RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 UBALD2Q8IYN6 164 aa15.88■□□□□ 0.13
CCDC58-207ENST00000498466 CASP10Q92851 521 aa15.88■□□□□ 0.13
CCDC58-207ENST00000498466 PGBD1Q96JS3 809 aa15.88■□□□□ 0.13
CCDC58-207ENST00000498466 MTA3Q9BTC8 594 aa15.88■□□□□ 0.13
CCDC58-207ENST00000498466 ELAC1Q9H777 363 aaKnown RBP15.88■□□□□ 0.13
CCDC58-207ENST00000498466 CDH22Q9UJ99 828 aa15.88■□□□□ 0.13
CCDC58-207ENST00000498466 SORCS3Q9UPU3 1222 aa15.88■□□□□ 0.13
CCDC58-207ENST00000498466 IGKV6D-21A0A0A0MT36 114 aa15.87■□□□□ 0.13
CCDC58-207ENST00000498466 PROB1E7EW31 1015 aa15.87■□□□□ 0.13
CCDC58-207ENST00000498466 SH2B2O14492 632 aaPredicted RBP15.87■□□□□ 0.13
CCDC58-207ENST00000498466 MCM5P33992 734 aa15.87■□□□□ 0.13
CCDC58-207ENST00000498466 PPM1AP35813 382 aa15.87■□□□□ 0.13
CCDC58-207ENST00000498466 PBX3P40426 434 aa15.87■□□□□ 0.13
CCDC58-207ENST00000498466 CRYBB1P53674 252 aaPredicted RBP15.87■□□□□ 0.13
CCDC58-207ENST00000498466 FAM189BP81408 668 aa15.87■□□□□ 0.13
CCDC58-207ENST00000498466 FOXK2Q01167 660 aa15.87■□□□□ 0.13
CCDC58-207ENST00000498466 ZNF484Q5JVG2 852 aa15.87■□□□□ 0.13
CCDC58-207ENST00000498466 PDXDC2PQ6P474 469 aa15.87■□□□□ 0.13
CCDC58-207ENST00000498466 KCNT2Q6UVM3 1135 aa15.87■□□□□ 0.13
CCDC58-207ENST00000498466 ASCL5Q7RTU5 278 aa15.87■□□□□ 0.13
CCDC58-207ENST00000498466 ABI1Q8IZP0 508 aa15.87■□□□□ 0.13
CCDC58-207ENST00000498466 MAP4K1Q92918 833 aa15.87■□□□□ 0.13
CCDC58-207ENST00000498466 TMEM87BQ96K49 555 aa15.87■□□□□ 0.13
CCDC58-207ENST00000498466 ZNF558Q96NG5 402 aa15.87■□□□□ 0.13
CCDC58-207ENST00000498466 TMEM117Q9H0C3 514 aa15.87■□□□□ 0.13
CCDC58-207ENST00000498466 RBM8AQ9Y5S9 174 aaKnown RBP15.87■□□□□ 0.13
CCDC58-207ENST00000498466 SLC12A7Q9Y666 1083 aa15.87■□□□□ 0.13
CCDC58-207ENST00000498466 COL1A2P08123 1366 aa15.87■□□□□ 0.13
CCDC58-207ENST00000498466 FNDC1Q4ZHG4 1894 aaPredicted RBP15.86■□□□□ 0.13
CCDC58-207ENST00000498466 LOXHD1Q8IVV2 1947 aa15.86■□□□□ 0.13
CCDC58-207ENST00000498466 C2CD4DB7Z1M9 353 aa15.86■□□□□ 0.13
CCDC58-207ENST00000498466 SGSM2O43147 1006 aa15.86■□□□□ 0.13
CCDC58-207ENST00000498466 HOXA2O43364 376 aa15.86■□□□□ 0.13
CCDC58-207ENST00000498466 BRD1O95696 1058 aa15.86■□□□□ 0.13
CCDC58-207ENST00000498466 CCNE2O96020 404 aa15.86■□□□□ 0.13
CCDC58-207ENST00000498466 ZNF76P36508 570 aa15.86■□□□□ 0.13
CCDC58-207ENST00000498466 NAPAP54920 295 aa15.86■□□□□ 0.13
CCDC58-207ENST00000498466 ABHD15Q6UXT9 468 aa15.86■□□□□ 0.13
CCDC58-207ENST00000498466 LRRC55Q6ZSA7 311 aa15.86■□□□□ 0.13
CCDC58-207ENST00000498466 TMTC3Q6ZXV5 915 aa15.86■□□□□ 0.13
CCDC58-207ENST00000498466 CCDC60Q8IWA6 550 aaPredicted RBP15.86■□□□□ 0.13
CCDC58-207ENST00000498466 CKAP2LQ8IYA6 745 aa15.86■□□□□ 0.13
CCDC58-207ENST00000498466 LRRC43Q8N309 656 aa15.86■□□□□ 0.13
CCDC58-207ENST00000498466 METTL13Q8N6R0 699 aa15.86■□□□□ 0.13
CCDC58-207ENST00000498466 TMEM105Q8N8V8 129 aa15.86■□□□□ 0.13
CCDC58-207ENST00000498466 NECTIN4Q96NY8 510 aa15.86■□□□□ 0.13
CCDC58-207ENST00000498466 CASD1Q96PB1 797 aa15.86■□□□□ 0.13
CCDC58-207ENST00000498466 POMKQ9H5K3 350 aa15.86■□□□□ 0.13
CCDC58-207ENST00000498466 ZNF302Q9NR11 478 aa15.86■□□□□ 0.13
CCDC58-207ENST00000498466 HCFC2Q9Y5Z7 792 aa15.86■□□□□ 0.13
CCDC58-207ENST00000498466 MEIS1O00470 390 aa15.85■□□□□ 0.13
CCDC58-207ENST00000498466 FOSP01100 380 aaPredicted RBP15.85■□□□□ 0.13
CCDC58-207ENST00000498466 VTNP04004 478 aa15.85■□□□□ 0.13
CCDC58-207ENST00000498466 CA8P35219 290 aa15.85■□□□□ 0.13
CCDC58-207ENST00000498466 LIFRP42702 1097 aa15.85■□□□□ 0.13
CCDC58-207ENST00000498466 ITIH3Q06033 890 aa15.85■□□□□ 0.13
CCDC58-207ENST00000498466 DSC3Q14574 896 aa15.85■□□□□ 0.13
CCDC58-207ENST00000498466 SMC1AQ14683 1233 aaKnown RBP15.85■□□□□ 0.13
CCDC58-207ENST00000498466 WWC2Q6AWC2 1192 aa15.85■□□□□ 0.13
CCDC58-207ENST00000498466 SWSAP1Q6NVH7 229 aa15.85■□□□□ 0.13
CCDC58-207ENST00000498466 MIS18BP1Q6P0N0 1132 aa15.85■□□□□ 0.13
CCDC58-207ENST00000498466 TRMT1LQ7Z2T5 733 aaKnown RBP15.85■□□□□ 0.13
CCDC58-207ENST00000498466 MICU3Q86XE3 530 aa15.85■□□□□ 0.13
CCDC58-207ENST00000498466 FANCBQ8NB91 859 aa15.85■□□□□ 0.13
CCDC58-207ENST00000498466 EXOC6Q8TAG9 804 aa15.85■□□□□ 0.13
CCDC58-207ENST00000498466 ANO3Q9BYT9 981 aa15.85■□□□□ 0.13
CCDC58-207ENST00000498466 ADAM7Q9H2U9 754 aa15.85■□□□□ 0.13
CCDC58-207ENST00000498466 RIC8AQ9NPQ8 531 aa15.85■□□□□ 0.13
CCDC58-207ENST00000498466 SPG21Q9NZD8 308 aa15.85■□□□□ 0.13
CCDC58-207ENST00000498466 PRR23AA6NEV1 266 aa15.84■□□□□ 0.13
CCDC58-207ENST00000498466 ZBTB42B2RXF5 422 aa15.84■□□□□ 0.13
CCDC58-207ENST00000498466 GPR32O75388 356 aa15.84■□□□□ 0.13
CCDC58-207ENST00000498466 C22orf31O95567 290 aa15.84■□□□□ 0.13
CCDC58-207ENST00000498466 ZSCAN20P17040 1043 aaPredicted RBP15.84■□□□□ 0.13
CCDC58-207ENST00000498466 NBL1P41271 181 aa15.84■□□□□ 0.13
CCDC58-207ENST00000498466 ADCY7P51828 1080 aa15.84■□□□□ 0.13
CCDC58-207ENST00000498466 MRPL43Q8N983 215 aaKnown RBP15.84■□□□□ 0.13
CCDC58-207ENST00000498466 RNF169Q8NCN4 708 aa15.84■□□□□ 0.13
CCDC58-207ENST00000498466 MFSD1Q9H3U5 465 aa15.84■□□□□ 0.13
CCDC58-207ENST00000498466 SMOC2Q9H3U7 446 aa15.84■□□□□ 0.13
CCDC58-207ENST00000498466 RNF19AQ9NV58 838 aa15.84■□□□□ 0.13
CCDC58-207ENST00000498466 C2orf71A6NGG8 1288 aa15.83■□□□□ 0.12
CCDC58-207ENST00000498466 ASGR2P07307 311 aa15.83■□□□□ 0.12
CCDC58-207ENST00000498466 ATP4AP20648 1035 aa15.83■□□□□ 0.12
CCDC58-207ENST00000498466 MTHFRP42898 656 aa15.83■□□□□ 0.12
CCDC58-207ENST00000498466 ASTLQ6HA08 431 aaPredicted RBP15.83■□□□□ 0.12
CCDC58-207ENST00000498466 TYW1BQ6NUM6 668 aa15.83■□□□□ 0.12
CCDC58-207ENST00000498466 TDRD5Q8NAT2 981 aaKnown RBP15.83■□□□□ 0.12
CCDC58-207ENST00000498466 BBXQ8WY36 941 aaPredicted RBP15.83■□□□□ 0.12
CCDC58-207ENST00000498466 LRRC2Q9BYS8 371 aa15.83■□□□□ 0.12
CCDC58-207ENST00000498466 AKT3Q9Y243 479 aa15.83■□□□□ 0.12
CCDC58-207ENST00000498466 CACNA1HO95180 2353 aa15.83■□□□□ 0.12
CCDC58-207ENST00000498466 PLXNA3P51805 1871 aa15.82■□□□□ 0.12
CCDC58-207ENST00000498466 CLASP2O75122 1294 aaKnown RBP15.82■□□□□ 0.12
CCDC58-207ENST00000498466 WEE2P0C1S8 567 aa15.82■□□□□ 0.12
CCDC58-207ENST00000498466 SREBF1P36956 1147 aa15.82■□□□□ 0.12
CCDC58-207ENST00000498466 CLCN3P51790 818 aa15.82■□□□□ 0.12
CCDC58-207ENST00000498466 NLRP11P59045 1033 aaKnown RBP15.82■□□□□ 0.12
CCDC58-207ENST00000498466 AP3B2Q13367 1082 aa15.82■□□□□ 0.12
CCDC58-207ENST00000498466 COL9A3Q14050 684 aaPredicted RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms