RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 IL25Q9H293 177 aa13.31□□□□□ -0.28
CDK9-205ENST00000498339 OSBPL3Q9H4L5 887 aa13.31□□□□□ -0.28
CDK9-205ENST00000498339 CDHR5Q9HBB8 845 aa13.31□□□□□ -0.28
CDK9-205ENST00000498339 KCNH7Q9NS40 1196 aa13.31□□□□□ -0.28
CDK9-205ENST00000498339 C2orf16Q68DN1 1984 aa13.31□□□□□ -0.28
CDK9-205ENST00000498339 DMXL1Q9Y485 3027 aa13.3□□□□□ -0.28
CDK9-205ENST00000498339 hCG_1642624A0A1W2PR95 340 aa13.3□□□□□ -0.28
CDK9-205ENST00000498339 E7EWF7 191 aa13.3□□□□□ -0.28
CDK9-205ENST00000498339 HBP1O60381 514 aa13.3□□□□□ -0.28
CDK9-205ENST00000498339 RFX1P22670 979 aa13.3□□□□□ -0.28
CDK9-205ENST00000498339 SLC26A2P50443 739 aa13.3□□□□□ -0.28
CDK9-205ENST00000498339 CLCN5P51795 746 aa13.3□□□□□ -0.28
CDK9-205ENST00000498339 FAM160B1Q5W0V3 765 aa13.3□□□□□ -0.28
CDK9-205ENST00000498339 CASC1Q6TDU7 716 aa13.3□□□□□ -0.28
CDK9-205ENST00000498339 HEATR3Q7Z4Q2 680 aa13.3□□□□□ -0.28
CDK9-205ENST00000498339 FAM228AQ86W67 206 aa13.3□□□□□ -0.28
CDK9-205ENST00000498339 CKAP2LQ8IYA6 745 aa13.3□□□□□ -0.28
CDK9-205ENST00000498339 CMTR1Q8N1G2 835 aaKnown RBP13.3□□□□□ -0.28
CDK9-205ENST00000498339 METTL13Q8N6R0 699 aa13.3□□□□□ -0.28
CDK9-205ENST00000498339 LZTS2Q9BRK4 669 aa13.3□□□□□ -0.28
CDK9-205ENST00000498339 ELAC1Q9H777 363 aaKnown RBP13.3□□□□□ -0.28
CDK9-205ENST00000498339 SPG21Q9NZD8 308 aa13.3□□□□□ -0.28
CDK9-205ENST00000498339 LIMD1Q9UGP4 676 aa13.3□□□□□ -0.28
CDK9-205ENST00000498339 FBXL21Q9UKT6 434 aa13.3□□□□□ -0.28
CDK9-205ENST00000498339 NFASCO94856 1347 aa13.3□□□□□ -0.28
CDK9-205ENST00000498339 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.29□□□□□ -0.28
CDK9-205ENST00000498339 VTNP04004 478 aa13.29□□□□□ -0.28
CDK9-205ENST00000498339 RXRAP19793 462 aa13.29□□□□□ -0.28
CDK9-205ENST00000498339 GNAQP50148 359 aa13.29□□□□□ -0.28
CDK9-205ENST00000498339 KIAA1841Q6NSI8 718 aa13.29□□□□□ -0.28
CDK9-205ENST00000498339 LRRC55Q6ZSA7 311 aa13.29□□□□□ -0.28
CDK9-205ENST00000498339 FAM43BQ6ZT52 329 aaPredicted RBP13.29□□□□□ -0.28
CDK9-205ENST00000498339 TRMT1LQ7Z2T5 733 aaKnown RBP13.29□□□□□ -0.28
CDK9-205ENST00000498339 KIAA0319LQ8IZA0 1049 aa13.29□□□□□ -0.28
CDK9-205ENST00000498339 PLCD3Q8N3E9 789 aa13.29□□□□□ -0.28
CDK9-205ENST00000498339 CCDC82Q8N4S0 544 aa13.29□□□□□ -0.28
CDK9-205ENST00000498339 SRBD1Q8N5C6 995 aaKnown RBP13.29□□□□□ -0.28
CDK9-205ENST00000498339 C12orf76Q8N812 135 aaPredicted RBP13.29□□□□□ -0.28
CDK9-205ENST00000498339 CASD1Q96PB1 797 aa13.29□□□□□ -0.28
CDK9-205ENST00000498339 MAP3K14Q99558 947 aa13.29□□□□□ -0.28
CDK9-205ENST00000498339 HINFPQ9BQA5 517 aa13.29□□□□□ -0.28
CDK9-205ENST00000498339 MXRA8Q9BRK3 442 aa13.29□□□□□ -0.28
CDK9-205ENST00000498339 RWDD1Q9H446 243 aaPredicted RBP13.29□□□□□ -0.28
CDK9-205ENST00000498339 TCEAL9Q9UHQ7 104 aa13.29□□□□□ -0.28
CDK9-205ENST00000498339 COL1A2P08123 1366 aa13.29□□□□□ -0.28
CDK9-205ENST00000498339 C2orf71A6NGG8 1288 aa13.28□□□□□ -0.28
CDK9-205ENST00000498339 CCDC69A6NI79 296 aa13.28□□□□□ -0.28
CDK9-205ENST00000498339 STK25O00506 426 aa13.28□□□□□ -0.28
CDK9-205ENST00000498339 CLASP2O75122 1294 aaKnown RBP13.28□□□□□ -0.28
CDK9-205ENST00000498339 ARP10275 920 aa13.28□□□□□ -0.28
CDK9-205ENST00000498339 ZSCAN20P17040 1043 aaPredicted RBP13.28□□□□□ -0.28
CDK9-205ENST00000498339 METAP2P50579 478 aaKnown RBP eCLIP13.28□□□□□ -0.28
CDK9-205ENST00000498339 CRYBB1P53674 252 aaPredicted RBP13.28□□□□□ -0.28
CDK9-205ENST00000498339 ANGPT1Q15389 498 aa13.28□□□□□ -0.28
CDK9-205ENST00000498339 ATAT1Q5SQI0 421 aa13.28□□□□□ -0.28
CDK9-205ENST00000498339 CWF19L1Q69YN2 538 aaKnown RBP13.28□□□□□ -0.28
CDK9-205ENST00000498339 PDXDC2PQ6P474 469 aa13.28□□□□□ -0.28
CDK9-205ENST00000498339 RAB11FIP4Q86YS3 637 aa13.28□□□□□ -0.28
CDK9-205ENST00000498339 ZDHHC14Q8IZN3 488 aa13.28□□□□□ -0.28
CDK9-205ENST00000498339 MRPL43Q8N983 215 aaKnown RBP13.28□□□□□ -0.28
CDK9-205ENST00000498339 CYP2W1Q8TAV3 490 aa13.28□□□□□ -0.28
CDK9-205ENST00000498339 ACSF2Q96CM8 615 aaPredicted RBP13.28□□□□□ -0.28
CDK9-205ENST00000498339 PGBD1Q96JS3 809 aa13.28□□□□□ -0.28
CDK9-205ENST00000498339 SCLT1Q96NL6 688 aa13.28□□□□□ -0.28
CDK9-205ENST00000498339 LY9Q9HBG7 655 aa13.28□□□□□ -0.28
CDK9-205ENST00000498339 ZNF302Q9NR11 478 aa13.28□□□□□ -0.28
CDK9-205ENST00000498339 DZANK1Q9NVP4 752 aa13.28□□□□□ -0.28
CDK9-205ENST00000498339 TAF6LQ9Y6J9 622 aa13.28□□□□□ -0.28
CDK9-205ENST00000498339 DNAH14Q0VDD8 3507 aa13.27□□□□□ -0.28
CDK9-205ENST00000498339 EOMESO95936 686 aa13.27□□□□□ -0.29
CDK9-205ENST00000498339 SMARCA1P28370 1054 aa13.27□□□□□ -0.29
CDK9-205ENST00000498339 ZNF76P36508 570 aa13.27□□□□□ -0.29
CDK9-205ENST00000498339 ANTXR2P58335 489 aa13.27□□□□□ -0.29
CDK9-205ENST00000498339 NUCB1Q02818 461 aa13.27□□□□□ -0.29
CDK9-205ENST00000498339 PTH1RQ03431 593 aa13.27□□□□□ -0.29
CDK9-205ENST00000498339 ITGB3BPQ13352 177 aaPredicted RBP13.27□□□□□ -0.29
CDK9-205ENST00000498339 ZNF484Q5JVG2 852 aa13.27□□□□□ -0.29
CDK9-205ENST00000498339 KANK3Q6NY19 840 aa13.27□□□□□ -0.29
CDK9-205ENST00000498339 TMC5Q6UXY8 1006 aa13.27□□□□□ -0.29
CDK9-205ENST00000498339 CCDC60Q8IWA6 550 aaPredicted RBP13.27□□□□□ -0.29
CDK9-205ENST00000498339 SMC5Q8IY18 1101 aa13.27□□□□□ -0.29
CDK9-205ENST00000498339 SLC39A11Q8N1S5 342 aa13.27□□□□□ -0.29
CDK9-205ENST00000498339 HELQQ8TDG4 1101 aa13.27□□□□□ -0.29
CDK9-205ENST00000498339 IGDCC4Q8TDY8 1250 aa13.27□□□□□ -0.29
CDK9-205ENST00000498339 RUFY2Q8WXA3 655 aa13.27□□□□□ -0.29
CDK9-205ENST00000498339 TMEM169Q96HH4 297 aa13.27□□□□□ -0.29
CDK9-205ENST00000498339 AGO4Q9HCK5 861 aaKnown RBP13.27□□□□□ -0.29
CDK9-205ENST00000498339 CYP26B1Q9NR63 512 aa13.27□□□□□ -0.29
CDK9-205ENST00000498339 AKT3Q9Y243 479 aa13.27□□□□□ -0.29
CDK9-205ENST00000498339 NT5C1B-RDH14C9J2C7 533 aa13.26□□□□□ -0.29
CDK9-205ENST00000498339 CXCL14O95715 111 aa13.26□□□□□ -0.29
CDK9-205ENST00000498339 EPCAMP16422 314 aa13.26□□□□□ -0.29
CDK9-205ENST00000498339 AOC1P19801 751 aa13.26□□□□□ -0.29
CDK9-205ENST00000498339 ALDH7A1P49419 539 aaKnown RBP13.26□□□□□ -0.29
CDK9-205ENST00000498339 NAPAP54920 295 aa13.26□□□□□ -0.29
CDK9-205ENST00000498339 FAM189BP81408 668 aa13.26□□□□□ -0.29
CDK9-205ENST00000498339 CEP55Q53EZ4 464 aa13.26□□□□□ -0.29
CDK9-205ENST00000498339 MIS18BP1Q6P0N0 1132 aa13.26□□□□□ -0.29
CDK9-205ENST00000498339 CCDC149Q6ZUS6 474 aa13.26□□□□□ -0.29
CDK9-205ENST00000498339 DGLUCYQ7Z3D6 616 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms