RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 EVPLQ92817 2033 aa12.62□□□□□ -0.39
ERCC8-208ENST00000497892 SZT2Q5T011 3432 aa12.62□□□□□ -0.39
ERCC8-208ENST00000497892 SMIM35A0A1B0GVV1 85 aa12.62□□□□□ -0.39
ERCC8-208ENST00000497892 RSPH10B2B2RC85 870 aa12.62□□□□□ -0.39
ERCC8-208ENST00000497892 NBNO60934 754 aa12.62□□□□□ -0.39
ERCC8-208ENST00000497892 STBD1O95210 358 aa12.62□□□□□ -0.39
ERCC8-208ENST00000497892 C22orf31O95567 290 aa12.62□□□□□ -0.39
ERCC8-208ENST00000497892 CXCL10P02778 98 aa12.62□□□□□ -0.39
ERCC8-208ENST00000497892 CTSHP09668 335 aa12.62□□□□□ -0.39
ERCC8-208ENST00000497892 RSPH10BP0C881 870 aa12.62□□□□□ -0.39
ERCC8-208ENST00000497892 TXKP42681 527 aa12.62□□□□□ -0.39
ERCC8-208ENST00000497892 QARSP47897 775 aaKnown RBP12.62□□□□□ -0.39
ERCC8-208ENST00000497892 FXR1P51114 621 aaKnown RBP eCLIP12.62□□□□□ -0.39
ERCC8-208ENST00000497892 PSMC5P62195 406 aa12.62□□□□□ -0.39
ERCC8-208ENST00000497892 EPHA7Q15375 998 aa12.62□□□□□ -0.39
ERCC8-208ENST00000497892 ZNF174Q15697 407 aa12.62□□□□□ -0.39
ERCC8-208ENST00000497892 XKR3Q5GH77 459 aa12.62□□□□□ -0.39
ERCC8-208ENST00000497892 FAM26DQ5JW98 314 aa12.62□□□□□ -0.39
ERCC8-208ENST00000497892 NCAPH2Q6IBW4 605 aa12.62□□□□□ -0.39
ERCC8-208ENST00000497892 DEFB128Q7Z7B8 93 aa12.62□□□□□ -0.39
ERCC8-208ENST00000497892 RSPH3Q86UC2 560 aa12.62□□□□□ -0.39
ERCC8-208ENST00000497892 DNAJB3Q8WWF6 145 aa12.62□□□□□ -0.39
ERCC8-208ENST00000497892 HERVK_113Q902F9 699 aa12.62□□□□□ -0.39
ERCC8-208ENST00000497892 PCDHB6Q9Y5E3 794 aa12.62□□□□□ -0.39
ERCC8-208ENST00000497892 VPS37CA5D8V6 355 aaPredicted RBP12.61□□□□□ -0.39
ERCC8-208ENST00000497892 SOX1O00570 391 aaPredicted RBP12.61□□□□□ -0.39
ERCC8-208ENST00000497892 DKC1O60832 514 aaKnown RBP eCLIP12.61□□□□□ -0.39
ERCC8-208ENST00000497892 FGBP02675 491 aa12.61□□□□□ -0.39
ERCC8-208ENST00000497892 P4HBP07237 508 aaKnown RBP12.61□□□□□ -0.39
ERCC8-208ENST00000497892 SYT1P21579 422 aa12.61□□□□□ -0.39
ERCC8-208ENST00000497892 KLRC1P26715 233 aa12.61□□□□□ -0.39
ERCC8-208ENST00000497892 MGAT3Q09327 533 aa12.61□□□□□ -0.39
ERCC8-208ENST00000497892 TARBP2Q15633 366 aaKnown RBP12.61□□□□□ -0.39
ERCC8-208ENST00000497892 OTOP2Q7RTS6 562 aa12.61□□□□□ -0.39
ERCC8-208ENST00000497892 TRMT1LQ7Z2T5 733 aaKnown RBP12.61□□□□□ -0.39
ERCC8-208ENST00000497892 BRAPQ7Z569 592 aa12.61□□□□□ -0.39
ERCC8-208ENST00000497892 C4orf32Q8N8J7 132 aa12.61□□□□□ -0.39
ERCC8-208ENST00000497892 NEK9Q8TD19 979 aa12.61□□□□□ -0.39
ERCC8-208ENST00000497892 LXNQ9BS40 222 aa12.61□□□□□ -0.39
ERCC8-208ENST00000497892 NIFKQ9BYG3 293 aaKnown RBP12.61□□□□□ -0.39
ERCC8-208ENST00000497892 FAM49AQ9H0Q0 323 aaPredicted RBP12.61□□□□□ -0.39
ERCC8-208ENST00000497892 MTIF3Q9H2K0 278 aaKnown RBP12.61□□□□□ -0.39
ERCC8-208ENST00000497892 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.61□□□□□ -0.39
ERCC8-208ENST00000497892 NRBP2Q9NSY0 501 aa12.61□□□□□ -0.39
ERCC8-208ENST00000497892 WRAP73Q9P2S5 460 aaPredicted RBP12.61□□□□□ -0.39
ERCC8-208ENST00000497892 SEPT9Q9UHD8 586 aaPredicted RBP12.61□□□□□ -0.39
ERCC8-208ENST00000497892 MICAL3Q7RTP6 2002 aa12.61□□□□□ -0.39
ERCC8-208ENST00000497892 PTPRSQ13332 1948 aa12.6□□□□□ -0.39
ERCC8-208ENST00000497892 LOXHD1Q8IVV2 1947 aa12.6□□□□□ -0.39
ERCC8-208ENST00000497892 GBF1Q92538 1859 aa12.6□□□□□ -0.39
ERCC8-208ENST00000497892 LAD1O00515 517 aa12.6□□□□□ -0.39
ERCC8-208ENST00000497892 MAGEB2O15479 319 aa12.6□□□□□ -0.39
ERCC8-208ENST00000497892 CHRNA1P02708 482 aa12.6□□□□□ -0.39
ERCC8-208ENST00000497892 ACTN1P12814 892 aa12.6□□□□□ -0.39
ERCC8-208ENST00000497892 MRPS6P82932 125 aaKnown RBP12.6□□□□□ -0.39
ERCC8-208ENST00000497892 CYP4A11Q02928 519 aa12.6□□□□□ -0.39
ERCC8-208ENST00000497892 PTGDRQ13258 359 aa12.6□□□□□ -0.39
ERCC8-208ENST00000497892 ANO5Q75V66 913 aa12.6□□□□□ -0.39
ERCC8-208ENST00000497892 C4orf19Q8IY42 314 aa12.6□□□□□ -0.39
ERCC8-208ENST00000497892 LINC01465Q8N7H1 131 aa12.6□□□□□ -0.39
ERCC8-208ENST00000497892 HSD17B14Q9BPX1 270 aa12.6□□□□□ -0.39
ERCC8-208ENST00000497892 EIF2AK1Q9BQI3 630 aaKnown RBP12.6□□□□□ -0.39
ERCC8-208ENST00000497892 FTOQ9C0B1 505 aaKnown RBP eCLIP12.6□□□□□ -0.39
ERCC8-208ENST00000497892 RGL1Q9NZL6 768 aa12.6□□□□□ -0.39
ERCC8-208ENST00000497892 CXXC1Q9P0U4 656 aaPredicted RBP12.6□□□□□ -0.39
ERCC8-208ENST00000497892 MYH15Q9Y2K3 1946 aa12.6□□□□□ -0.39
ERCC8-208ENST00000497892 TMEM150BA6NC51 233 aa12.59□□□□□ -0.39
ERCC8-208ENST00000497892 MAP3K7O43318 606 aa12.59□□□□□ -0.39
ERCC8-208ENST00000497892 BAIAP3O94812 1187 aa12.59□□□□□ -0.39
ERCC8-208ENST00000497892 SLITRK3O94933 977 aa12.59□□□□□ -0.39
ERCC8-208ENST00000497892 PRPHP41219 470 aa12.59□□□□□ -0.39
ERCC8-208ENST00000497892 TMEM266Q2M3C6 531 aa12.59□□□□□ -0.39
ERCC8-208ENST00000497892 PLEKHG4Q58EX7 1191 aa12.59□□□□□ -0.39
ERCC8-208ENST00000497892 IER5Q5VY09 327 aa12.59□□□□□ -0.39
ERCC8-208ENST00000497892 CNKSR3Q6P9H4 555 aa12.59□□□□□ -0.39
ERCC8-208ENST00000497892 FERMT3Q86UX7 667 aa12.59□□□□□ -0.39
ERCC8-208ENST00000497892 KIAA0319LQ8IZA0 1049 aa12.59□□□□□ -0.39
ERCC8-208ENST00000497892 NME8Q8N427 588 aa12.59□□□□□ -0.39
ERCC8-208ENST00000497892 DYDC2Q96IM9 177 aa12.59□□□□□ -0.39
ERCC8-208ENST00000497892 CEP89Q96ST8 783 aa12.59□□□□□ -0.39
ERCC8-208ENST00000497892 ZSWIM4Q9H7M6 989 aa12.59□□□□□ -0.39
ERCC8-208ENST00000497892 WDR70Q9NW82 654 aa12.59□□□□□ -0.39
ERCC8-208ENST00000497892 MTMR6Q9Y217 621 aa12.59□□□□□ -0.39
ERCC8-208ENST00000497892 CDY2AQ9Y6F7 541 aa12.59□□□□□ -0.39
ERCC8-208ENST00000497892 KDM3AQ9Y4C1 1321 aa12.59□□□□□ -0.39
ERCC8-208ENST00000497892 DDX11L8A8MPP1 907 aa12.58□□□□□ -0.4
ERCC8-208ENST00000497892 LYPLA2O95372 231 aa12.58□□□□□ -0.4
ERCC8-208ENST00000497892 HSP90AA1P07900 732 aaKnown RBP12.58□□□□□ -0.4
ERCC8-208ENST00000497892 YWHABP31946 246 aaKnown RBP12.58□□□□□ -0.4
ERCC8-208ENST00000497892 TECP42680 631 aa12.58□□□□□ -0.4
ERCC8-208ENST00000497892 SMAD3P84022 425 aaKnown RBP12.58□□□□□ -0.4
ERCC8-208ENST00000497892 ATP2C1P98194 919 aaPredicted RBP12.58□□□□□ -0.4
ERCC8-208ENST00000497892 TBC1D8BQ0IIM8 1120 aa12.58□□□□□ -0.4
ERCC8-208ENST00000497892 TMEM62Q0P6H9 643 aa12.58□□□□□ -0.4
ERCC8-208ENST00000497892 RESTQ13127 1097 aa12.58□□□□□ -0.4
ERCC8-208ENST00000497892 CTTNQ14247 550 aaKnown RBP12.58□□□□□ -0.4
ERCC8-208ENST00000497892 TCTN1Q2MV58 587 aa12.58□□□□□ -0.4
ERCC8-208ENST00000497892 TSR1Q2NL82 804 aaKnown RBP12.58□□□□□ -0.4
ERCC8-208ENST00000497892 MTERF2Q49AM1 385 aa12.58□□□□□ -0.4
ERCC8-208ENST00000497892 PLA2G4FQ68DD2 849 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms