RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 RBM28Q9NW13 759 aaKnown RBP4.37□□□□□ -1.71
CLTC-209ENST00000498711 PFDN2Q9UHV9 154 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 DNMT3LQ9UJW3 386 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 CCNL1Q9UK58 526 aaPredicted RBP4.37□□□□□ -1.71
CLTC-209ENST00000498711 CAPN11Q9UMQ6 739 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 PLAAQ9Y263 795 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.37□□□□□ -1.71
CLTC-209ENST00000498711 PDS5AQ29RF7 1337 aaKnown RBP4.37□□□□□ -1.71
CLTC-209ENST00000498711 LRRC37AA6NMS7 1700 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 LOC102724428A0A0B4J2F2 783 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 CTAGE9A4FU28 777 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 H7C1D1 291 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 IFIT3O14879 490 aaKnown RBP4.36□□□□□ -1.71
CLTC-209ENST00000498711 NPHP1O15259 732 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 KIF5CO60282 957 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 ERLIN1O75477 346 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 ATE1O95260 518 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 GHRHP01286 108 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 MYL1P05976 194 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 CYP19A1P11511 503 aaPredicted RBP4.36□□□□□ -1.71
CLTC-209ENST00000498711 SIK1P57059 783 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 CASP8Q14790 479 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 METTL24Q5JXM2 366 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 ZNF658Q5TYW1 1059 aaPredicted RBP4.36□□□□□ -1.71
CLTC-209ENST00000498711 SCARA3Q6AZY7 606 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 LRRC31Q6UY01 552 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 MMGT1Q8N4V1 131 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 SPATA5Q8NB90 893 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 C1orf131Q8NDD1 294 aaKnown RBP4.36□□□□□ -1.71
CLTC-209ENST00000498711 NEK11Q8NG66 645 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 CTCFLQ8NI51 663 aaPredicted RBP4.36□□□□□ -1.71
CLTC-209ENST00000498711 CCDC12Q8WUD4 166 aaPredicted RBP4.36□□□□□ -1.71
CLTC-209ENST00000498711 EMILIN2Q9BXX0 1053 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 IRX2Q9BZI1 471 aaPredicted RBP4.36□□□□□ -1.71
CLTC-209ENST00000498711 RNF41Q9H4P4 317 aaPredicted RBP4.36□□□□□ -1.71
CLTC-209ENST00000498711 THAP9Q9H5L6 903 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 INCENPQ9NQS7 918 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 TMOD3Q9NYL9 352 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 CWC15Q9P013 229 aaKnown RBP4.36□□□□□ -1.71
CLTC-209ENST00000498711 SYNRGQ9UMZ2 1314 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 LAMB1P07942 1786 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 A0A1W2PQJ5 194 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 ANO9A1A5B4 782 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 TRIM75PA6NK02 468 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 KLRC4O43908 158 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 PEX14O75381 377 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 SMNDC1O75940 238 aaKnown RBP eCLIP4.36□□□□□ -1.71
CLTC-209ENST00000498711 EPB41P11171 864 aaKnown RBP4.36□□□□□ -1.71
CLTC-209ENST00000498711 MCM3P25205 808 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 CASP14P31944 242 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 HERVK_113P62684 666 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 VSNL1P62760 191 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 PCDH1Q08174 1060 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 WTAPQ15007 396 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 HLFQ16534 295 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 ZNF827Q17R98 1081 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 TCP11X2Q5H9J9 407 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 WDR59Q6PJI9 974 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 C6orf15Q6UXA7 325 aaPredicted RBP4.36□□□□□ -1.71
CLTC-209ENST00000498711 MFSD6Q6ZSS7 791 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 SPATC1Q76KD6 591 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 PPFIBP1Q86W92 1011 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 RAB11FIP4Q86YS3 637 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 TRIM22Q8IYM9 498 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 GRAMD1CQ8IYS0 662 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 ADSSL1Q8N142 457 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 DAGLBQ8NCG7 672 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 NOC3LQ8WTT2 800 aaKnown RBP4.36□□□□□ -1.71
CLTC-209ENST00000498711 IQCDQ96DY2 449 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 TM9SF2Q99805 663 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 SH3GL2Q99962 352 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 RIOK1Q9BRS2 568 aaKnown RBP4.36□□□□□ -1.71
CLTC-209ENST00000498711 DESI2Q9BSY9 194 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 PAGR1Q9BTK6 254 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 BRIP1Q9BX63 1249 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 HAUS4Q9H6D7 363 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 PDE11AQ9HCR9 933 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 SH3GLB2Q9NR46 395 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 LCMT1Q9UIC8 334 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 MYO6Q9UM54 1294 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 KCNJ14Q9UNX9 436 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 ATXN2Q99700 1313 aaKnown RBP4.36□□□□□ -1.71
CLTC-209ENST00000498711 WDR90Q96KV7 1748 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 MAST2Q6P0Q8 1798 aa4.36□□□□□ -1.71
CLTC-209ENST00000498711 LRRIQ3A6PVS8 624 aaPredicted RBP4.35□□□□□ -1.71
CLTC-209ENST00000498711 B2RBV5 119 aa4.35□□□□□ -1.71
CLTC-209ENST00000498711 AGPSO00116 658 aa4.35□□□□□ -1.71
CLTC-209ENST00000498711 MYO1CO00159 1063 aa4.35□□□□□ -1.71
CLTC-209ENST00000498711 POLR3GO15318 223 aaPredicted RBP4.35□□□□□ -1.71
CLTC-209ENST00000498711 ORC4O43929 436 aa4.35□□□□□ -1.71
CLTC-209ENST00000498711 BNIP3LO60238 219 aa4.35□□□□□ -1.71
CLTC-209ENST00000498711 EIF3JO75822 258 aaKnown RBP4.35□□□□□ -1.71
CLTC-209ENST00000498711 ASMTLO95671 621 aa4.35□□□□□ -1.71
CLTC-209ENST00000498711 CALM1P0DP23 149 aa4.35□□□□□ -1.71
CLTC-209ENST00000498711 CALM2P0DP24 149 aa4.35□□□□□ -1.71
CLTC-209ENST00000498711 CALM3P0DP25 149 aa4.35□□□□□ -1.71
CLTC-209ENST00000498711 SRGNP10124 158 aa4.35□□□□□ -1.71
CLTC-209ENST00000498711 CD33P20138 364 aa4.35□□□□□ -1.71
CLTC-209ENST00000498711 KRT2P35908 639 aa4.35□□□□□ -1.71
CLTC-209ENST00000498711 MAGEA9P43362 315 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms