPN20-212ENST00000502254 MOV10L1Q9BXT6 1211 aaKnown RBP6.31□□□□□ -1.4
PTPN20-212ENST00000502254 BHLHE41Q9C0J9 482 aaPredicted RBP6.31□□□□□ -1.4
PTPN20-212ENST00000502254 ACAD9Q9H845 621 aa6.31□□□□□ -1.4
PTPN20-212ENST00000502254 EHMT1Q9H9B1 1298 aa6.31□□□□□ -1.4
PTPN20-212ENST00000502254 LIN7BQ9HAP6 207 aa6.31□□□□□ -1.4
PTPN20-212ENST00000502254 TXNRD2Q9NNW7 524 aa6.31□□□□□ -1.4
PTPN20-212ENST00000502254 LMBRD1Q9NUN5 540 aa6.31□□□□□ -1.4
PTPN20-212ENST00000502254 CPA4Q9UI42 421 aa6.31□□□□□ -1.4
PTPN20-212ENST00000502254 RCOR1Q9UKL0 485 aa6.31□□□□□ -1.4
PTPN20-212ENST00000502254 PPM1HQ9ULR3 514 aa6.31□□□□□ -1.4
PTPN20-212ENST00000502254 CEP131Q9UPN4 1083 aa6.31□□□□□ -1.4
PTPN20-212ENST00000502254 SLC45A1Q9Y2W3 748 aa6.31□□□□□ -1.4
PTPN20-212ENST00000502254 PHIPQ8WWQ0 1821 aa6.31□□□□□ -1.4
PTPN20-212ENST00000502254 C2CD2LO14523 706 aa6.3□□□□□ -1.4
PTPN20-212ENST00000502254 SIN3BO75182 1162 aa6.3□□□□□ -1.4
PTPN20-212ENST00000502254 TDP2O95551 362 aa6.3□□□□□ -1.4
PTPN20-212ENST00000502254 YEATS4O95619 227 aa6.3□□□□□ -1.4
PTPN20-212ENST00000502254 SLC25A27O95847 323 aa6.3□□□□□ -1.4
PTPN20-212ENST00000502254 BMP15O95972 392 aa6.3□□□□□ -1.4
PTPN20-212ENST00000502254 ACPPP15309 386 aa6.3□□□□□ -1.4
PTPN20-212ENST00000502254 EIF2AK2P19525 551 aaKnown RBP6.3□□□□□ -1.4
PTPN20-212ENST00000502254 PTMSP20962 102 aa6.3□□□□□ -1.4
PTPN20-212ENST00000502254 ITPKAP23677 461 aa6.3□□□□□ -1.4
PTPN20-212ENST00000502254 GCLCP48506 637 aaPredicted RBP6.3□□□□□ -1.4
PTPN20-212ENST00000502254 NASPP49321 788 aaPredicted RBP6.3□□□□□ -1.4
PTPN20-212ENST00000502254 HSD17B4P51659 736 aa6.3□□□□□ -1.4
PTPN20-212ENST00000502254 INHBEP58166 350 aa6.3□□□□□ -1.4
PTPN20-212ENST00000502254 RPS6P62753 249 aaKnown RBP6.3□□□□□ -1.4
PTPN20-212ENST00000502254 ERVK-24P63145 666 aa6.3□□□□□ -1.4
PTPN20-212ENST00000502254 CCNA1P78396 465 aa6.3□□□□□ -1.4
PTPN20-212ENST00000502254 PTPAQ15257 358 aa6.3□□□□□ -1.4
PTPN20-212ENST00000502254 ARHGEF16Q5VV41 709 aa6.3□□□□□ -1.4
PTPN20-212ENST00000502254 FOXR1Q6PIV2 292 aa6.3□□□□□ -1.4
PTPN20-212ENST00000502254 HS2ST1Q7LGA3 356 aa6.3□□□□□ -1.4
PTPN20-212ENST00000502254 VWA5B2Q8N398 1253 aa6.3□□□□□ -1.4
PTPN20-212ENST00000502254 JMYQ8N9B5 988 aa6.3□□□□□ -1.4
PTPN20-212ENST00000502254 TMEM102Q8N9M5 508 aaPredicted RBP6.3□□□□□ -1.4
PTPN20-212ENST00000502254 GPRC5AQ8NFJ5 357 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms