RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 ANGEL2Q5VTE6 544 aaKnown RBP12.68□□□□□ -0.38
SNRNP200-208ENST00000497539 LRRC31Q6UY01 552 aa12.68□□□□□ -0.38
SNRNP200-208ENST00000497539 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.68□□□□□ -0.38
SNRNP200-208ENST00000497539 C1orf186Q6ZWK4 172 aa12.68□□□□□ -0.38
SNRNP200-208ENST00000497539 KLRG1Q96E93 195 aa12.68□□□□□ -0.38
SNRNP200-208ENST00000497539 NDST4Q9H3R1 872 aa12.68□□□□□ -0.38
SNRNP200-208ENST00000497539 MYO6Q9UM54 1294 aa12.68□□□□□ -0.38
SNRNP200-208ENST00000497539 LUC7L2Q9Y383 392 aaKnown RBP12.68□□□□□ -0.38
SNRNP200-208ENST00000497539 COL4A3BPQ9Y5P4 624 aa12.68□□□□□ -0.38
SNRNP200-208ENST00000497539 NFIBO00712 420 aa12.67□□□□□ -0.38
SNRNP200-208ENST00000497539 PPFIA2O75334 1257 aa12.67□□□□□ -0.38
SNRNP200-208ENST00000497539 ITGB5P18084 799 aa12.67□□□□□ -0.38
SNRNP200-208ENST00000497539 TBC1D8BQ0IIM8 1120 aa12.67□□□□□ -0.38
SNRNP200-208ENST00000497539 GSPT2Q8IYD1 628 aaKnown RBP12.67□□□□□ -0.38
SNRNP200-208ENST00000497539 GLIS3Q8NEA6 775 aa12.67□□□□□ -0.38
SNRNP200-208ENST00000497539 TRPM4Q8TD43 1214 aa12.67□□□□□ -0.38
SNRNP200-208ENST00000497539 TMEM174Q8WUU8 243 aa12.67□□□□□ -0.38
SNRNP200-208ENST00000497539 UPF1Q92900 1129 aaKnown RBP eCLIP12.67□□□□□ -0.388e-14■■□□□ 11.5
SNRNP200-208ENST00000497539 EEF2KMTQ96G04 330 aa12.67□□□□□ -0.38
SNRNP200-208ENST00000497539 NACC1Q96RE7 527 aa12.67□□□□□ -0.38
SNRNP200-208ENST00000497539 UNC45AQ9H3U1 944 aa12.67□□□□□ -0.38
SNRNP200-208ENST00000497539 PICK1Q9NRD5 415 aa12.67□□□□□ -0.38
SNRNP200-208ENST00000497539 ODF2LQ9ULJ1 636 aa12.67□□□□□ -0.38
SNRNP200-208ENST00000497539 POTEB2H3BUK9 544 aa12.67□□□□□ -0.38
SNRNP200-208ENST00000497539 PDXKO00764 312 aa12.67□□□□□ -0.38
SNRNP200-208ENST00000497539 DHX15O43143 795 aaKnown RBP12.67□□□□□ -0.38
SNRNP200-208ENST00000497539 ARP10275 920 aa12.67□□□□□ -0.38
SNRNP200-208ENST00000497539 HERC4Q5GLZ8 1057 aaPredicted RBP12.67□□□□□ -0.38
SNRNP200-208ENST00000497539 NAIF1Q69YI7 327 aaPredicted RBP12.67□□□□□ -0.38
SNRNP200-208ENST00000497539 RINT1Q6NUQ1 792 aa12.67□□□□□ -0.38
SNRNP200-208ENST00000497539 FGFBP2Q9BYJ0 223 aa12.67□□□□□ -0.38
SNRNP200-208ENST00000497539 TANGO6Q9C0B7 1094 aa12.67□□□□□ -0.38
SNRNP200-208ENST00000497539 RABEP2Q9H5N1 569 aa12.67□□□□□ -0.38
SNRNP200-208ENST00000497539 AGO4Q9HCK5 861 aaKnown RBP12.67□□□□□ -0.38
SNRNP200-208ENST00000497539 MYO1AQ9UBC5 1043 aa12.67□□□□□ -0.38
SNRNP200-208ENST00000497539 FAM184BQ9ULE4 1060 aa12.67□□□□□ -0.38
SNRNP200-208ENST00000497539 NPHP3-ACAD11A0A0J9YXS1 232 aa12.66□□□□□ -0.38
SNRNP200-208ENST00000497539 IPO5O00410 1097 aaKnown RBP12.66□□□□□ -0.38
SNRNP200-208ENST00000497539 FLOT1O75955 427 aa12.66□□□□□ -0.38
SNRNP200-208ENST00000497539 DSG3P32926 999 aa12.66□□□□□ -0.38
SNRNP200-208ENST00000497539 PABPC4Q13310 644 aaKnown RBP eCLIP12.66□□□□□ -0.381e-6■■■□□ 15.3
SNRNP200-208ENST00000497539 TRIM59Q8IWR1 403 aa12.66□□□□□ -0.38
SNRNP200-208ENST00000497539 CCDC26Q8TAB7 109 aa12.66□□□□□ -0.38
SNRNP200-208ENST00000497539 DYDC2Q96IM9 177 aa12.66□□□□□ -0.38
SNRNP200-208ENST00000497539 RUSC1Q9BVN2 902 aa12.66□□□□□ -0.38
SNRNP200-208ENST00000497539 PPP1R1BQ9UD71 204 aaPredicted RBP12.66□□□□□ -0.38
SNRNP200-208ENST00000497539 DBR1Q9UK59 544 aaKnown RBP12.66□□□□□ -0.38
SNRNP200-208ENST00000497539 LCTP09848 1927 aa12.66□□□□□ -0.38
SNRNP200-208ENST00000497539 SLC16A3O15427 465 aaKnown RBP12.66□□□□□ -0.38
SNRNP200-208ENST00000497539 SSBP05455 408 aaKnown RBP eCLIP12.66□□□□□ -0.38
SNRNP200-208ENST00000497539 KRT18P05783 430 aaKnown RBP12.66□□□□□ -0.38
SNRNP200-208ENST00000497539 LRRC41Q15345 812 aa12.66□□□□□ -0.38
SNRNP200-208ENST00000497539 SUPT20HL1Q3ZLR7 823 aa12.66□□□□□ -0.38
SNRNP200-208ENST00000497539 AP1ARQ63HQ0 302 aa12.66□□□□□ -0.38
SNRNP200-208ENST00000497539 WDR59Q6PJI9 974 aa12.66□□□□□ -0.38
SNRNP200-208ENST00000497539 CCDC170Q8IYT3 715 aa12.66□□□□□ -0.38
SNRNP200-208ENST00000497539 RDM1Q8NG50 284 aa12.66□□□□□ -0.38
SNRNP200-208ENST00000497539 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.66□□□□□ -0.385e-12■□□□□ 9
SNRNP200-208ENST00000497539 WRNIP1Q96S55 665 aa12.66□□□□□ -0.38
SNRNP200-208ENST00000497539 MMS19Q96T76 1030 aa12.66□□□□□ -0.38
SNRNP200-208ENST00000497539 RAVER2Q9HCJ3 691 aaKnown RBP12.66□□□□□ -0.38
SNRNP200-208ENST00000497539 REXO2Q9Y3B8 237 aaKnown RBP12.66□□□□□ -0.38
SNRNP200-208ENST00000497539 EIF3CLB5ME19 914 aaKnown RBP12.65□□□□□ -0.38
SNRNP200-208ENST00000497539 RNF40O75150 1001 aa12.65□□□□□ -0.38
SNRNP200-208ENST00000497539 RWDD2BP57060 319 aa12.65□□□□□ -0.38
SNRNP200-208ENST00000497539 KNOP1Q1ED39 458 aaKnown RBP12.65□□□□□ -0.38
SNRNP200-208ENST00000497539 TRIM74Q86UV6 250 aa12.65□□□□□ -0.38
SNRNP200-208ENST00000497539 TRIM73Q86UV7 250 aa12.65□□□□□ -0.38
SNRNP200-208ENST00000497539 SFR1Q86XK3 245 aa12.65□□□□□ -0.38
SNRNP200-208ENST00000497539 EIF3CQ99613 913 aaKnown RBP12.65□□□□□ -0.38
SNRNP200-208ENST00000497539 SENP7Q9BQF6 1050 aa12.65□□□□□ -0.38
SNRNP200-208ENST00000497539 BHMT2Q9H2M3 363 aa12.65□□□□□ -0.38
SNRNP200-208ENST00000497539 TBC1D22BQ9NU19 505 aa12.65□□□□□ -0.38
SNRNP200-208ENST00000497539 SOCS7O14512 581 aa12.65□□□□□ -0.38
SNRNP200-208ENST00000497539 ATP1A1P05023 1023 aaKnown RBP12.65□□□□□ -0.38
SNRNP200-208ENST00000497539 IVLP07476 585 aa12.65□□□□□ -0.38
SNRNP200-208ENST00000497539 MAPTP10636 758 aaKnown RBP12.65□□□□□ -0.38
SNRNP200-208ENST00000497539 HOXD13P35453 343 aa12.65□□□□□ -0.38
SNRNP200-208ENST00000497539 HIRAP54198 1017 aaPredicted RBP12.65□□□□□ -0.38
SNRNP200-208ENST00000497539 MRPS25P82663 173 aaKnown RBP12.65□□□□□ -0.38
SNRNP200-208ENST00000497539 MRPS9P82933 396 aaKnown RBP12.65□□□□□ -0.38
SNRNP200-208ENST00000497539 AMPD2Q01433 879 aa12.65□□□□□ -0.38
SNRNP200-208ENST00000497539 SPP2Q13103 211 aa12.65□□□□□ -0.38
SNRNP200-208ENST00000497539 PGM5Q15124 567 aa12.65□□□□□ -0.38
SNRNP200-208ENST00000497539 WHAMMP3Q1A5X7 153 aa12.65□□□□□ -0.38
SNRNP200-208ENST00000497539 FRMD5Q7Z6J6 570 aa12.65□□□□□ -0.38
SNRNP200-208ENST00000497539 FMNL3Q8IVF7 1028 aa12.65□□□□□ -0.38
SNRNP200-208ENST00000497539 TIPINQ9BVW5 301 aa12.65□□□□□ -0.38
SNRNP200-208ENST00000497539 KCNH7Q9NS40 1196 aa12.65□□□□□ -0.38
SNRNP200-208ENST00000497539 TYW1Q9NV66 732 aaKnown RBP12.65□□□□□ -0.38
SNRNP200-208ENST00000497539 GGA3Q9NZ52 723 aa12.65□□□□□ -0.38
SNRNP200-208ENST00000497539 RGL1Q9NZL6 768 aa12.65□□□□□ -0.38
SNRNP200-208ENST00000497539 AFG3L2Q9Y4W6 797 aa12.65□□□□□ -0.38
SNRNP200-208ENST00000497539 CALUO43852 315 aaPredicted RBP12.65□□□□□ -0.39
SNRNP200-208ENST00000497539 TBCAO75347 108 aaKnown RBP12.65□□□□□ -0.39
SNRNP200-208ENST00000497539 SYF2O95926 243 aaKnown RBP12.65□□□□□ -0.39
SNRNP200-208ENST00000497539 TUBB2AQ13885 445 aa12.65□□□□□ -0.39
SNRNP200-208ENST00000497539 CATSPERGQ6ZRH7 1159 aa12.65□□□□□ -0.39
SNRNP200-208ENST00000497539 PROCA1Q8NCQ7 364 aaPredicted RBP12.65□□□□□ -0.39
SNRNP200-208ENST00000497539 IL31RAQ8NI17 732 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms