RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 TBCAO75347 108 aaKnown RBP15.08■□□□□ 0
CPNE1-227ENST00000498056 DGAT1O75907 488 aa15.08■□□□□ 0
CPNE1-227ENST00000498056 SLFN14P0C7P3 912 aa15.08■□□□□ 0
CPNE1-227ENST00000498056 GNAT1P11488 350 aa15.08■□□□□ 0
CPNE1-227ENST00000498056 COL6A1P12109 1028 aa15.08■□□□□ 0
CPNE1-227ENST00000498056 XRCC6P12956 609 aaKnown RBP eCLIP15.08■□□□□ 0
CPNE1-227ENST00000498056 CAPN2P17655 700 aa15.08■□□□□ 0
CPNE1-227ENST00000498056 CLCN3P51790 818 aa15.08■□□□□ 0
CPNE1-227ENST00000498056 ZNF200P98182 395 aaPredicted RBP15.08■□□□□ 0
CPNE1-227ENST00000498056 SNW1Q13573 536 aaKnown RBP15.08■□□□□ 0
CPNE1-227ENST00000498056 HIC1Q14526 733 aa15.08■□□□□ 0
CPNE1-227ENST00000498056 TARBP2Q15633 366 aaKnown RBP15.08■□□□□ 0
CPNE1-227ENST00000498056 TRIM60Q495X7 471 aa15.08■□□□□ 0
CPNE1-227ENST00000498056 LONRF3Q496Y0 759 aa15.08■□□□□ 0
CPNE1-227ENST00000498056 MTHFD1LQ6UB35 978 aa15.08■□□□□ 0
CPNE1-227ENST00000498056 SESTD1Q86VW0 696 aa15.08■□□□□ 0
CPNE1-227ENST00000498056 METTL13Q8N6R0 699 aa15.08■□□□□ 0
CPNE1-227ENST00000498056 SYT2Q8N9I0 419 aaPredicted RBP15.08■□□□□ 0
CPNE1-227ENST00000498056 RETREG2Q8NC44 543 aa15.08■□□□□ 0
CPNE1-227ENST00000498056 FAM49AQ9H0Q0 323 aaPredicted RBP15.08■□□□□ 0
CPNE1-227ENST00000498056 TRMT13Q9NUP7 481 aaKnown RBP15.08■□□□□ 0
CPNE1-227ENST00000498056 PPME1Q9Y570 386 aa15.08■□□□□ 0
CPNE1-227ENST00000498056 MROH7Q68CQ1 1323 aa15.08■□□□□ 0
CPNE1-227ENST00000498056 NPHP3-ACAD11A0A0J9YXS1 232 aa15.07■□□□□ 0
CPNE1-227ENST00000498056 TREHO43280 583 aa15.07■□□□□ 0
CPNE1-227ENST00000498056 B4GALT4O60513 344 aa15.07■□□□□ 0
CPNE1-227ENST00000498056 PRR29P0C7W0 189 aa15.07■□□□□ 0
CPNE1-227ENST00000498056 CYP2C9P11712 490 aa15.07■□□□□ 0
CPNE1-227ENST00000498056 CYP11B2P19099 503 aa15.07■□□□□ 0
CPNE1-227ENST00000498056 KLRC1P26715 233 aa15.07■□□□□ 0
CPNE1-227ENST00000498056 ASIC1P78348 528 aa15.07■□□□□ 0
CPNE1-227ENST00000498056 PTPN11Q06124 597 aaPredicted RBP15.07■□□□□ 0
CPNE1-227ENST00000498056 PTGISQ16647 500 aa15.07■□□□□ 0
CPNE1-227ENST00000498056 FAM102BQ5T8I3 360 aa15.07■□□□□ 0
CPNE1-227ENST00000498056 RINT1Q6NUQ1 792 aa15.07■□□□□ 0
CPNE1-227ENST00000498056 DYMQ7RTS9 669 aa15.07■□□□□ 0
CPNE1-227ENST00000498056 MCPH1Q8NEM0 835 aa15.07■□□□□ 0
CPNE1-227ENST00000498056 CEP89Q96ST8 783 aa15.07■□□□□ 0
CPNE1-227ENST00000498056 JPH2Q9BR39 696 aaPredicted RBP15.07■□□□□ 0
CPNE1-227ENST00000498056 REEP2Q9BRK0 252 aa15.07■□□□□ 0
CPNE1-227ENST00000498056 BLZF1Q9H2G9 400 aa15.07■□□□□ 0
CPNE1-227ENST00000498056 ZHX3Q9H4I2 956 aa15.07■□□□□ 0
CPNE1-227ENST00000498056 SUGCTQ9HAC7 445 aa15.07■□□□□ 0
CPNE1-227ENST00000498056 ATP11BQ9Y2G3 1177 aa15.07■□□□□ 0
CPNE1-227ENST00000498056 MYMKA6NI61 221 aa15.06■□□□□ 0
CPNE1-227ENST00000498056 TLR3O15455 904 aaKnown RBP15.06■□□□□ 0
CPNE1-227ENST00000498056 MAGEB2O15479 319 aa15.06■□□□□ 0
CPNE1-227ENST00000498056 HIP1RO75146 1068 aa15.06■□□□□ 0
CPNE1-227ENST00000498056 MAFO75444 373 aaPredicted RBP15.06■□□□□ 0
CPNE1-227ENST00000498056 CASP1P29466 404 aa15.06■□□□□ 0
CPNE1-227ENST00000498056 HOXC8P31273 242 aa15.06■□□□□ 0
CPNE1-227ENST00000498056 RTP1P59025 263 aa15.06■□□□□ 0
CPNE1-227ENST00000498056 NFKBIBQ15653 356 aa15.06■□□□□ 0
CPNE1-227ENST00000498056 MARCH8Q5T0T0 291 aa15.06■□□□□ 0
CPNE1-227ENST00000498056 EFCAB12Q6NXP0 572 aa15.06■□□□□ 0
CPNE1-227ENST00000498056 SLC39A5Q6ZMH5 540 aa15.06■□□□□ 0
CPNE1-227ENST00000498056 RUFY4Q6ZNE9 571 aa15.06■□□□□ 0
CPNE1-227ENST00000498056 TMEM143Q96AN5 459 aa15.06■□□□□ 0
CPNE1-227ENST00000498056 PAGE5Q96GU1 130 aa15.06■□□□□ 0
CPNE1-227ENST00000498056 MAP7D2Q96T17 732 aa15.06■□□□□ 0
CPNE1-227ENST00000498056 PPP1R16BQ96T49 567 aa15.06■□□□□ 0
CPNE1-227ENST00000498056 LRRC27Q9C0I9 530 aa15.06■□□□□ 0
CPNE1-227ENST00000498056 POLR3FQ9H1D9 316 aaPredicted RBP15.06■□□□□ 0
CPNE1-227ENST00000498056 NUP62CLQ9H1M0 184 aa15.06■□□□□ 0
CPNE1-227ENST00000498056 DHX33Q9H6R0 707 aaKnown RBP15.06■□□□□ 0
CPNE1-227ENST00000498056 GPRC5CQ9NQ84 441 aa15.06■□□□□ 0
CPNE1-227ENST00000498056 XPNPEP1Q9NQW7 623 aa15.06■□□□□ 0
CPNE1-227ENST00000498056 KBTBD4Q9NVX7 518 aa15.06■□□□□ 0
CPNE1-227ENST00000498056 KCND2Q9NZV8 630 aa15.06■□□□□ 0
CPNE1-227ENST00000498056 AKT3Q9Y243 479 aa15.06■□□□□ 0
CPNE1-227ENST00000498056 MBLAC1A4D2B0 266 aaPredicted RBP15.05■□□□□ -0
CPNE1-227ENST00000498056 RSPH10B2B2RC85 870 aa15.05■□□□□ -0
CPNE1-227ENST00000498056 GAS2O43903 313 aaKnown RBP15.05■□□□□ -0
CPNE1-227ENST00000498056 FAM13AO94988 1023 aa15.05■□□□□ -0
CPNE1-227ENST00000498056 RSPH10BP0C881 870 aa15.05■□□□□ -0
CPNE1-227ENST00000498056 IDEP14735 1019 aa15.05■□□□□ -0
CPNE1-227ENST00000498056 ADAM17P78536 824 aa15.05■□□□□ -0
CPNE1-227ENST00000498056 AMPD3Q01432 767 aa15.05■□□□□ -0
CPNE1-227ENST00000498056 DRP2Q13474 957 aa15.05■□□□□ -0
CPNE1-227ENST00000498056 POSTNQ15063 836 aa15.05■□□□□ -0
CPNE1-227ENST00000498056 KANK3Q6NY19 840 aa15.05■□□□□ -0
CPNE1-227ENST00000498056 C1orf186Q6ZWK4 172 aa15.05■□□□□ -0
CPNE1-227ENST00000498056 FAM126BQ8IXS8 530 aa15.05■□□□□ -0
CPNE1-227ENST00000498056 EXOC8Q8IYI6 725 aa15.05■□□□□ -0
CPNE1-227ENST00000498056 SLC43A3Q8NBI5 491 aa15.05■□□□□ -0
CPNE1-227ENST00000498056 DDX12PQ92771 950 aa15.05■□□□□ -0
CPNE1-227ENST00000498056 TIGD1Q96MW7 591 aa15.05■□□□□ -0
CPNE1-227ENST00000498056 SCLT1Q96NL6 688 aa15.05■□□□□ -0
CPNE1-227ENST00000498056 SEZ6LQ9BYH1 1024 aa15.05■□□□□ -0
CPNE1-227ENST00000498056 TRIM9Q9C026 710 aa15.05■□□□□ -0
CPNE1-227ENST00000498056 TRPV6Q9H1D0 765 aa15.05■□□□□ -0
CPNE1-227ENST00000498056 HOOK1Q9UJC3 728 aaKnown RBP15.05■□□□□ -0
CPNE1-227ENST00000498056 GTPBP6O43824 516 aaPredicted RBP15.04■□□□□ -0
CPNE1-227ENST00000498056 VTNP04004 478 aa15.04■□□□□ -0
CPNE1-227ENST00000498056 CTSHP09668 335 aa15.04■□□□□ -0
CPNE1-227ENST00000498056 GUCY2CP25092 1073 aa15.04■□□□□ -0
CPNE1-227ENST00000498056 TMOD1P28289 359 aa15.04■□□□□ -0
CPNE1-227ENST00000498056 DNM2P50570 870 aa15.04■□□□□ -0
CPNE1-227ENST00000498056 TMEM62Q0P6H9 643 aa15.04■□□□□ -0
CPNE1-227ENST00000498056 PNOCQ13519 176 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms