RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 CT47A1Q5JQC4 288 aaPredicted RBP6.69□□□□□ -1.34
SSR3-209ENST00000498205 PHF19Q5T6S3 580 aa6.69□□□□□ -1.34
SSR3-209ENST00000498205 OTOP2Q7RTS6 562 aa6.69□□□□□ -1.34
SSR3-209ENST00000498205 KRT26Q7Z3Y9 468 aa6.69□□□□□ -1.34
SSR3-209ENST00000498205 KBTBD2Q8IY47 623 aa6.69□□□□□ -1.34
SSR3-209ENST00000498205 CHTF18Q8WVB6 975 aa6.69□□□□□ -1.34
SSR3-209ENST00000498205 LEO1Q8WVC0 666 aaPredicted RBP6.69□□□□□ -1.34
SSR3-209ENST00000498205 TTC1Q99614 292 aa6.69□□□□□ -1.34
SSR3-209ENST00000498205 IFT22Q9H7X7 185 aa6.69□□□□□ -1.34
SSR3-209ENST00000498205 APOBEC2Q9Y235 224 aaKnown RBP6.69□□□□□ -1.34
SSR3-209ENST00000498205 VWA7Q9Y334 891 aa6.69□□□□□ -1.34
SSR3-209ENST00000498205 ZDHHC9Q9Y397 364 aa6.69□□□□□ -1.34
SSR3-209ENST00000498205 ULK1O75385 1050 aa6.68□□□□□ -1.34
SSR3-209ENST00000498205 FKBP9O95302 570 aa6.68□□□□□ -1.34
SSR3-209ENST00000498205 HMGCRP04035 888 aa6.68□□□□□ -1.34
SSR3-209ENST00000498205 VIL1P09327 827 aaKnown RBP6.68□□□□□ -1.34
SSR3-209ENST00000498205 MOGSQ13724 837 aa6.68□□□□□ -1.34
SSR3-209ENST00000498205 SEPT7Q16181 437 aaKnown RBP6.68□□□□□ -1.34
SSR3-209ENST00000498205 RNF187Q5TA31 235 aaPredicted RBP6.68□□□□□ -1.34
SSR3-209ENST00000498205 SLFN12LQ6IEE8 588 aa6.68□□□□□ -1.34
SSR3-209ENST00000498205 ARHGEF18Q6ZSZ5 1173 aa6.68□□□□□ -1.34
SSR3-209ENST00000498205 FKBP9P1Q75LS8 142 aa6.68□□□□□ -1.34
SSR3-209ENST00000498205 LPPQ93052 612 aa6.68□□□□□ -1.34
SSR3-209ENST00000498205 TUBGCP5Q96RT8 1024 aa6.68□□□□□ -1.34
SSR3-209ENST00000498205 INVSQ9Y283 1065 aa6.68□□□□□ -1.34
SSR3-209ENST00000498205 CCDC88BA6NC98 1476 aa6.67□□□□□ -1.34
SSR3-209ENST00000498205 A0A0G2JLL6 359 aaPredicted RBP6.67□□□□□ -1.34
SSR3-209ENST00000498205 B4GALT3O60512 393 aa6.67□□□□□ -1.34
SSR3-209ENST00000498205 PLATP00750 562 aa6.67□□□□□ -1.34
SSR3-209ENST00000498205 BPIP17213 487 aa6.67□□□□□ -1.34
SSR3-209ENST00000498205 PTX3P26022 381 aaPredicted RBP6.67□□□□□ -1.34
SSR3-209ENST00000498205 CSF2RBP32927 897 aa6.67□□□□□ -1.34
SSR3-209ENST00000498205 CNR2P34972 360 aa6.67□□□□□ -1.34
SSR3-209ENST00000498205 MEOX1P50221 254 aa6.67□□□□□ -1.34
SSR3-209ENST00000498205 PPP2CBP62714 309 aa6.67□□□□□ -1.34
SSR3-209ENST00000498205 PPP2CAP67775 309 aa6.67□□□□□ -1.34
SSR3-209ENST00000498205 SMAD3P84022 425 aaKnown RBP6.67□□□□□ -1.34
SSR3-209ENST00000498205 CD83Q01151 205 aa6.67□□□□□ -1.34
SSR3-209ENST00000498205 SLC6A3Q01959 620 aa6.67□□□□□ -1.34
SSR3-209ENST00000498205 FAPQ12884 760 aa6.67□□□□□ -1.34
SSR3-209ENST00000498205 LILRA6Q6PI73 481 aa6.67□□□□□ -1.34
SSR3-209ENST00000498205 LRSAM1Q6UWE0 723 aa6.67□□□□□ -1.34
SSR3-209ENST00000498205 ZNF610Q8N9Z0 462 aa6.67□□□□□ -1.34
SSR3-209ENST00000498205 RELTQ969Z4 430 aa6.67□□□□□ -1.34
SSR3-209ENST00000498205 GPR101Q96P66 508 aaPredicted RBP6.67□□□□□ -1.34
SSR3-209ENST00000498205 SEC61A2Q9H9S3 476 aa6.67□□□□□ -1.34
SSR3-209ENST00000498205 KCMF1Q9P0J7 381 aa6.67□□□□□ -1.34
SSR3-209ENST00000498205 KCNG1Q9UIX4 513 aa6.67□□□□□ -1.34
SSR3-209ENST00000498205 SYNPO2Q9UMS6 1093 aa6.67□□□□□ -1.34
SSR3-209ENST00000498205 SLC4A7Q9Y6M7 1214 aa6.67□□□□□ -1.34
SSR3-209ENST00000498205 LAMTOR5O43504 91 aa6.66□□□□□ -1.34
SSR3-209ENST00000498205 SYN1P17600 705 aa6.66□□□□□ -1.34
SSR3-209ENST00000498205 ADCYAP1R1P41586 468 aa6.66□□□□□ -1.34
SSR3-209ENST00000498205 DGKDQ16760 1214 aa6.66□□□□□ -1.34
SSR3-209ENST00000498205 ZNF827Q17R98 1081 aa6.66□□□□□ -1.34
SSR3-209ENST00000498205 PRAMEF9Q5VWM5 478 aa6.66□□□□□ -1.34
SSR3-209ENST00000498205 BMP8AQ7Z5Y6 402 aa6.66□□□□□ -1.34
SSR3-209ENST00000498205 C20orf173Q96LM9 149 aa6.66□□□□□ -1.34
SSR3-209ENST00000498205 WNT8AQ9H1J5 351 aa6.66□□□□□ -1.34
SSR3-209ENST00000498205 BICRAQ9NZM4 1560 aa6.65□□□□□ -1.34
SSR3-209ENST00000498205 B4GALT4O60513 344 aa6.65□□□□□ -1.34
SSR3-209ENST00000498205 RAB11FIP3O75154 756 aa6.65□□□□□ -1.34
SSR3-209ENST00000498205 EPHB4P54760 987 aa6.65□□□□□ -1.34
SSR3-209ENST00000498205 ADCY2Q08462 1091 aa6.65□□□□□ -1.34
SSR3-209ENST00000498205 ATP13A4Q4VNC1 1196 aa6.65□□□□□ -1.34
SSR3-209ENST00000498205 SLFN13Q68D06 897 aa6.65□□□□□ -1.34
SSR3-209ENST00000498205 TRIM68Q6AZZ1 485 aa6.65□□□□□ -1.34
SSR3-209ENST00000498205 KIAA1841Q6NSI8 718 aa6.65□□□□□ -1.34
SSR3-209ENST00000498205 ESRP1Q6NXG1 681 aaKnown RBP6.65□□□□□ -1.34
SSR3-209ENST00000498205 FRMD7Q6ZUT3 714 aa6.65□□□□□ -1.34
SSR3-209ENST00000498205 ESPNLQ6ZVH7 1005 aa6.65□□□□□ -1.34
SSR3-209ENST00000498205 RTKN2Q8IZC4 609 aa6.65□□□□□ -1.34
SSR3-209ENST00000498205 GFM2Q969S9 779 aaKnown RBP6.65□□□□□ -1.34
SSR3-209ENST00000498205 ZMAT4Q9H898 229 aa6.65□□□□□ -1.34
SSR3-209ENST00000498205 SPC25Q9HBM1 224 aa6.65□□□□□ -1.34
SSR3-209ENST00000498205 EMC7Q9NPA0 242 aa6.65□□□□□ -1.34
SSR3-209ENST00000498205 SPTLC3Q9NUV7 552 aa6.65□□□□□ -1.34
SSR3-209ENST00000498205 SAE1Q9UBE0 346 aaPredicted RBP6.65□□□□□ -1.34
SSR3-209ENST00000498205 TNIKQ9UKE5 1360 aa6.65□□□□□ -1.35
SSR3-209ENST00000498205 ST20-MTHFSA0A0A6YYL1 179 aa6.64□□□□□ -1.35
SSR3-209ENST00000498205 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.64□□□□□ -1.35
SSR3-209ENST00000498205 TGM5O43548 720 aa6.64□□□□□ -1.35
SSR3-209ENST00000498205 H2AFYO75367 372 aaKnown RBP6.64□□□□□ -1.35
SSR3-209ENST00000498205 RGS3P49796 1198 aa6.64□□□□□ -1.35
SSR3-209ENST00000498205 KCNQ1P51787 676 aa6.64□□□□□ -1.35
SSR3-209ENST00000498205 SESN3P58005 492 aa6.64□□□□□ -1.35
SSR3-209ENST00000498205 TERF2Q15554 542 aa6.64□□□□□ -1.35
SSR3-209ENST00000498205 DDB1Q16531 1140 aa6.64□□□□□ -1.35
SSR3-209ENST00000498205 SKOR2Q2VWA4 1001 aaPredicted RBP6.64□□□□□ -1.35
SSR3-209ENST00000498205 KANSL1Q7Z3B3 1105 aa6.64□□□□□ -1.35
SSR3-209ENST00000498205 RSAD2Q8WXG1 361 aa6.64□□□□□ -1.35
SSR3-209ENST00000498205 SLC5A5Q92911 643 aa6.64□□□□□ -1.35
SSR3-209ENST00000498205 ADAM7Q9H2U9 754 aa6.64□□□□□ -1.35
SSR3-209ENST00000498205 H2AFY2Q9P0M6 372 aaPredicted RBP6.64□□□□□ -1.35
SSR3-209ENST00000498205 DUSP10Q9Y6W6 482 aa6.64□□□□□ -1.35
SSR3-209ENST00000498205 ZNF536O15090 1300 aa6.64□□□□□ -1.35
SSR3-209ENST00000498205 DNAJC6O75061 913 aa6.63□□□□□ -1.35
SSR3-209ENST00000498205 PRPF6O94906 941 aaKnown RBP6.63□□□□□ -1.35
SSR3-209ENST00000498205 CNGA1P29973 690 aa6.63□□□□□ -1.35
SSR3-209ENST00000498205 ADCY8P40145 1251 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms