RNA–Protein interactions for RNA: ENST00000498500.1

THBS3-209, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 768 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-209ENST00000498500 TM6SF1Q9BZW5 370 aa13.71□□□□□ -0.21
THBS3-209ENST00000498500 JPH1Q9HDC5 661 aaPredicted RBP13.71□□□□□ -0.21
THBS3-209ENST00000498500 ENTPD7Q9NQZ7 604 aa13.71□□□□□ -0.21
THBS3-209ENST00000498500 TYW1Q9NV66 732 aaKnown RBP13.71□□□□□ -0.21
THBS3-209ENST00000498500 PUF60Q9UHX1 559 aaKnown RBP13.71□□□□□ -0.21
THBS3-209ENST00000498500 NR2E1Q9Y466 385 aa13.71□□□□□ -0.21
THBS3-209ENST00000498500 SPTBN4Q9H254 2564 aa13.71□□□□□ -0.22
THBS3-209ENST00000498500 KDM3AQ9Y4C1 1321 aa13.7□□□□□ -0.22
THBS3-209ENST00000498500 SMIM35A0A1B0GVV1 85 aa13.7□□□□□ -0.22
THBS3-209ENST00000498500 MAFGO15525 162 aa13.7□□□□□ -0.22
THBS3-209ENST00000498500 MGEA5O60502 916 aa13.7□□□□□ -0.22
THBS3-209ENST00000498500 RPS6KA5O75582 802 aa13.7□□□□□ -0.22
THBS3-209ENST00000498500 MTMR3Q13615 1198 aa13.7□□□□□ -0.22
THBS3-209ENST00000498500 PLCB4Q15147 1175 aa13.7□□□□□ -0.22
THBS3-209ENST00000498500 SYCE2Q6PIF2 218 aa13.7□□□□□ -0.22
THBS3-209ENST00000498500 UBALD2Q8IYN6 164 aa13.7□□□□□ -0.22
THBS3-209ENST00000498500 PSTPIP2Q9H939 334 aa13.7□□□□□ -0.22
THBS3-209ENST00000498500 JADE2Q9NQC1 790 aa13.7□□□□□ -0.22
THBS3-209ENST00000498500 C1orf112Q9NSG2 853 aa13.7□□□□□ -0.22
THBS3-209ENST00000498500 HCSTQ9UBK5 93 aa13.7□□□□□ -0.22
THBS3-209ENST00000498500 SLC9A2Q9UBY0 812 aa13.7□□□□□ -0.22
THBS3-209ENST00000498500 SORCS3Q9UPU3 1222 aa13.7□□□□□ -0.22
THBS3-209ENST00000498500 UBIAD1Q9Y5Z9 338 aa13.7□□□□□ -0.22
THBS3-209ENST00000498500 MYH9P35579 1960 aaKnown RBP13.7□□□□□ -0.22
THBS3-209ENST00000498500 PRR23AA6NEV1 266 aa13.69□□□□□ -0.22
THBS3-209ENST00000498500 SPDYE3A6NKU9 549 aa13.69□□□□□ -0.22
THBS3-209ENST00000498500 FSCN2O14926 492 aa13.69□□□□□ -0.22
THBS3-209ENST00000498500 HOXB8P17481 243 aaPredicted RBP13.69□□□□□ -0.22
THBS3-209ENST00000498500 LAG3P18627 525 aa13.69□□□□□ -0.22
THBS3-209ENST00000498500 ADD1P35611 737 aaKnown RBP13.69□□□□□ -0.22
THBS3-209ENST00000498500 STAT5BP51692 787 aa13.69□□□□□ -0.22
THBS3-209ENST00000498500 FGD1P98174 961 aa13.69□□□□□ -0.22
THBS3-209ENST00000498500 KCNC3Q14003 757 aa13.69□□□□□ -0.22
THBS3-209ENST00000498500 UBE2SQ16763 222 aa13.69□□□□□ -0.22
THBS3-209ENST00000498500 ODR4Q5SWX8 454 aa13.69□□□□□ -0.22
THBS3-209ENST00000498500 PPP1R18Q6NYC8 613 aa13.69□□□□□ -0.22
THBS3-209ENST00000498500 MTHFD1LQ6UB35 978 aa13.69□□□□□ -0.22
THBS3-209ENST00000498500 SLC24A5Q71RS6 500 aa13.69□□□□□ -0.22
THBS3-209ENST00000498500 HEATR3Q7Z4Q2 680 aa13.69□□□□□ -0.22
THBS3-209ENST00000498500 RASGRP4Q8TDF6 673 aa13.69□□□□□ -0.22
THBS3-209ENST00000498500 MRPS27Q92552 414 aaKnown RBP13.69□□□□□ -0.22
THBS3-209ENST00000498500 TCF25Q9BQ70 676 aa13.69□□□□□ -0.22
THBS3-209ENST00000498500 ATP6V0A4Q9HBG4 840 aa13.69□□□□□ -0.22
THBS3-209ENST00000498500 ERVK-5Q9HDB9 667 aa13.69□□□□□ -0.22
THBS3-209ENST00000498500 RGS18Q9NS28 235 aa13.69□□□□□ -0.22
THBS3-209ENST00000498500 NAP1L2Q9ULW6 460 aaPredicted RBP13.69□□□□□ -0.22
THBS3-209ENST00000498500 LZTS1Q9Y250 596 aa13.69□□□□□ -0.22
THBS3-209ENST00000498500 NOC2LQ9Y3T9 749 aaKnown RBP13.69□□□□□ -0.22
THBS3-209ENST00000498500 FAM186AA6NE01 2351 aa13.69□□□□□ -0.22
THBS3-209ENST00000498500 HIDE1A8MVS5 230 aa13.68□□□□□ -0.22
THBS3-209ENST00000498500 BRD1O95696 1058 aa13.68□□□□□ -0.22
THBS3-209ENST00000498500 KLRC1P26715 233 aa13.68□□□□□ -0.22
THBS3-209ENST00000498500 NBL1P41271 181 aa13.68□□□□□ -0.22
THBS3-209ENST00000498500 NTRK3Q16288 839 aa13.68□□□□□ -0.22
THBS3-209ENST00000498500 CES5AQ6NT32 575 aa13.68□□□□□ -0.22
THBS3-209ENST00000498500 FAM43BQ6ZT52 329 aaPredicted RBP13.68□□□□□ -0.22
THBS3-209ENST00000498500 PLPPR4Q7Z2D5 763 aa13.68□□□□□ -0.22
THBS3-209ENST00000498500 TMEM105Q8N8V8 129 aa13.68□□□□□ -0.22
THBS3-209ENST00000498500 CASP10Q92851 521 aa13.68□□□□□ -0.22
THBS3-209ENST00000498500 SDF4Q9BRK5 362 aa13.68□□□□□ -0.22
THBS3-209ENST00000498500 MFSD1Q9H3U5 465 aa13.68□□□□□ -0.22
THBS3-209ENST00000498500 CWH43Q9H720 699 aa13.68□□□□□ -0.22
THBS3-209ENST00000498500 NGRNQ9NPE2 291 aaKnown RBP13.68□□□□□ -0.22
THBS3-209ENST00000498500 CDH22Q9UJ99 828 aa13.68□□□□□ -0.22
THBS3-209ENST00000498500 PCDHA6Q9UN73 950 aa13.68□□□□□ -0.22
THBS3-209ENST00000498500 ST3GAL5Q9UNP4 418 aa13.68□□□□□ -0.22
THBS3-209ENST00000498500 PCDHA8Q9Y5H6 950 aa13.68□□□□□ -0.22
THBS3-209ENST00000498500 CYP46A1Q9Y6A2 500 aa13.68□□□□□ -0.22
THBS3-209ENST00000498500 RIF1Q5UIP0 2472 aaKnown RBP13.67□□□□□ -0.22
THBS3-209ENST00000498500 C2CD4DB7Z1M9 353 aa13.67□□□□□ -0.22
THBS3-209ENST00000498500 C9IYK1 514 aa13.67□□□□□ -0.22
THBS3-209ENST00000498500 hCG_1984214I3L0E3 225 aa13.67□□□□□ -0.22
THBS3-209ENST00000498500 GPR182O15218 404 aa13.67□□□□□ -0.22
THBS3-209ENST00000498500 SEC24BO95487 1268 aa13.67□□□□□ -0.22
THBS3-209ENST00000498500 FGFR1P11362 822 aa13.67□□□□□ -0.22
THBS3-209ENST00000498500 PDIA3P30101 505 aaKnown RBP13.67□□□□□ -0.22
THBS3-209ENST00000498500 ANAPC15P60006 121 aa13.67□□□□□ -0.22
THBS3-209ENST00000498500 ACTR2P61160 394 aa13.67□□□□□ -0.22
THBS3-209ENST00000498500 PLCB3Q01970 1234 aa13.67□□□□□ -0.22
THBS3-209ENST00000498500 KRT17Q04695 432 aa13.67□□□□□ -0.22
THBS3-209ENST00000498500 TPRNQ4KMQ1 711 aa13.67□□□□□ -0.22
THBS3-209ENST00000498500 TMC7Q7Z402 723 aa13.67□□□□□ -0.22
THBS3-209ENST00000498500 ZNF713Q8N859 430 aaPredicted RBP13.67□□□□□ -0.22
THBS3-209ENST00000498500 NKD2Q969F2 451 aaPredicted RBP13.67□□□□□ -0.22
THBS3-209ENST00000498500 NECTIN4Q96NY8 510 aa13.67□□□□□ -0.22
THBS3-209ENST00000498500 POMKQ9H5K3 350 aa13.67□□□□□ -0.22
THBS3-209ENST00000498500 CDHR5Q9HBB8 845 aa13.67□□□□□ -0.22
THBS3-209ENST00000498500 NCOA5Q9HCD5 579 aaKnown RBP13.67□□□□□ -0.22
THBS3-209ENST00000498500 KCNH7Q9NS40 1196 aa13.67□□□□□ -0.22
THBS3-209ENST00000498500 TMEM161AQ9NX61 479 aa13.67□□□□□ -0.22
THBS3-209ENST00000498500 BARHL2Q9NY43 387 aa13.67□□□□□ -0.22
THBS3-209ENST00000498500 V9GY48 417 aaPredicted RBP13.67□□□□□ -0.22
THBS3-209ENST00000498500 CA8P35219 290 aa13.66□□□□□ -0.22
THBS3-209ENST00000498500 NAPAP54920 295 aa13.66□□□□□ -0.22
THBS3-209ENST00000498500 ITIH3Q06033 890 aa13.66□□□□□ -0.22
THBS3-209ENST00000498500 PFKFB3Q16875 520 aaPredicted RBP13.66□□□□□ -0.22
THBS3-209ENST00000498500 C8orf34Q49A92 452 aa13.66□□□□□ -0.22
THBS3-209ENST00000498500 ASTLQ6HA08 431 aaPredicted RBP13.66□□□□□ -0.22
THBS3-209ENST00000498500 KCNT2Q6UVM3 1135 aa13.66□□□□□ -0.22
THBS3-209ENST00000498500 ERMP1Q7Z2K6 904 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms